RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 IPPQ9Y573 584 aa12.9□□□□□ -0.34
IRF1-208ENST00000472045 VDRP11473 427 aa12.9□□□□□ -0.34
IRF1-208ENST00000472045 IRX4P78413 519 aa12.9□□□□□ -0.34
IRF1-208ENST00000472045 ORC1Q13415 861 aa12.9□□□□□ -0.34
IRF1-208ENST00000472045 PTPAQ15257 358 aa12.9□□□□□ -0.34
IRF1-208ENST00000472045 FAM171A1Q5VUB5 890 aa12.9□□□□□ -0.34
IRF1-208ENST00000472045 METTL5Q9NRN9 209 aaKnown RBP12.9□□□□□ -0.34
IRF1-208ENST00000472045 DDIT4Q9NX09 232 aa12.9□□□□□ -0.34
IRF1-208ENST00000472045 KIF13AQ9H1H9 1805 aa12.9□□□□□ -0.34
IRF1-208ENST00000472045 ATRNO75882 1429 aa12.9□□□□□ -0.35
IRF1-208ENST00000472045 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.9□□□□□ -0.35
IRF1-208ENST00000472045 CARNS1A5YM72 827 aa12.9□□□□□ -0.35
IRF1-208ENST00000472045 CCDC160A6NGH7 325 aa12.9□□□□□ -0.35
IRF1-208ENST00000472045 NOL3O60936 208 aaKnown RBP12.9□□□□□ -0.35
IRF1-208ENST00000472045 ATICP31939 592 aa12.9□□□□□ -0.35
IRF1-208ENST00000472045 ZNF177Q13360 481 aaPredicted RBP12.9□□□□□ -0.35
IRF1-208ENST00000472045 PLD1Q13393 1074 aa12.9□□□□□ -0.35
IRF1-208ENST00000472045 DGKZQ13574 1117 aa12.9□□□□□ -0.35
IRF1-208ENST00000472045 EPC2Q52LR7 807 aa12.9□□□□□ -0.35
IRF1-208ENST00000472045 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.9□□□□□ -0.35
IRF1-208ENST00000472045 TMEM117Q9H0C3 514 aa12.9□□□□□ -0.35
IRF1-208ENST00000472045 KRT82Q9NSB4 513 aa12.9□□□□□ -0.35
IRF1-208ENST00000472045 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.9□□□□□ -0.35
IRF1-208ENST00000472045 ITGA11Q9UKX5 1188 aa12.9□□□□□ -0.35
IRF1-208ENST00000472045 KCNN4O15554 427 aa12.89□□□□□ -0.35
IRF1-208ENST00000472045 TOB1P50616 345 aaPredicted RBP12.89□□□□□ -0.35
IRF1-208ENST00000472045 CCL23P55773 120 aa12.89□□□□□ -0.35
IRF1-208ENST00000472045 AMPD2Q01433 879 aa12.89□□□□□ -0.35
IRF1-208ENST00000472045 TWF1Q12792 350 aa12.89□□□□□ -0.35
IRF1-208ENST00000472045 SFSWAPQ12872 951 aaKnown RBP12.89□□□□□ -0.35
IRF1-208ENST00000472045 KLHDC7AQ5VTJ3 777 aa12.89□□□□□ -0.35
IRF1-208ENST00000472045 NECAB2Q7Z6G3 386 aa12.89□□□□□ -0.35
IRF1-208ENST00000472045 C1orf131Q8NDD1 294 aaKnown RBP12.89□□□□□ -0.35
IRF1-208ENST00000472045 TMC2Q8TDI7 906 aa12.89□□□□□ -0.35
IRF1-208ENST00000472045 EGFL8Q99944 293 aa12.89□□□□□ -0.35
IRF1-208ENST00000472045 NUF2Q9BZD4 464 aa12.89□□□□□ -0.35
IRF1-208ENST00000472045 AFF4Q9UHB7 1163 aaKnown RBP12.89□□□□□ -0.35
IRF1-208ENST00000472045 PSMD3O43242 534 aa12.89□□□□□ -0.35
IRF1-208ENST00000472045 ATP9BO43861 1147 aa12.89□□□□□ -0.35
IRF1-208ENST00000472045 USP2O75604 605 aaPredicted RBP12.89□□□□□ -0.35
IRF1-208ENST00000472045 CYP3A4P08684 503 aa12.89□□□□□ -0.35
IRF1-208ENST00000472045 ELNP15502 786 aa12.89□□□□□ -0.35
IRF1-208ENST00000472045 THEMIS2Q5TEJ8 643 aa12.89□□□□□ -0.35
IRF1-208ENST00000472045 PPHLN1Q8NEY8 458 aaKnown RBP12.89□□□□□ -0.35
IRF1-208ENST00000472045 C1orf54Q8WWF1 131 aa12.89□□□□□ -0.35
IRF1-208ENST00000472045 IGFLR1Q9H665 355 aa12.89□□□□□ -0.35
IRF1-208ENST00000472045 MED4Q9NPJ6 270 aa12.89□□□□□ -0.35
IRF1-208ENST00000472045 PACSIN2Q9UNF0 486 aaPredicted RBP12.89□□□□□ -0.35
IRF1-208ENST00000472045 SMIM10L2AP0DMW4 78 aa12.89□□□□□ -0.35
IRF1-208ENST00000472045 SMIM10L2BP0DMW5 78 aa12.89□□□□□ -0.35
IRF1-208ENST00000472045 SLURP2P0DP57 97 aa12.89□□□□□ -0.35
IRF1-208ENST00000472045 CACNA2D3Q8IZS8 1091 aa12.89□□□□□ -0.35
IRF1-208ENST00000472045 ULK4Q96C45 1275 aa12.89□□□□□ -0.35
IRF1-208ENST00000472045 RPRD1AQ96P16 312 aaPredicted RBP12.89□□□□□ -0.35
IRF1-208ENST00000472045 SSU72P8A0A1W2PR75 194 aa12.89□□□□□ -0.35
IRF1-208ENST00000472045 F5H5T6 163 aa12.89□□□□□ -0.35
IRF1-208ENST00000472045 ACKR2O00590 384 aa12.89□□□□□ -0.35
IRF1-208ENST00000472045 SLITRK3O94933 977 aa12.89□□□□□ -0.35
IRF1-208ENST00000472045 CYP24A1Q07973 514 aa12.89□□□□□ -0.35
IRF1-208ENST00000472045 GLE1Q53GS7 698 aaKnown RBP12.89□□□□□ -0.35
IRF1-208ENST00000472045 TATDN1Q6P1N9 297 aa12.89□□□□□ -0.35
IRF1-208ENST00000472045 RASSF3Q86WH2 238 aa12.89□□□□□ -0.35
IRF1-208ENST00000472045 SLC35G2Q8TBE7 412 aa12.89□□□□□ -0.35
IRF1-208ENST00000472045 CYFIP2Q96F07 1278 aa12.89□□□□□ -0.35
IRF1-208ENST00000472045 AP3B1O00203 1094 aa12.88□□□□□ -0.35
IRF1-208ENST00000472045 XYLBO75191 536 aa12.88□□□□□ -0.35
IRF1-208ENST00000472045 ESRRBO95718 433 aa12.88□□□□□ -0.35
IRF1-208ENST00000472045 AKT1P31749 480 aa12.88□□□□□ -0.35
IRF1-208ENST00000472045 CASP4P49662 377 aa12.88□□□□□ -0.35
IRF1-208ENST00000472045 BCAT1P54687 386 aa12.88□□□□□ -0.35
IRF1-208ENST00000472045 PSMC6P62333 389 aa12.88□□□□□ -0.35
IRF1-208ENST00000472045 MDH1BQ5I0G3 518 aa12.88□□□□□ -0.35
IRF1-208ENST00000472045 ZNF467Q7Z7K2 595 aaPredicted RBP12.88□□□□□ -0.35
IRF1-208ENST00000472045 RRAGDQ9NQL2 400 aaPredicted RBP12.88□□□□□ -0.35
IRF1-208ENST00000472045 PCDHB5Q9Y5E4 795 aa12.88□□□□□ -0.35
IRF1-208ENST00000472045 ADGRG1Q9Y653 693 aa12.88□□□□□ -0.35
IRF1-208ENST00000472045 M0QYT0 321 aa12.88□□□□□ -0.35
IRF1-208ENST00000472045 SATB1Q01826 763 aa12.88□□□□□ -0.35
IRF1-208ENST00000472045 RABGAP1LQ5R372 815 aa12.88□□□□□ -0.35
IRF1-208ENST00000472045 SH2D4BQ5SQS7 431 aa12.88□□□□□ -0.35
IRF1-208ENST00000472045 MAP3K21Q5TCX8 1036 aa12.88□□□□□ -0.35
IRF1-208ENST00000472045 ELOA2Q8IYF1 753 aaPredicted RBP12.88□□□□□ -0.35
IRF1-208ENST00000472045 SPIRE2Q8WWL2 714 aa12.88□□□□□ -0.35
IRF1-208ENST00000472045 OSBPL9Q96SU4 736 aa12.88□□□□□ -0.35
IRF1-208ENST00000472045 VPS11Q9H270 941 aa12.88□□□□□ -0.35
IRF1-208ENST00000472045 TSR3Q9UJK0 312 aaKnown RBP12.88□□□□□ -0.35
IRF1-208ENST00000472045 MAPTP10636 758 aaKnown RBP12.88□□□□□ -0.35
IRF1-208ENST00000472045 EIF3BP55884 814 aaKnown RBP12.88□□□□□ -0.35
IRF1-208ENST00000472045 KLHL38Q2WGJ6 581 aa12.88□□□□□ -0.35
IRF1-208ENST00000472045 RIN2Q8WYP3 895 aaPredicted RBP12.88□□□□□ -0.35
IRF1-208ENST00000472045 AGAP3Q96P47 875 aa12.88□□□□□ -0.35
IRF1-208ENST00000472045 DRC3Q9H069 523 aa12.88□□□□□ -0.35
IRF1-208ENST00000472045 WDCPQ9H6R7 721 aa12.88□□□□□ -0.35
IRF1-208ENST00000472045 CYP3A43Q9HB55 503 aa12.88□□□□□ -0.35
IRF1-208ENST00000472045 DDX43Q9NXZ2 648 aaKnown RBP12.88□□□□□ -0.35
IRF1-208ENST00000472045 NFU1Q9UMS0 254 aa12.88□□□□□ -0.35
IRF1-208ENST00000472045 CDY2AQ9Y6F7 541 aa12.88□□□□□ -0.35
IRF1-208ENST00000472045 CYTH3O43739 400 aa12.88□□□□□ -0.35
IRF1-208ENST00000472045 MRPS6P82932 125 aaKnown RBP12.88□□□□□ -0.35
IRF1-208ENST00000472045 SYTL3Q4VX76 610 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms