RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 C1orf186Q6ZWK4 172 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 C1orf210Q8IVY1 113 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 SNIP1Q8TAD8 396 aaKnown RBP6.96□□□□□ -1.3
HDAC1-205ENST00000472928 HELQQ8TDG4 1101 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 MAP7D2Q96T17 732 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 SFXN1Q9H9B4 322 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 SLC39A2Q9NP94 309 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 ANKEF1Q9NU02 776 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 KCND2Q9NZV8 630 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 TBC1D7Q9P0N9 293 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 RWDD2AQ9UIY3 292 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 PRDM4Q9UKN5 801 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 ODF2LQ9ULJ1 636 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 CA14Q9ULX7 337 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 NFE2L3Q9Y4A8 694 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 COL4A3BPQ9Y5P4 624 aa6.96□□□□□ -1.3
HDAC1-205ENST00000472928 TRIP11Q15643 1979 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 TRIM49BA6NDI0 452 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 HBP1O60381 514 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 B4GALT3O60512 393 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 LRRN2O75325 713 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 VTNP04004 478 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 ADRB1P08588 477 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 SRFP11831 508 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 ATP4AP20648 1035 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 TGM1P22735 817 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 CA8P35219 290 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 PPP1R2P41236 205 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 SLC26A2P50443 739 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 CLCN4P51793 760 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 POLGP54098 1239 aaPredicted RBP6.95□□□□□ -1.3
HDAC1-205ENST00000472928 CCDC173Q0VFZ6 552 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 STK4Q13043 487 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 MAPK7Q13164 816 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 PSMD2Q13200 908 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 NCAPHQ15003 741 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 TLR1Q15399 786 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 PTPN14Q15678 1187 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 MTERF2Q49AM1 385 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 COBLL1Q53SF7 1204 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 HSP90AA4PQ58FG1 418 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 XKR3Q5GH77 459 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 CT47A1Q5JQC4 288 aaPredicted RBP6.95□□□□□ -1.3
HDAC1-205ENST00000472928 KIAA0319Q5VV43 1072 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 Q6ZVU0 165 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 ANO5Q75V66 913 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 DDX53Q86TM3 631 aaKnown RBP6.95□□□□□ -1.3
HDAC1-205ENST00000472928 ABI1Q8IZP0 508 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 SLC44A3Q8N4M1 653 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 LINC01465Q8N7H1 131 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 GLIS3Q8NEA6 775 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 ENOX1Q8TC92 643 aaKnown RBP6.95□□□□□ -1.3
HDAC1-205ENST00000472928 GPR152Q8TDT2 470 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 ITPKCQ96DU7 683 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 TMEM169Q96HH4 297 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 IGSF21Q96ID5 467 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 FAM167AQ96KS9 214 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 CEP170P1Q96L14 293 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 MED15Q96RN5 788 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 MYADMQ96S97 322 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 SH2D3AQ9BRG2 576 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 FGFBP2Q9BYJ0 223 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 PRKD2Q9BZL6 878 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 FOXQ1Q9C009 403 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 ADAMTS10Q9H324 1103 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 PARVGQ9HBI0 331 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 ARHGEF3Q9NR81 526 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 PLA2G2EQ9NZK7 142 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 EPS15L1Q9UBC2 864 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 SEL1LQ9UBV2 794 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 RALYQ9UKM9 306 aaKnown RBP6.95□□□□□ -1.3
HDAC1-205ENST00000472928 USP3Q9Y6I4 520 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 UBE4BO95155 1302 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 COL1A2P08123 1366 aa6.95□□□□□ -1.3
HDAC1-205ENST00000472928 DOCK6Q96HP0 2047 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 PDCD11Q14690 1871 aaKnown RBP6.94□□□□□ -1.3
HDAC1-205ENST00000472928 A0A0U1RQF3 1178 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 BICDL2A1A5D9 508 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 DCDC2BA2VCK2 349 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 J3QL48 77 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 K7ENM7 598 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 AP5Z1O43299 807 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 GDF9O60383 454 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 STBD1O95210 358 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 GCNT3O95395 438 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 ZIC2O95409 532 aaPredicted RBP6.94□□□□□ -1.3
HDAC1-205ENST00000472928 ADCY5O95622 1261 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 GALTP07902 379 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 MYBP10242 640 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 ATP1A3P13637 1013 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 CCNE1P24864 410 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 ALDH7A1P49419 539 aaKnown RBP6.94□□□□□ -1.3
HDAC1-205ENST00000472928 CLCN3P51790 818 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 ZNF75DP51815 510 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 CASP5P51878 434 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 ZNF131P52739 623 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 PMS1P54277 932 aaKnown RBP6.94□□□□□ -1.3
HDAC1-205ENST00000472928 PSMA6P60900 246 aaKnown RBP6.94□□□□□ -1.3
HDAC1-205ENST00000472928 EMC2Q15006 297 aa6.94□□□□□ -1.3
HDAC1-205ENST00000472928 ZNF484Q5JVG2 852 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms