RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 PALMO75781 387 aa15.58■□□□□ 0.08
HIF3A-206ENST00000472815 PRLRP16471 622 aa15.58■□□□□ 0.08
HIF3A-206ENST00000472815 TCP1P17987 556 aaKnown RBP15.58■□□□□ 0.08
HIF3A-206ENST00000472815 HADHBP55084 474 aaKnown RBP15.58■□□□□ 0.08
HIF3A-206ENST00000472815 TCEAL1Q15170 157 aa15.58■□□□□ 0.08
HIF3A-206ENST00000472815 SV2CQ496J9 727 aa15.58■□□□□ 0.08
HIF3A-206ENST00000472815 GLRA4Q5JXX5 417 aa15.58■□□□□ 0.08
HIF3A-206ENST00000472815 C9orf57Q5W0N0 161 aa15.58■□□□□ 0.08
HIF3A-206ENST00000472815 MRPL10Q7Z7H8 261 aaKnown RBP15.58■□□□□ 0.08
HIF3A-206ENST00000472815 PALB2Q86YC2 1186 aa15.58■□□□□ 0.08
HIF3A-206ENST00000472815 ZNF606Q8WXB4 792 aa15.58■□□□□ 0.08
HIF3A-206ENST00000472815 VCPIP1Q96JH7 1222 aa15.58■□□□□ 0.08
HIF3A-206ENST00000472815 PCDHB18PQ96TA0 734 aa15.58■□□□□ 0.08
HIF3A-206ENST00000472815 THAP2Q9H0W7 228 aa15.58■□□□□ 0.08
HIF3A-206ENST00000472815 TRPV6Q9H1D0 765 aa15.58■□□□□ 0.08
HIF3A-206ENST00000472815 AGO3Q9H9G7 860 aaKnown RBP15.58■□□□□ 0.08
HIF3A-206ENST00000472815 TAS2R14Q9NYV8 317 aa15.58■□□□□ 0.08
HIF3A-206ENST00000472815 UVRAGQ9P2Y5 699 aa15.58■□□□□ 0.08
HIF3A-206ENST00000472815 TUBGCP4Q9UGJ1 667 aa15.58■□□□□ 0.08
HIF3A-206ENST00000472815 SALL4Q9UJQ4 1053 aa15.58■□□□□ 0.08
HIF3A-206ENST00000472815 OGDHLQ9ULD0 1010 aa15.58■□□□□ 0.08
HIF3A-206ENST00000472815 KIAA1257Q9ULG3 409 aa15.58■□□□□ 0.08
HIF3A-206ENST00000472815 BARX2Q9UMQ3 279 aaPredicted RBP15.58■□□□□ 0.08
HIF3A-206ENST00000472815 POLIQ9UNA4 740 aa15.58■□□□□ 0.08
HIF3A-206ENST00000472815 ENC1O14682 589 aa15.57■□□□□ 0.08
HIF3A-206ENST00000472815 CYP1A1P04798 512 aaPredicted RBP15.57■□□□□ 0.08
HIF3A-206ENST00000472815 TAF6P49848 677 aa15.57■□□□□ 0.08
HIF3A-206ENST00000472815 GUCY2FP51841 1108 aa15.57■□□□□ 0.08
HIF3A-206ENST00000472815 CENPCQ03188 943 aa15.57■□□□□ 0.08
HIF3A-206ENST00000472815 CKAP4Q07065 602 aaKnown RBP15.57■□□□□ 0.08
HIF3A-206ENST00000472815 INCA1Q0VD86 236 aa15.57■□□□□ 0.08
HIF3A-206ENST00000472815 LIN9Q5TKA1 542 aa15.57■□□□□ 0.08
HIF3A-206ENST00000472815 TPCN2Q8NHX9 752 aa15.57■□□□□ 0.08
HIF3A-206ENST00000472815 SLC35G2Q8TBE7 412 aa15.57■□□□□ 0.08
HIF3A-206ENST00000472815 FTHL17Q9BXU8 183 aa15.57■□□□□ 0.08
HIF3A-206ENST00000472815 RNF39Q9H2S5 420 aa15.57■□□□□ 0.08
HIF3A-206ENST00000472815 CTTNBP2NLQ9P2B4 639 aa15.57■□□□□ 0.08
HIF3A-206ENST00000472815 HYOU1Q9Y4L1 999 aa15.57■□□□□ 0.08
HIF3A-206ENST00000472815 A0A0U1RQF3 1178 aa15.57■□□□□ 0.08
HIF3A-206ENST00000472815 CILPO75339 1184 aa15.57■□□□□ 0.08
HIF3A-206ENST00000472815 MYCP01106 439 aaPredicted RBP15.57■□□□□ 0.08
HIF3A-206ENST00000472815 ATP1A1P05023 1023 aaKnown RBP15.57■□□□□ 0.08
HIF3A-206ENST00000472815 THP07101 528 aa15.57■□□□□ 0.08
HIF3A-206ENST00000472815 UNGP13051 313 aaPredicted RBP15.57■□□□□ 0.08
HIF3A-206ENST00000472815 CDK7P50613 346 aa15.57■□□□□ 0.08
HIF3A-206ENST00000472815 STILQ15468 1287 aa15.57■□□□□ 0.08
HIF3A-206ENST00000472815 ZNF394Q53GI3 561 aa15.57■□□□□ 0.08
HIF3A-206ENST00000472815 TMEM35BQ8NCS4 154 aa15.57■□□□□ 0.08
HIF3A-206ENST00000472815 MSANTD4Q8NCY6 345 aa15.57■□□□□ 0.08
HIF3A-206ENST00000472815 C18orf25Q96B23 403 aaPredicted RBP15.57■□□□□ 0.08
HIF3A-206ENST00000472815 ZNF653Q96CK0 615 aa15.57■□□□□ 0.08
HIF3A-206ENST00000472815 TMEM176AQ96HP8 235 aa15.57■□□□□ 0.08
HIF3A-206ENST00000472815 SMYD3Q9H7B4 428 aa15.57■□□□□ 0.08
HIF3A-206ENST00000472815 SNX12Q9UMY4 172 aa15.57■□□□□ 0.08
HIF3A-206ENST00000472815 PCDHGC3Q9UN70 934 aa15.57■□□□□ 0.08
HIF3A-206ENST00000472815 SNX9Q9Y5X1 595 aa15.57■□□□□ 0.08
HIF3A-206ENST00000472815 PIRO00625 290 aa15.56■□□□□ 0.08
HIF3A-206ENST00000472815 CD19P15391 556 aa15.56■□□□□ 0.08
HIF3A-206ENST00000472815 SELPP16109 830 aa15.56■□□□□ 0.08
HIF3A-206ENST00000472815 LRPAP1P30533 357 aa15.56■□□□□ 0.08
HIF3A-206ENST00000472815 AMPD2Q01433 879 aa15.56■□□□□ 0.08
HIF3A-206ENST00000472815 DSC3Q14574 896 aa15.56■□□□□ 0.08
HIF3A-206ENST00000472815 DAAM2Q86T65 1068 aa15.56■□□□□ 0.08
HIF3A-206ENST00000472815 PPP1R10Q96QC0 940 aaKnown RBP15.56■□□□□ 0.08
HIF3A-206ENST00000472815 ADAM2Q99965 735 aa15.56■□□□□ 0.08
HIF3A-206ENST00000472815 NT5C1AQ9BXI3 368 aa15.56■□□□□ 0.08
HIF3A-206ENST00000472815 AVENQ9NQS1 362 aaPredicted RBP15.56■□□□□ 0.08
HIF3A-206ENST00000472815 SCN1AP35498 2009 aa15.56■□□□□ 0.08
HIF3A-206ENST00000472815 GRID2IPA4D2P6 1211 aa15.55■□□□□ 0.08
HIF3A-206ENST00000472815 KPNA7A9QM74 516 aa15.55■□□□□ 0.08
HIF3A-206ENST00000472815 PITPNM1O00562 1244 aa15.55■□□□□ 0.08
HIF3A-206ENST00000472815 MTA2O94776 668 aa15.55■□□□□ 0.08
HIF3A-206ENST00000472815 CYP1A2P05177 515 aa15.55■□□□□ 0.08
HIF3A-206ENST00000472815 VDRP11473 427 aa15.55■□□□□ 0.08
HIF3A-206ENST00000472815 CAPN2P17655 700 aa15.55■□□□□ 0.08
HIF3A-206ENST00000472815 PAX3P23760 479 aa15.55■□□□□ 0.08
HIF3A-206ENST00000472815 MLH1P40692 756 aa15.55■□□□□ 0.08
HIF3A-206ENST00000472815 RAP1GAPP47736 663 aa15.55■□□□□ 0.08
HIF3A-206ENST00000472815 NOMO3P69849 1222 aa15.55■□□□□ 0.08
HIF3A-206ENST00000472815 C1QBPQ07021 282 aaKnown RBP15.55■□□□□ 0.08
HIF3A-206ENST00000472815 NAA35Q5VZE5 725 aa15.55■□□□□ 0.08
HIF3A-206ENST00000472815 SCARA3Q6AZY7 606 aa15.55■□□□□ 0.08
HIF3A-206ENST00000472815 LRRC8DQ7L1W4 858 aa15.55■□□□□ 0.08
HIF3A-206ENST00000472815 PEX26Q7Z412 305 aa15.55■□□□□ 0.08
HIF3A-206ENST00000472815 UNC93AQ86WB7 457 aa15.55■□□□□ 0.08
HIF3A-206ENST00000472815 FAM126BQ8IXS8 530 aa15.55■□□□□ 0.08
HIF3A-206ENST00000472815 CYFIP2Q96F07 1278 aa15.55■□□□□ 0.08
HIF3A-206ENST00000472815 RPGRIP1Q96KN7 1286 aa15.55■□□□□ 0.08
HIF3A-206ENST00000472815 RSAD1Q9HA92 442 aa15.55■□□□□ 0.08
HIF3A-206ENST00000472815 MRPL47Q9HD33 250 aaKnown RBP15.55■□□□□ 0.08
HIF3A-206ENST00000472815 GDAP2Q9NXN4 497 aa15.55■□□□□ 0.08
HIF3A-206ENST00000472815 RNF14Q9UBS8 474 aa15.55■□□□□ 0.08
HIF3A-206ENST00000472815 SCINQ9Y6U3 715 aa15.55■□□□□ 0.08
HIF3A-206ENST00000472815 DYNC1I1O14576 645 aa15.54■□□□□ 0.08
HIF3A-206ENST00000472815 CTIFO43310 598 aaKnown RBP15.54■□□□□ 0.08
HIF3A-206ENST00000472815 PARNO95453 639 aaKnown RBP15.54■□□□□ 0.08
HIF3A-206ENST00000472815 CALB1P05937 261 aa15.54■□□□□ 0.08
HIF3A-206ENST00000472815 RPL9P32969 192 aaKnown RBP15.54■□□□□ 0.08
HIF3A-206ENST00000472815 RAD23BP54727 409 aa15.54■□□□□ 0.08
HIF3A-206ENST00000472815 CDH8P55286 799 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms