RNA–Protein interactions for RNA: ENST00000471494.5

RNF220-208, Transcript of ring finger protein 220, humanhuman

TSL 5

Gene RNF220, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-208ENST00000471494 C7orf25Q9BPX7 421 aa25.3■■□□□ 1.64
RNF220-208ENST00000471494 PYM1Q9BRP8 204 aaKnown RBP25.3■■□□□ 1.64
RNF220-208ENST00000471494 PCIF1Q9H4Z3 704 aa25.3■■□□□ 1.64
RNF220-208ENST00000471494 DSEQ9UL01 958 aa25.3■■□□□ 1.64
RNF220-208ENST00000471494 YIPF1Q9Y548 306 aa25.3■■□□□ 1.64
RNF220-208ENST00000471494 KIAA0391O15091 583 aaKnown RBP25.29■■□□□ 1.64
RNF220-208ENST00000471494 CYP11A1P05108 521 aa25.29■■□□□ 1.64
RNF220-208ENST00000471494 RFX1P22670 979 aa25.29■■□□□ 1.64
RNF220-208ENST00000471494 CLCN5P51795 746 aa25.29■■□□□ 1.64
RNF220-208ENST00000471494 NUBP1P53384 320 aa25.29■■□□□ 1.64
RNF220-208ENST00000471494 GPR17Q13304 367 aa25.29■■□□□ 1.64
RNF220-208ENST00000471494 SV2CQ496J9 727 aa25.29■■□□□ 1.64
RNF220-208ENST00000471494 FAM26FQ5R3K3 315 aa25.29■■□□□ 1.64
RNF220-208ENST00000471494 METTL23Q86XA0 190 aa25.29■■□□□ 1.64
RNF220-208ENST00000471494 TMEM105Q8N8V8 129 aa25.29■■□□□ 1.64
RNF220-208ENST00000471494 ZNF512Q96ME7 567 aaPredicted RBP25.29■■□□□ 1.64
RNF220-208ENST00000471494 ZNF560Q96MR9 790 aa25.29■■□□□ 1.64
RNF220-208ENST00000471494 GDE1Q9NZC3 331 aa25.29■■□□□ 1.64
RNF220-208ENST00000471494 RCOR1Q9UKL0 485 aa25.29■■□□□ 1.64
RNF220-208ENST00000471494 CA14Q9ULX7 337 aa25.29■■□□□ 1.64
RNF220-208ENST00000471494 CYB561D2O14569 222 aa25.28■■□□□ 1.64
RNF220-208ENST00000471494 ZNF197O14709 1029 aa25.28■■□□□ 1.64
RNF220-208ENST00000471494 EIF3DO15371 548 aaKnown RBP eCLIP25.28■■□□□ 1.64
RNF220-208ENST00000471494 CEBPBP17676 345 aa25.28■■□□□ 1.64
RNF220-208ENST00000471494 WNT7BP56706 349 aa25.28■■□□□ 1.64
RNF220-208ENST00000471494 PLD1Q13393 1074 aa25.28■■□□□ 1.64
RNF220-208ENST00000471494 CYP4A22Q5TCH4 519 aa25.28■■□□□ 1.64
RNF220-208ENST00000471494 CWF19L1Q69YN2 538 aaKnown RBP25.28■■□□□ 1.64
RNF220-208ENST00000471494 PDZD4Q76G19 769 aaPredicted RBP25.28■■□□□ 1.64
RNF220-208ENST00000471494 GPD1LQ8N335 351 aa25.28■■□□□ 1.64
RNF220-208ENST00000471494 GPR152Q8TDT2 470 aa25.28■■□□□ 1.64
RNF220-208ENST00000471494 CACTINQ8WUQ7 758 aaKnown RBP25.28■■□□□ 1.64
RNF220-208ENST00000471494 MCRS1Q96EZ8 462 aa25.28■■□□□ 1.64
RNF220-208ENST00000471494 RPP25Q9BUL9 199 aaKnown RBP25.28■■□□□ 1.64
RNF220-208ENST00000471494 PNPLA4P41247 253 aa25.27■■□□□ 1.64
RNF220-208ENST00000471494 DUSP4Q13115 394 aa25.27■■□□□ 1.64
RNF220-208ENST00000471494 UNC13DQ70J99 1090 aa25.27■■□□□ 1.64
RNF220-208ENST00000471494 CEP57L1Q8IYX8 460 aa25.27■■□□□ 1.64
RNF220-208ENST00000471494 BLZF1Q9H2G9 400 aa25.27■■□□□ 1.64
RNF220-208ENST00000471494 SLC2A4RGQ9NR83 387 aa25.27■■□□□ 1.64
RNF220-208ENST00000471494 CEP72Q9P209 647 aa25.27■■□□□ 1.64
RNF220-208ENST00000471494 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.26■■□□□ 1.63
RNF220-208ENST00000471494 KPNA7A9QM74 516 aa25.26■■□□□ 1.63
RNF220-208ENST00000471494 NPR3P17342 541 aa25.26■■□□□ 1.63
RNF220-208ENST00000471494 POLR2BP30876 1174 aaKnown RBP25.26■■□□□ 1.63
RNF220-208ENST00000471494 HOXD11P31277 338 aaPredicted RBP25.26■■□□□ 1.63
RNF220-208ENST00000471494 TCF15Q12870 199 aa25.26■■□□□ 1.63
RNF220-208ENST00000471494 PRSS36Q5K4E3 855 aa25.26■■□□□ 1.63
RNF220-208ENST00000471494 THEM5Q8N1Q8 247 aa25.26■■□□□ 1.63
RNF220-208ENST00000471494 LEMD2Q8NC56 503 aa25.26■■□□□ 1.63
RNF220-208ENST00000471494 OR10T2Q8NGX3 314 aa25.26■■□□□ 1.63
RNF220-208ENST00000471494 KXD1Q9BQD3 176 aa25.26■■□□□ 1.63
RNF220-208ENST00000471494 PDE11AQ9HCR9 933 aa25.26■■□□□ 1.63
RNF220-208ENST00000471494 ASAH2Q9NR71 780 aa25.26■■□□□ 1.63
RNF220-208ENST00000471494 UBE4BO95155 1302 aa25.26■■□□□ 1.63
RNF220-208ENST00000471494 MTMR11A4FU01 709 aa25.25■■□□□ 1.63
RNF220-208ENST00000471494 KRBA1A5PL33 1030 aa25.25■■□□□ 1.63
RNF220-208ENST00000471494 STK25O00506 426 aa25.25■■□□□ 1.63
RNF220-208ENST00000471494 GALR2O43603 387 aaPredicted RBP25.25■■□□□ 1.63
RNF220-208ENST00000471494 VNN2O95498 520 aa25.25■■□□□ 1.63
RNF220-208ENST00000471494 ITGB3P05106 788 aa25.25■■□□□ 1.63
RNF220-208ENST00000471494 AOC1P19801 751 aa25.25■■□□□ 1.63
RNF220-208ENST00000471494 CASP1P29466 404 aa25.25■■□□□ 1.63
RNF220-208ENST00000471494 AFMP43652 599 aa25.25■■□□□ 1.63
RNF220-208ENST00000471494 EPHB3P54753 998 aa25.25■■□□□ 1.63
RNF220-208ENST00000471494 EPM2AIP1Q7L775 607 aaPredicted RBP25.25■■□□□ 1.63
RNF220-208ENST00000471494 C1orf127Q8N9H9 656 aa25.25■■□□□ 1.63
RNF220-208ENST00000471494 TCEAL4Q96EI5 215 aa25.25■■□□□ 1.63
RNF220-208ENST00000471494 TMEM209Q96SK2 561 aa25.25■■□□□ 1.63
RNF220-208ENST00000471494 CRISPLD1Q9H336 500 aa25.25■■□□□ 1.63
RNF220-208ENST00000471494 ARHGEF3Q9NR81 526 aa25.25■■□□□ 1.63
RNF220-208ENST00000471494 ITGA11Q9UKX5 1188 aa25.25■■□□□ 1.63
RNF220-208ENST00000471494 AGAP1Q9UPQ3 857 aa25.25■■□□□ 1.63
RNF220-208ENST00000471494 ZNF233A6NK53 670 aa25.24■■□□□ 1.63
RNF220-208ENST00000471494 MICAL2O94851 1124 aa25.24■■□□□ 1.63
RNF220-208ENST00000471494 TMEM191BP0C7N4 346 aa25.24■■□□□ 1.63
RNF220-208ENST00000471494 MYL4P12829 197 aa25.24■■□□□ 1.63
RNF220-208ENST00000471494 HOXD13P35453 343 aa25.24■■□□□ 1.63
RNF220-208ENST00000471494 ALDH1A3P47895 512 aa25.24■■□□□ 1.63
RNF220-208ENST00000471494 KRT85P78386 507 aa25.24■■□□□ 1.63
RNF220-208ENST00000471494 WSCD1Q658N2 575 aa25.24■■□□□ 1.63
RNF220-208ENST00000471494 CENPPQ6IPU0 288 aa25.24■■□□□ 1.63
RNF220-208ENST00000471494 HS6ST3Q8IZP7 471 aa25.24■■□□□ 1.63
RNF220-208ENST00000471494 ATAD1Q8NBU5 361 aa25.24■■□□□ 1.63
RNF220-208ENST00000471494 ZNF507Q8TCN5 953 aa25.24■■□□□ 1.63
RNF220-208ENST00000471494 RTP3Q9BQQ7 232 aa25.24■■□□□ 1.63
RNF220-208ENST00000471494 IRF2BPLQ9H1B7 796 aa25.24■■□□□ 1.63
RNF220-208ENST00000471494 HSPBP1Q9NZL4 362 aa25.24■■□□□ 1.63
RNF220-208ENST00000471494 MIA3Q5JRA6 1907 aa25.24■■□□□ 1.63
RNF220-208ENST00000471494 CCR2P41597 374 aa25.23■■□□□ 1.63
RNF220-208ENST00000471494 EPHA5P54756 1037 aa25.23■■□□□ 1.63
RNF220-208ENST00000471494 GPC5P78333 572 aa25.23■■□□□ 1.63
RNF220-208ENST00000471494 EHHADHQ08426 723 aa25.23■■□□□ 1.63
RNF220-208ENST00000471494 BFSP1Q12934 665 aa25.23■■□□□ 1.63
RNF220-208ENST00000471494 SLC39A12Q504Y0 691 aa25.23■■□□□ 1.63
RNF220-208ENST00000471494 LRRC52Q8N7C0 313 aa25.23■■□□□ 1.63
RNF220-208ENST00000471494 BORCS6Q96GS4 357 aa25.23■■□□□ 1.63
RNF220-208ENST00000471494 SPATA32Q96LK8 384 aa25.23■■□□□ 1.63
RNF220-208ENST00000471494 MTMR12Q9C0I1 747 aa25.23■■□□□ 1.63
RNF220-208ENST00000471494 ZCWPW1Q9H0M4 648 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms