RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 LARSQ9P2J5 1176 aaKnown RBP5.19□□□□□ -1.58
SF3B1-208ENST00000470268 ARHGAP28Q9P2N2 729 aa5.19□□□□□ -1.58
SF3B1-208ENST00000470268 SUCLA2Q9P2R7 463 aaPredicted RBP5.19□□□□□ -1.58
SF3B1-208ENST00000470268 WDR81Q562E7 1941 aa5.19□□□□□ -1.58
SF3B1-208ENST00000470268 A0A087WZ62 844 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 A0A0U1RQG5 324 aaPredicted RBP5.18□□□□□ -1.58
SF3B1-208ENST00000470268 SMIM35A0A1B0GVV1 85 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 TRIM49BA6NDI0 452 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 LRRIQ4A6NIV6 560 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 CCDC169A6NNP5 214 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 TISP43B9A030 160 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 GAS2O43903 313 aaKnown RBP5.18□□□□□ -1.58
SF3B1-208ENST00000470268 PRPF6O94906 941 aaKnown RBP5.18□□□□□ -1.58
SF3B1-208ENST00000470268 CD4P01730 458 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 GSTP1P09211 210 aaKnown RBP5.18□□□□□ -1.58
SF3B1-208ENST00000470268 SRGAP2CP0DJJ0 459 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 CCDC192P0DO97 292 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 GAP43P17677 238 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 GPC3P51654 580 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 NCKAP1LP55160 1127 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 NLRP11P59045 1033 aaKnown RBP5.18□□□□□ -1.58
SF3B1-208ENST00000470268 GTF2BQ00403 316 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 SNX17Q15036 470 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 PTGISQ16647 500 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 KIZQ2M2Z5 673 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 TRIM71Q2Q1W2 868 aaKnown RBP5.18□□□□□ -1.58
SF3B1-208ENST00000470268 ANO6Q4KMQ2 910 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 SNAP47Q5SQN1 464 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 SASS6Q6UVJ0 657 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 SLC39A5Q6ZMH5 540 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 HAUS6Q7Z4H7 955 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 NELFCDQ8IXH7 590 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 ADSSL1Q8N142 457 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 TCP11Q8WWU5 503 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 GATAD2BQ8WXI9 593 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 EEF2KMTQ96G04 330 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 KLHDC7BQ96G42 594 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 NLRP4Q96MN2 994 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 JPH2Q9BR39 696 aaPredicted RBP5.18□□□□□ -1.58
SF3B1-208ENST00000470268 FDXACB1Q9BRP7 624 aaPredicted RBP5.18□□□□□ -1.58
SF3B1-208ENST00000470268 LRRC3Q9BY71 257 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 ADAMTS10Q9H324 1103 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 KCTD10Q9H3F6 313 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 C17orf75Q9HAS0 396 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 CBX8Q9HC52 389 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 KMT5AQ9NQR1 393 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 KRT82Q9NSB4 513 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 RMND1Q9NWS8 449 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 SEL1LQ9UBV2 794 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 PRKAG2Q9UGJ0 569 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 AKT3Q9Y243 479 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 PCDHB5Q9Y5E4 795 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 ARID2Q68CP9 1835 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 ZMYM2Q9UBW7 1377 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 DENND3A2RUS2 1198 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 FAM221AA4D161 298 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 K7ENM7 598 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 GSC2O15499 205 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 TGFB1I1O43294 461 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 GCNT3O95395 438 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 CHRNA1P02708 482 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 GNAT1P11488 350 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 FSTP19883 344 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 FGFR4P22455 802 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 TMOD1P28289 359 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 NAMPTP43490 491 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 DNM2P50570 870 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 STX17P56962 302 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 PTENP60484 403 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 PTPN11Q06124 597 aaPredicted RBP5.18□□□□□ -1.58
SF3B1-208ENST00000470268 DMP1Q13316 513 aaPredicted RBP5.18□□□□□ -1.58
SF3B1-208ENST00000470268 MXD4Q14582 209 aaPredicted RBP5.18□□□□□ -1.58
SF3B1-208ENST00000470268 NCAPHQ15003 741 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 STX1AQ16623 288 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 BMT2Q1RMZ1 405 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 LRRC26Q2I0M4 334 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 TRIM60Q495X7 471 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 COBLL1Q53SF7 1204 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 CDCA2Q69YH5 1023 aaPredicted RBP5.18□□□□□ -1.58
SF3B1-208ENST00000470268 KLHL10Q6JEL2 608 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 TAF2Q6P1X5 1199 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 SLC39A4Q6P5W5 647 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 EXOC8Q8IYI6 725 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 TMEM130Q8N3G9 435 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 GUF1Q8N442 669 aaKnown RBP5.18□□□□□ -1.58
SF3B1-208ENST00000470268 MLKLQ8NB16 471 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 ZNF507Q8TCN5 953 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 GRIN3AQ8TCU5 1115 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 UBXN4Q92575 508 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 GAL3ST3Q96A11 431 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 MEGF10Q96KG7 1140 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 CCDC113Q9H0I3 377 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 ST6GALNAC4Q9H4F1 302 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 ANO10Q9NW15 660 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 BCCIPQ9P287 314 aaKnown RBP eCLIP5.18□□□□□ -1.58
SF3B1-208ENST00000470268 GINS2Q9Y248 185 aa5.18□□□□□ -1.58
SF3B1-208ENST00000470268 MYH9P35579 1960 aaKnown RBP5.17□□□□□ -1.58
SF3B1-208ENST00000470268 ANKRD63C9JTQ0 380 aa5.17□□□□□ -1.58
SF3B1-208ENST00000470268 ASAP2O43150 1006 aa5.17□□□□□ -1.58
SF3B1-208ENST00000470268 B4GALT5O43286 388 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms