RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 PGLYRP2Q96PD5 576 aa20.78■□□□□ 0.92
SORT1-203ENST00000471996 ACO2Q99798 780 aaKnown RBP20.78■□□□□ 0.92
SORT1-203ENST00000471996 POLR3CQ9BUI4 534 aaPredicted RBP20.78■□□□□ 0.92
SORT1-203ENST00000471996 CRISPLD1Q9H336 500 aa20.78■□□□□ 0.92
SORT1-203ENST00000471996 ATXN3LQ9H3M9 355 aa20.78■□□□□ 0.92
SORT1-203ENST00000471996 POLD4Q9HCU8 107 aa20.78■□□□□ 0.92
SORT1-203ENST00000471996 DTNBO60941 627 aa20.77■□□□□ 0.92
SORT1-203ENST00000471996 OAZ2O95190 189 aa20.77■□□□□ 0.92
SORT1-203ENST00000471996 WEE1P30291 646 aa20.77■□□□□ 0.92
SORT1-203ENST00000471996 ALDH1A3P47895 512 aa20.77■□□□□ 0.92
SORT1-203ENST00000471996 PTPAQ15257 358 aa20.77■□□□□ 0.92
SORT1-203ENST00000471996 ELF2Q15723 593 aa20.77■□□□□ 0.92
SORT1-203ENST00000471996 GPR158Q5T848 1215 aa20.77■□□□□ 0.92
SORT1-203ENST00000471996 SH3PXD2AQ5TCZ1 1133 aa20.77■□□□□ 0.92
SORT1-203ENST00000471996 LRSAM1Q6UWE0 723 aa20.77■□□□□ 0.92
SORT1-203ENST00000471996 OXCT2Q9BYC2 517 aaPredicted RBP20.77■□□□□ 0.92
SORT1-203ENST00000471996 BRMS1Q9HCU9 246 aa20.77■□□□□ 0.92
SORT1-203ENST00000471996 ASB3Q9Y575 518 aa20.77■□□□□ 0.92
SORT1-203ENST00000471996 WDFY3Q8IZQ1 3526 aa20.77■□□□□ 0.91
SORT1-203ENST00000471996 FASNP49327 2511 aaKnown RBP20.76■□□□□ 0.91
SORT1-203ENST00000471996 SOBPA7XYQ1 873 aa20.76■□□□□ 0.91
SORT1-203ENST00000471996 RHOBTB1O94844 696 aa20.76■□□□□ 0.91
SORT1-203ENST00000471996 PRAMEF12O95522 483 aa20.76■□□□□ 0.91
SORT1-203ENST00000471996 FGF19O95750 216 aa20.76■□□□□ 0.91
SORT1-203ENST00000471996 CAVIN2O95810 425 aa20.76■□□□□ 0.91
SORT1-203ENST00000471996 TOP3BO95985 862 aaKnown RBP20.76■□□□□ 0.91
SORT1-203ENST00000471996 CREB5Q02930 508 aa20.76■□□□□ 0.91
SORT1-203ENST00000471996 YWHAHQ04917 246 aaPredicted RBP20.76■□□□□ 0.91
SORT1-203ENST00000471996 GRSF1Q12849 480 aaKnown RBP eCLIP20.76■□□□□ 0.91
SORT1-203ENST00000471996 FSTL4Q6MZW2 842 aa20.76■□□□□ 0.91
SORT1-203ENST00000471996 DNAJB7Q7Z6W7 309 aaPredicted RBP20.76■□□□□ 0.91
SORT1-203ENST00000471996 KIFAP3Q92845 792 aa20.76■□□□□ 0.91
SORT1-203ENST00000471996 TMEM60Q9H2L4 133 aa20.76■□□□□ 0.91
SORT1-203ENST00000471996 LAMA1P25391 3075 aa20.75■□□□□ 0.91
SORT1-203ENST00000471996 IGF2RP11717 2491 aa20.75■□□□□ 0.91
SORT1-203ENST00000471996 BCLAF3A2AJT9 711 aaKnown RBP20.75■□□□□ 0.91
SORT1-203ENST00000471996 M0QZQ0 153 aa20.75■□□□□ 0.91
SORT1-203ENST00000471996 MEFVO15553 781 aaPredicted RBP20.75■□□□□ 0.91
SORT1-203ENST00000471996 OR4Q2P0C623 313 aa20.75■□□□□ 0.91
SORT1-203ENST00000471996 CEACAM1P13688 526 aa20.75■□□□□ 0.91
SORT1-203ENST00000471996 RPA1P27694 616 aa20.75■□□□□ 0.91
SORT1-203ENST00000471996 GABRR2P28476 465 aa20.75■□□□□ 0.91
SORT1-203ENST00000471996 GPR17Q13304 367 aa20.75■□□□□ 0.91
SORT1-203ENST00000471996 ARHGAP15Q53QZ3 475 aa20.75■□□□□ 0.91
SORT1-203ENST00000471996 PSMG2Q969U7 264 aa20.75■□□□□ 0.91
SORT1-203ENST00000471996 SCNM1Q9BWG6 230 aa20.75■□□□□ 0.91
SORT1-203ENST00000471996 POLR3BQ9NW08 1133 aaPredicted RBP20.75■□□□□ 0.91
SORT1-203ENST00000471996 THG1LQ9NWX6 298 aaKnown RBP20.75■□□□□ 0.91
SORT1-203ENST00000471996 LNP1A1A4G5 178 aa20.74■□□□□ 0.91
SORT1-203ENST00000471996 TRDMT1O14717 391 aaKnown RBP20.74■□□□□ 0.91
SORT1-203ENST00000471996 REC8O95072 547 aa20.74■□□□□ 0.91
SORT1-203ENST00000471996 MCF2P10911 925 aa20.74■□□□□ 0.91
SORT1-203ENST00000471996 CSRP1P21291 193 aaKnown RBP20.74■□□□□ 0.91
SORT1-203ENST00000471996 MCM2P49736 904 aa20.74■□□□□ 0.91
SORT1-203ENST00000471996 RING1Q06587 406 aa20.74■□□□□ 0.91
SORT1-203ENST00000471996 CENPPQ6IPU0 288 aa20.74■□□□□ 0.91
SORT1-203ENST00000471996 WASF1Q92558 559 aa20.74■□□□□ 0.91
SORT1-203ENST00000471996 HHIPQ96QV1 700 aa20.74■□□□□ 0.91
SORT1-203ENST00000471996 TARS2Q9BW92 718 aaKnown RBP20.74■□□□□ 0.91
SORT1-203ENST00000471996 MRPL4Q9BYD3 311 aaKnown RBP20.74■□□□□ 0.91
SORT1-203ENST00000471996 TM6SF1Q9BZW5 370 aa20.74■□□□□ 0.91
SORT1-203ENST00000471996 TASP1Q9H6P5 420 aa20.74■□□□□ 0.91
SORT1-203ENST00000471996 GKN1Q9NS71 199 aa20.74■□□□□ 0.91
SORT1-203ENST00000471996 ORC3Q9UBD5 711 aaPredicted RBP20.74■□□□□ 0.91
SORT1-203ENST00000471996 SLC27A5Q9Y2P5 690 aa20.74■□□□□ 0.91
SORT1-203ENST00000471996 TIMM13Q9Y5L4 95 aaPredicted RBP20.74■□□□□ 0.91
SORT1-203ENST00000471996 SPAG17Q6Q759 2223 aa20.74■□□□□ 0.91
SORT1-203ENST00000471996 PHLPP2Q6ZVD8 1323 aa20.74■□□□□ 0.91
SORT1-203ENST00000471996 TRIP11Q15643 1979 aa20.74■□□□□ 0.91
SORT1-203ENST00000471996 OR6C75A6NL08 312 aa20.73■□□□□ 0.91
SORT1-203ENST00000471996 DCLK1O15075 740 aa20.73■□□□□ 0.91
SORT1-203ENST00000471996 RNF40O75150 1001 aa20.73■□□□□ 0.91
SORT1-203ENST00000471996 CTDNEP1O95476 244 aa20.73■□□□□ 0.91
SORT1-203ENST00000471996 PROZP22891 400 aa20.73■□□□□ 0.91
SORT1-203ENST00000471996 KARSQ15046 597 aaKnown RBP20.73■□□□□ 0.91
SORT1-203ENST00000471996 CHFRQ96EP1 664 aa20.73■□□□□ 0.91
SORT1-203ENST00000471996 FAM83CQ9BQN1 747 aa20.73■□□□□ 0.91
SORT1-203ENST00000471996 TCHPQ9BT92 498 aa20.73■□□□□ 0.91
SORT1-203ENST00000471996 TMEM134Q9H6X4 195 aa20.73■□□□□ 0.91
SORT1-203ENST00000471996 PDRG1Q9NUG6 133 aa20.73■□□□□ 0.91
SORT1-203ENST00000471996 LHX6Q9UPM6 363 aa20.73■□□□□ 0.91
SORT1-203ENST00000471996 BTBD18B2RXH4 712 aa20.72■□□□□ 0.91
SORT1-203ENST00000471996 ABLIM1O14639 778 aa20.72■□□□□ 0.91
SORT1-203ENST00000471996 EGFP01133 1207 aa20.72■□□□□ 0.91
SORT1-203ENST00000471996 RUNX3Q13761 415 aa20.72■□□□□ 0.91
SORT1-203ENST00000471996 SLC10A6Q3KNW5 377 aa20.72■□□□□ 0.91
SORT1-203ENST00000471996 ITIH5Q86UX2 942 aa20.72■□□□□ 0.91
SORT1-203ENST00000471996 ATAD1Q8NBU5 361 aa20.72■□□□□ 0.91
SORT1-203ENST00000471996 ERMNQ8TAM6 284 aa20.72■□□□□ 0.91
SORT1-203ENST00000471996 ZCCHC14Q8WYQ9 949 aaKnown RBP20.72■□□□□ 0.91
SORT1-203ENST00000471996 TMEM9BQ9NQ34 198 aa20.72■□□□□ 0.91
SORT1-203ENST00000471996 HPS4Q9NQG7 708 aa20.72■□□□□ 0.91
SORT1-203ENST00000471996 TUBGCP4Q9UGJ1 667 aa20.72■□□□□ 0.91
SORT1-203ENST00000471996 MTMR11A4FU01 709 aa20.71■□□□□ 0.91
SORT1-203ENST00000471996 CCDC169A6NNP5 214 aa20.71■□□□□ 0.91
SORT1-203ENST00000471996 PFKFB2O60825 505 aa20.71■□□□□ 0.91
SORT1-203ENST00000471996 NPTX2P47972 431 aa20.71■□□□□ 0.91
SORT1-203ENST00000471996 MPZL3Q6UWV2 235 aa20.71■□□□□ 0.91
SORT1-203ENST00000471996 TAS1R3Q7RTX0 852 aa20.71■□□□□ 0.91
SORT1-203ENST00000471996 USP37Q86T82 979 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms