RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 CHRNB1P11230 501 aa12.19□□□□□ -0.46
ACTB-209ENST00000473257 PRPHP41219 470 aa12.19□□□□□ -0.46
ACTB-209ENST00000473257 MAGEA9P43362 315 aa12.19□□□□□ -0.46
ACTB-209ENST00000473257 EPHA5P54756 1037 aa12.19□□□□□ -0.46
ACTB-209ENST00000473257 CYP4F8P98187 520 aa12.19□□□□□ -0.46
ACTB-209ENST00000473257 ATP2C1P98194 919 aaPredicted RBP12.19□□□□□ -0.46
ACTB-209ENST00000473257 GRIN1Q05586 938 aa12.19□□□□□ -0.46
ACTB-209ENST00000473257 TNK2Q07912 1038 aa12.19□□□□□ -0.46
ACTB-209ENST00000473257 TMEM119Q4V9L6 283 aa12.19□□□□□ -0.46
ACTB-209ENST00000473257 JADE1Q6IE81 842 aa12.19□□□□□ -0.46
ACTB-209ENST00000473257 SLC39A4Q6P5W5 647 aa12.19□□□□□ -0.46
ACTB-209ENST00000473257 ZPBP2Q6X784 338 aa12.19□□□□□ -0.46
ACTB-209ENST00000473257 GAREM2Q75VX8 874 aa12.19□□□□□ -0.46
ACTB-209ENST00000473257 HAUS6Q7Z4H7 955 aa12.19□□□□□ -0.46
ACTB-209ENST00000473257 GPBP1Q86WP2 473 aa12.19□□□□□ -0.46
ACTB-209ENST00000473257 ARID3BQ8IVW6 561 aaPredicted RBP12.19□□□□□ -0.46
ACTB-209ENST00000473257 MFSD6LQ8IWD5 586 aa12.19□□□□□ -0.46
ACTB-209ENST00000473257 SYT2Q8N9I0 419 aaPredicted RBP12.19□□□□□ -0.46
ACTB-209ENST00000473257 BEST2Q8NFU1 509 aa12.19□□□□□ -0.46
ACTB-209ENST00000473257 OR10T2Q8NGX3 314 aa12.19□□□□□ -0.46
ACTB-209ENST00000473257 IRF7Q92985 503 aa12.19□□□□□ -0.46
ACTB-209ENST00000473257 CNTNAP3BQ96NU0 1288 aa12.19□□□□□ -0.46
ACTB-209ENST00000473257 REEP2Q9BRK0 252 aa12.19□□□□□ -0.46
ACTB-209ENST00000473257 MKNK1Q9BUB5 465 aa12.19□□□□□ -0.46
ACTB-209ENST00000473257 CNTNAP3Q9BZ76 1288 aa12.19□□□□□ -0.46
ACTB-209ENST00000473257 SH2B1Q9NRF2 756 aaPredicted RBP12.19□□□□□ -0.46
ACTB-209ENST00000473257 MTMR11A4FU01 709 aa12.18□□□□□ -0.46
ACTB-209ENST00000473257 ANKRD63C9JTQ0 380 aa12.18□□□□□ -0.46
ACTB-209ENST00000473257 HRO43593 1189 aa12.18□□□□□ -0.46
ACTB-209ENST00000473257 KRT37O76014 449 aa12.18□□□□□ -0.46
ACTB-209ENST00000473257 MICAL2O94851 1124 aa12.18□□□□□ -0.46
ACTB-209ENST00000473257 NMT1P30419 496 aaKnown RBP12.18□□□□□ -0.46
ACTB-209ENST00000473257 LRPAP1P30533 357 aa12.18□□□□□ -0.46
ACTB-209ENST00000473257 PXNP49023 591 aaPredicted RBP12.18□□□□□ -0.46
ACTB-209ENST00000473257 AARSP49588 968 aaKnown RBP eCLIP12.18□□□□□ -0.466e-51■□□□□ 10.8
ACTB-209ENST00000473257 LIG4P49917 911 aa12.18□□□□□ -0.46
ACTB-209ENST00000473257 KPNA1P52294 538 aaPredicted RBP12.18□□□□□ -0.46
ACTB-209ENST00000473257 SMTNP53814 917 aa12.18□□□□□ -0.46
ACTB-209ENST00000473257 NCKAP1LP55160 1127 aa12.18□□□□□ -0.46
ACTB-209ENST00000473257 MCM6Q14566 821 aa12.18□□□□□ -0.46
ACTB-209ENST00000473257 HYIQ5T013 277 aa12.18□□□□□ -0.46
ACTB-209ENST00000473257 SCARA3Q6AZY7 606 aa12.18□□□□□ -0.46
ACTB-209ENST00000473257 OVOS1Q6IE37 1185 aa12.18□□□□□ -0.46
ACTB-209ENST00000473257 CENPPQ6IPU0 288 aa12.18□□□□□ -0.46
ACTB-209ENST00000473257 USP37Q86T82 979 aa12.18□□□□□ -0.46
ACTB-209ENST00000473257 YAF2Q8IY57 180 aa12.18□□□□□ -0.46
ACTB-209ENST00000473257 GIPC2Q8TF65 315 aa12.18□□□□□ -0.46
ACTB-209ENST00000473257 SENP8Q96LD8 212 aa12.18□□□□□ -0.46
ACTB-209ENST00000473257 ZHX3Q9H4I2 956 aa12.18□□□□□ -0.46
ACTB-209ENST00000473257 C17orf75Q9HAS0 396 aa12.18□□□□□ -0.46
ACTB-209ENST00000473257 TRPV4Q9HBA0 871 aa12.18□□□□□ -0.46
ACTB-209ENST00000473257 GTSE1Q9NYZ3 720 aa12.18□□□□□ -0.46
ACTB-209ENST00000473257 FRYQ5TBA9 3013 aa12.17□□□□□ -0.46
ACTB-209ENST00000473257 ATG2BQ96BY7 2078 aa12.17□□□□□ -0.46
ACTB-209ENST00000473257 K7ENM7 598 aa12.17□□□□□ -0.46
ACTB-209ENST00000473257 LAD1O00515 517 aa12.17□□□□□ -0.46
ACTB-209ENST00000473257 HNRNPDLO14979 420 aaKnown RBP12.17□□□□□ -0.46
ACTB-209ENST00000473257 GDF9O60383 454 aa12.17□□□□□ -0.46
ACTB-209ENST00000473257 GABRR2P28476 465 aa12.17□□□□□ -0.46
ACTB-209ENST00000473257 CXCL12P48061 93 aa12.17□□□□□ -0.46
ACTB-209ENST00000473257 ACOT2P49753 483 aa12.17□□□□□ -0.46
ACTB-209ENST00000473257 EPHB3P54753 998 aa12.17□□□□□ -0.46
ACTB-209ENST00000473257 LILRA4P59901 499 aa12.17□□□□□ -0.46
ACTB-209ENST00000473257 PPP2R3AQ06190 1150 aa12.17□□□□□ -0.46
ACTB-209ENST00000473257 GPR17Q13304 367 aa12.17□□□□□ -0.46
ACTB-209ENST00000473257 PON2Q15165 354 aa12.17□□□□□ -0.46
ACTB-209ENST00000473257 CCDC6Q16204 474 aa12.17□□□□□ -0.46
ACTB-209ENST00000473257 SLC39A12Q504Y0 691 aa12.17□□□□□ -0.46
ACTB-209ENST00000473257 ZC2HC1CQ53FD0 456 aaPredicted RBP12.17□□□□□ -0.46
ACTB-209ENST00000473257 GPR158Q5T848 1215 aa12.17□□□□□ -0.46
ACTB-209ENST00000473257 PKN3Q6P5Z2 889 aa12.17□□□□□ -0.46
ACTB-209ENST00000473257 DNAJB7Q7Z6W7 309 aaPredicted RBP12.17□□□□□ -0.46
ACTB-209ENST00000473257 MYCT1Q8N699 235 aa12.17□□□□□ -0.46
ACTB-209ENST00000473257 CSGALNACT1Q8TDX6 532 aa12.17□□□□□ -0.46
ACTB-209ENST00000473257 DEPDC1BQ8WUY9 529 aa12.17□□□□□ -0.46
ACTB-209ENST00000473257 CDK5RAP3Q96JB5 506 aa12.17□□□□□ -0.46
ACTB-209ENST00000473257 SEPT5Q99719 369 aaPredicted RBP12.17□□□□□ -0.46
ACTB-209ENST00000473257 MSTO1Q9BUK6 570 aa12.17□□□□□ -0.46
ACTB-209ENST00000473257 ATXN3LQ9H3M9 355 aa12.17□□□□□ -0.46
ACTB-209ENST00000473257 RPF1Q9H9Y2 349 aaKnown RBP12.17□□□□□ -0.46
ACTB-209ENST00000473257 BLOC1S4Q9NUP1 217 aa12.17□□□□□ -0.46
ACTB-209ENST00000473257 CDV3Q9UKY7 258 aaKnown RBP12.17□□□□□ -0.46
ACTB-209ENST00000473257 TBX20Q9UMR3 447 aa12.17□□□□□ -0.46
ACTB-209ENST00000473257 UBQLN1Q9UMX0 589 aaKnown RBP12.17□□□□□ -0.46
ACTB-209ENST00000473257 STK24Q9Y6E0 443 aa12.17□□□□□ -0.46
ACTB-209ENST00000473257 USP24Q9UPU5 2620 aa12.17□□□□□ -0.46
ACTB-209ENST00000473257 CFAP47Q6ZTR5 3102 aa12.17□□□□□ -0.46
ACTB-209ENST00000473257 SCN1AP35498 2009 aa12.16□□□□□ -0.46
ACTB-209ENST00000473257 OR6C75A6NL08 312 aa12.16□□□□□ -0.46
ACTB-209ENST00000473257 SPECC1L-ADORA2AF8WAN1 911 aa12.16□□□□□ -0.46
ACTB-209ENST00000473257 K7ESF4 209 aa12.16□□□□□ -0.46
ACTB-209ENST00000473257 OGTO15294 1046 aa12.16□□□□□ -0.46
ACTB-209ENST00000473257 ATF6P18850 670 aa12.16□□□□□ -0.46
ACTB-209ENST00000473257 KCNA4P22459 653 aa12.16□□□□□ -0.46
ACTB-209ENST00000473257 ALDH1A3P47895 512 aa12.16□□□□□ -0.46
ACTB-209ENST00000473257 GPR15P49685 360 aa12.16□□□□□ -0.46
ACTB-209ENST00000473257 PLD1Q13393 1074 aa12.16□□□□□ -0.46
ACTB-209ENST00000473257 KARSQ15046 597 aaKnown RBP12.16□□□□□ -0.46
ACTB-209ENST00000473257 CCDC142Q17RM4 750 aa12.16□□□□□ -0.46
ACTB-209ENST00000473257 C8orf34Q49A92 452 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms