RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 CA8P35219 290 aa18.05■□□□□ 0.48
CCM2-205ENST00000472223 LHX1P48742 406 aa18.05■□□□□ 0.48
CCM2-205ENST00000472223 AARSP49588 968 aaKnown RBP eCLIP18.05■□□□□ 0.48
CCM2-205ENST00000472223 GCNT1Q02742 428 aa18.05■□□□□ 0.48
CCM2-205ENST00000472223 TAP1Q03518 808 aa18.05■□□□□ 0.48
CCM2-205ENST00000472223 YWHAHQ04917 246 aaPredicted RBP18.05■□□□□ 0.48
CCM2-205ENST00000472223 UBE3AQ05086 875 aa18.05■□□□□ 0.48
CCM2-205ENST00000472223 KCNMA1Q12791 1236 aa18.05■□□□□ 0.48
CCM2-205ENST00000472223 CUL2Q13617 745 aa18.05■□□□□ 0.48
CCM2-205ENST00000472223 KLHDC7AQ5VTJ3 777 aa18.05■□□□□ 0.48
CCM2-205ENST00000472223 SCARA5Q6ZMJ2 495 aa18.05■□□□□ 0.48
CCM2-205ENST00000472223 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.05■□□□□ 0.48
CCM2-205ENST00000472223 PPFIBP1Q86W92 1011 aa18.05■□□□□ 0.48
CCM2-205ENST00000472223 FMNL3Q8IVF7 1028 aa18.05■□□□□ 0.48
CCM2-205ENST00000472223 TMEM130Q8N3G9 435 aa18.05■□□□□ 0.48
CCM2-205ENST00000472223 LMO3Q8TAP4 145 aa18.05■□□□□ 0.48
CCM2-205ENST00000472223 SPATA18Q8TC71 538 aa18.05■□□□□ 0.48
CCM2-205ENST00000472223 TATDN2Q93075 761 aa18.05■□□□□ 0.48
CCM2-205ENST00000472223 JAKMIP2Q96AA8 810 aa18.05■□□□□ 0.48
CCM2-205ENST00000472223 MRFAP1L1Q96HT8 127 aa18.05■□□□□ 0.48
CCM2-205ENST00000472223 SPAG5Q96R06 1193 aa18.05■□□□□ 0.48
CCM2-205ENST00000472223 C17orf80Q9BSJ5 609 aa18.05■□□□□ 0.48
CCM2-205ENST00000472223 TTPALQ9BTX7 342 aa18.05■□□□□ 0.48
CCM2-205ENST00000472223 MARCH5Q9NX47 278 aa18.05■□□□□ 0.48
CCM2-205ENST00000472223 LZTS1Q9Y250 596 aa18.05■□□□□ 0.48
CCM2-205ENST00000472223 KIAA1671Q9BY89 1806 aa18.05■□□□□ 0.48
CCM2-205ENST00000472223 FSD2A1L4K1 749 aa18.04■□□□□ 0.48
CCM2-205ENST00000472223 C5orf67F2Z3F1 127 aa18.04■□□□□ 0.48
CCM2-205ENST00000472223 H7C4K7 107 aa18.04■□□□□ 0.48
CCM2-205ENST00000472223 I3L4J1 428 aa18.04■□□□□ 0.48
CCM2-205ENST00000472223 SPTLC1O15269 473 aa18.04■□□□□ 0.48
CCM2-205ENST00000472223 SOD2P04179 222 aa18.04■□□□□ 0.48
CCM2-205ENST00000472223 ITGB1P05556 798 aa18.04■□□□□ 0.48
CCM2-205ENST00000472223 URODP06132 367 aa18.04■□□□□ 0.48
CCM2-205ENST00000472223 ZNF75DP51815 510 aa18.04■□□□□ 0.48
CCM2-205ENST00000472223 RAPGEF1Q13905 1077 aa18.04■□□□□ 0.48
CCM2-205ENST00000472223 TRIM14Q14142 442 aa18.04■□□□□ 0.48
CCM2-205ENST00000472223 SPECC1LQ69YQ0 1117 aa18.04■□□□□ 0.48
CCM2-205ENST00000472223 RRAGAQ7L523 313 aa18.04■□□□□ 0.48
CCM2-205ENST00000472223 ADGRF2Q8IZF7 708 aa18.04■□□□□ 0.48
CCM2-205ENST00000472223 OR6B3Q8NGW1 331 aa18.04■□□□□ 0.48
CCM2-205ENST00000472223 ARNTL2Q8WYA1 636 aa18.04■□□□□ 0.48
CCM2-205ENST00000472223 OXCT2Q9BYC2 517 aaPredicted RBP18.04■□□□□ 0.48
CCM2-205ENST00000472223 DNAJC12Q9UKB3 198 aa18.04■□□□□ 0.48
CCM2-205ENST00000472223 POLIQ9UNA4 740 aa18.04■□□□□ 0.48
CCM2-205ENST00000472223 SIK3Q9Y2K2 1263 aa18.04■□□□□ 0.48
CCM2-205ENST00000472223 ITIH6Q6UXX5 1313 aa18.03■□□□□ 0.48
CCM2-205ENST00000472223 F8W810 466 aa18.03■□□□□ 0.48
CCM2-205ENST00000472223 TACC1O75410 805 aa18.03■□□□□ 0.48
CCM2-205ENST00000472223 ADCY5O95622 1261 aa18.03■□□□□ 0.48
CCM2-205ENST00000472223 UCHL3P15374 230 aa18.03■□□□□ 0.48
CCM2-205ENST00000472223 CD58P19256 250 aa18.03■□□□□ 0.48
CCM2-205ENST00000472223 GNL1P36915 607 aaPredicted RBP18.03■□□□□ 0.48
CCM2-205ENST00000472223 GLUD2P49448 558 aa18.03■□□□□ 0.48
CCM2-205ENST00000472223 POLR2FP61218 127 aaKnown RBP18.03■□□□□ 0.48
CCM2-205ENST00000472223 CREMQ03060 361 aa18.03■□□□□ 0.48
CCM2-205ENST00000472223 GPM6BQ13491 265 aa18.03■□□□□ 0.48
CCM2-205ENST00000472223 ARHGAP44Q17R89 818 aa18.03■□□□□ 0.48
CCM2-205ENST00000472223 TSR1Q2NL82 804 aaKnown RBP18.03■□□□□ 0.48
CCM2-205ENST00000472223 OVOS1Q6IE37 1185 aa18.03■□□□□ 0.48
CCM2-205ENST00000472223 PHLDB3Q6NSJ2 640 aa18.03■□□□□ 0.48
CCM2-205ENST00000472223 ANKS3Q6ZW76 656 aa18.03■□□□□ 0.48
CCM2-205ENST00000472223 TMC7Q7Z402 723 aa18.03■□□□□ 0.48
CCM2-205ENST00000472223 VPS52Q8N1B4 723 aa18.03■□□□□ 0.48
CCM2-205ENST00000472223 MICAL1Q8TDZ2 1067 aa18.03■□□□□ 0.48
CCM2-205ENST00000472223 HERC2P3Q9BVR0 1158 aa18.03■□□□□ 0.48
CCM2-205ENST00000472223 GPR62Q9BZJ7 368 aa18.03■□□□□ 0.48
CCM2-205ENST00000472223 APOBEC3GQ9HC16 384 aaKnown RBP18.03■□□□□ 0.48
CCM2-205ENST00000472223 MRPL17Q9NRX2 175 aaKnown RBP18.03■□□□□ 0.48
CCM2-205ENST00000472223 FBXL5Q9UKA1 691 aa18.03■□□□□ 0.48
CCM2-205ENST00000472223 LRRN2O75325 713 aa18.02■□□□□ 0.48
CCM2-205ENST00000472223 CYP11A1P05108 521 aa18.02■□□□□ 0.48
CCM2-205ENST00000472223 WEE2P0C1S8 567 aa18.02■□□□□ 0.48
CCM2-205ENST00000472223 CCDC172P0C7W6 258 aa18.02■□□□□ 0.48
CCM2-205ENST00000472223 KRT5P13647 590 aa18.02■□□□□ 0.48
CCM2-205ENST00000472223 FGFR3P22607 806 aa18.02■□□□□ 0.48
CCM2-205ENST00000472223 PCSK1P29120 753 aa18.02■□□□□ 0.48
CCM2-205ENST00000472223 USP8P40818 1118 aa18.02■□□□□ 0.48
CCM2-205ENST00000472223 ASPAP45381 313 aa18.02■□□□□ 0.48
CCM2-205ENST00000472223 KLK7P49862 253 aa18.02■□□□□ 0.48
CCM2-205ENST00000472223 SOWAHAQ2M3V2 549 aa18.02■□□□□ 0.48
CCM2-205ENST00000472223 WSCD1Q658N2 575 aa18.02■□□□□ 0.48
CCM2-205ENST00000472223 SCARA3Q6AZY7 606 aa18.02■□□□□ 0.48
CCM2-205ENST00000472223 SMYD5Q6GMV2 418 aa18.02■□□□□ 0.48
CCM2-205ENST00000472223 PDE12Q6L8Q7 609 aaKnown RBP18.02■□□□□ 0.48
CCM2-205ENST00000472223 ZNF280DQ6N043 979 aa18.02■□□□□ 0.48
CCM2-205ENST00000472223 CD300LGQ6UXG3 332 aa18.02■□□□□ 0.48
CCM2-205ENST00000472223 TMEM173Q86WV6 379 aaPredicted RBP18.02■□□□□ 0.48
CCM2-205ENST00000472223 VSTM4Q8IW00 320 aa18.02■□□□□ 0.48
CCM2-205ENST00000472223 ARHGEF19Q8IW93 802 aa18.02■□□□□ 0.48
CCM2-205ENST00000472223 PDCL2Q8N4E4 241 aa18.02■□□□□ 0.48
CCM2-205ENST00000472223 BCO2Q9BYV7 579 aa18.02■□□□□ 0.48
CCM2-205ENST00000472223 EDEM3Q9BZQ6 932 aa18.02■□□□□ 0.48
CCM2-205ENST00000472223 CERS4Q9HA82 394 aa18.02■□□□□ 0.48
CCM2-205ENST00000472223 ENTPD7Q9NQZ7 604 aa18.02■□□□□ 0.48
CCM2-205ENST00000472223 CEP72Q9P209 647 aa18.02■□□□□ 0.48
CCM2-205ENST00000472223 L1RE1Q9UN81 338 aa18.02■□□□□ 0.48
CCM2-205ENST00000472223 PCDHB4Q9Y5E5 795 aa18.02■□□□□ 0.48
CCM2-205ENST00000472223 TIMM13Q9Y5L4 95 aaPredicted RBP18.02■□□□□ 0.48
CCM2-205ENST00000472223 A8MXQ7 604 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms