RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 PVALEFA0A1B0GWK0 134 aa12.44□□□□□ -0.42
CPNE1-222ENST00000473373 OR6C75A6NL08 312 aa12.44□□□□□ -0.42
CPNE1-222ENST00000473373 M0QZQ0 153 aa12.44□□□□□ -0.42
CPNE1-222ENST00000473373 PPEF2O14830 753 aa12.44□□□□□ -0.42
CPNE1-222ENST00000473373 GFRA3O60609 400 aa12.44□□□□□ -0.42
CPNE1-222ENST00000473373 ATF2P15336 505 aa12.44□□□□□ -0.42
CPNE1-222ENST00000473373 PTPN2P17706 415 aa12.44□□□□□ -0.42
CPNE1-222ENST00000473373 TNNI1P19237 187 aa12.44□□□□□ -0.42
CPNE1-222ENST00000473373 AVPR2P30518 371 aa12.44□□□□□ -0.42
CPNE1-222ENST00000473373 PNPLA4P41247 253 aa12.44□□□□□ -0.42
CPNE1-222ENST00000473373 ALDH1A3P47895 512 aa12.44□□□□□ -0.42
CPNE1-222ENST00000473373 NTHL1P78549 312 aa12.44□□□□□ -0.42
CPNE1-222ENST00000473373 POU5F1Q01860 360 aaKnown RBP12.44□□□□□ -0.42
CPNE1-222ENST00000473373 TAF12Q16514 161 aa12.44□□□□□ -0.42
CPNE1-222ENST00000473373 LMBRD2Q68DH5 695 aaPredicted RBP12.44□□□□□ -0.42
CPNE1-222ENST00000473373 SLC8B1Q6J4K2 584 aa12.44□□□□□ -0.42
CPNE1-222ENST00000473373 CRELD2Q6UXH1 353 aaPredicted RBP12.44□□□□□ -0.42
CPNE1-222ENST00000473373 RTL10Q7L3V2 364 aa12.44□□□□□ -0.42
CPNE1-222ENST00000473373 EFCAB13Q8IY85 973 aa12.44□□□□□ -0.42
CPNE1-222ENST00000473373 GLIS3Q8NEA6 775 aa12.44□□□□□ -0.42
CPNE1-222ENST00000473373 ING5Q8WYH8 240 aa12.44□□□□□ -0.42
CPNE1-222ENST00000473373 ZNF707Q96C28 371 aaPredicted RBP12.44□□□□□ -0.42
CPNE1-222ENST00000473373 ASIC4Q96FT7 647 aa12.44□□□□□ -0.42
CPNE1-222ENST00000473373 PAGE5Q96GU1 130 aa12.44□□□□□ -0.42
CPNE1-222ENST00000473373 ZNF512Q96ME7 567 aaPredicted RBP12.44□□□□□ -0.42
CPNE1-222ENST00000473373 MYADMQ96S97 322 aa12.44□□□□□ -0.42
CPNE1-222ENST00000473373 CORO1BQ9BR76 489 aa12.44□□□□□ -0.42
CPNE1-222ENST00000473373 STRA6Q9BX79 667 aa12.44□□□□□ -0.42
CPNE1-222ENST00000473373 PDE11AQ9HCR9 933 aa12.44□□□□□ -0.42
CPNE1-222ENST00000473373 HCFC1R1Q9NWW0 138 aa12.44□□□□□ -0.42
CPNE1-222ENST00000473373 HSPBP1Q9NZL4 362 aa12.44□□□□□ -0.42
CPNE1-222ENST00000473373 IGSF9Q9P2J2 1179 aa12.44□□□□□ -0.42
CPNE1-222ENST00000473373 AGAP1Q9UPQ3 857 aa12.44□□□□□ -0.42
CPNE1-222ENST00000473373 ZDHHC9Q9Y397 364 aa12.44□□□□□ -0.42
CPNE1-222ENST00000473373 INSL5Q9Y5Q6 135 aa12.44□□□□□ -0.42
CPNE1-222ENST00000473373 MIA3Q5JRA6 1907 aa12.43□□□□□ -0.42
CPNE1-222ENST00000473373 H0Y858 1186 aa12.43□□□□□ -0.42
CPNE1-222ENST00000473373 EXOC3O60645 756 aa12.43□□□□□ -0.42
CPNE1-222ENST00000473373 HUS1O60921 280 aa12.43□□□□□ -0.42
CPNE1-222ENST00000473373 KIF20AO95235 890 aa12.43□□□□□ -0.42
CPNE1-222ENST00000473373 PDGFBP01127 241 aaPredicted RBP12.43□□□□□ -0.42
CPNE1-222ENST00000473373 ADRB2P07550 413 aa12.43□□□□□ -0.42
CPNE1-222ENST00000473373 OR4Q2P0C623 313 aa12.43□□□□□ -0.42
CPNE1-222ENST00000473373 DLATP10515 647 aaKnown RBP12.43□□□□□ -0.42
CPNE1-222ENST00000473373 TYMPP19971 482 aa12.43□□□□□ -0.42
CPNE1-222ENST00000473373 TWF1Q12792 350 aa12.43□□□□□ -0.42
CPNE1-222ENST00000473373 MYO1EQ12965 1108 aa12.43□□□□□ -0.42
CPNE1-222ENST00000473373 PLD1Q13393 1074 aa12.43□□□□□ -0.42
CPNE1-222ENST00000473373 TDGQ13569 410 aa12.43□□□□□ -0.42
CPNE1-222ENST00000473373 CYP4A22Q5TCH4 519 aa12.43□□□□□ -0.42
CPNE1-222ENST00000473373 CNNM4Q6P4Q7 775 aa12.43□□□□□ -0.42
CPNE1-222ENST00000473373 RNF19BQ6ZMZ0 732 aa12.43□□□□□ -0.42
CPNE1-222ENST00000473373 PDZD4Q76G19 769 aaPredicted RBP12.43□□□□□ -0.42
CPNE1-222ENST00000473373 ZSWIM2Q8NEG5 633 aa12.43□□□□□ -0.42
CPNE1-222ENST00000473373 ZNF507Q8TCN5 953 aa12.43□□□□□ -0.42
CPNE1-222ENST00000473373 RHOBTB2Q9BYZ6 727 aa12.43□□□□□ -0.42
CPNE1-222ENST00000473373 MTMR12Q9C0I1 747 aa12.43□□□□□ -0.42
CPNE1-222ENST00000473373 SLITRK6Q9H5Y7 841 aa12.43□□□□□ -0.42
CPNE1-222ENST00000473373 KCNK12Q9HB15 430 aa12.43□□□□□ -0.42
CPNE1-222ENST00000473373 AFF4Q9UHB7 1163 aaKnown RBP12.43□□□□□ -0.42
CPNE1-222ENST00000473373 ITGA11Q9UKX5 1188 aa12.43□□□□□ -0.42
CPNE1-222ENST00000473373 NOTCH4Q99466 2003 aa12.43□□□□□ -0.42
CPNE1-222ENST00000473373 KPNA7A9QM74 516 aa12.42□□□□□ -0.42
CPNE1-222ENST00000473373 PIRO00625 290 aa12.42□□□□□ -0.42
CPNE1-222ENST00000473373 ACTN4O43707 911 aaKnown RBP12.42□□□□□ -0.42
CPNE1-222ENST00000473373 PHACTR2O75167 634 aa12.42□□□□□ -0.42
CPNE1-222ENST00000473373 MYL1P05976 194 aa12.42□□□□□ -0.42
CPNE1-222ENST00000473373 RHOP08100 348 aa12.42□□□□□ -0.42
CPNE1-222ENST00000473373 MYL4P12829 197 aa12.42□□□□□ -0.42
CPNE1-222ENST00000473373 NDUFA8P51970 172 aa12.42□□□□□ -0.42
CPNE1-222ENST00000473373 EPHB3P54753 998 aa12.42□□□□□ -0.42
CPNE1-222ENST00000473373 RBP5P82980 135 aa12.42□□□□□ -0.42
CPNE1-222ENST00000473373 TSPY1Q01534 308 aa12.42□□□□□ -0.42
CPNE1-222ENST00000473373 PSMD2Q13200 908 aa12.42□□□□□ -0.42
CPNE1-222ENST00000473373 SNRNP35Q16560 246 aaKnown RBP12.42□□□□□ -0.42
CPNE1-222ENST00000473373 KNOP1Q1ED39 458 aaKnown RBP12.42□□□□□ -0.42
CPNE1-222ENST00000473373 KMT5BQ4FZB7 885 aa12.42□□□□□ -0.42
CPNE1-222ENST00000473373 MTSS1LQ765P7 747 aa12.42□□□□□ -0.42
CPNE1-222ENST00000473373 CBWD2Q8IUF1 395 aa12.42□□□□□ -0.42
CPNE1-222ENST00000473373 XXYLT1Q8NBI6 393 aa12.42□□□□□ -0.42
CPNE1-222ENST00000473373 ST13P5Q8NFI4 369 aaPredicted RBP12.42□□□□□ -0.42
CPNE1-222ENST00000473373 GOLGA5Q8TBA6 731 aa12.42□□□□□ -0.42
CPNE1-222ENST00000473373 RSAD2Q8WXG1 361 aa12.42□□□□□ -0.42
CPNE1-222ENST00000473373 CCDC127Q96BQ5 260 aa12.42□□□□□ -0.42
CPNE1-222ENST00000473373 SEPT5Q99719 369 aaPredicted RBP12.42□□□□□ -0.42
CPNE1-222ENST00000473373 ASAH2Q9NR71 780 aa12.42□□□□□ -0.42
CPNE1-222ENST00000473373 AGPAT3Q9NRZ7 376 aa12.42□□□□□ -0.42
CPNE1-222ENST00000473373 CDH7Q9ULB5 785 aa12.42□□□□□ -0.42
CPNE1-222ENST00000473373 ZFP37Q9Y6Q3 630 aaPredicted RBP12.42□□□□□ -0.42
CPNE1-222ENST00000473373 KMT2EQ8IZD2 1858 aa12.42□□□□□ -0.42
CPNE1-222ENST00000473373 ANO9A1A5B4 782 aa12.41□□□□□ -0.42
CPNE1-222ENST00000473373 ZNF197O14709 1029 aa12.41□□□□□ -0.42
CPNE1-222ENST00000473373 ABLIM3O94929 683 aa12.41□□□□□ -0.42
CPNE1-222ENST00000473373 OAZ2O95190 189 aa12.41□□□□□ -0.42
CPNE1-222ENST00000473373 SEC24AO95486 1093 aa12.41□□□□□ -0.42
CPNE1-222ENST00000473373 RPN1P04843 607 aaKnown RBP12.41□□□□□ -0.42
CPNE1-222ENST00000473373 CFHP08603 1231 aa12.41□□□□□ -0.42
CPNE1-222ENST00000473373 LAMP2P13473 410 aa12.41□□□□□ -0.42
CPNE1-222ENST00000473373 AARSP49588 968 aaKnown RBP eCLIP12.41□□□□□ -0.42
CPNE1-222ENST00000473373 CDR1P51861 262 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms