RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 CD101Q93033 1021 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 PANX3Q96QZ0 392 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 RMI1Q9H9A7 625 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 KLHL11Q9NVR0 708 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 IL1RAPL1Q9NZN1 696 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 SPATA31A5Q5VU36 1347 aa10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 SPATA31A7Q8IWB4 1347 aa10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 ESYT2A0FGR8 921 aa10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 FSCN2O14926 492 aa10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 ZNF862O60290 1169 aa10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 RARBP10826 455 aa10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 HIRAP54198 1017 aaPredicted RBP10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 EPHB1P54762 984 aa10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 SH3BGRP55822 239 aaPredicted RBP10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 ARL4CP56559 192 aa10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 ASPHQ12797 758 aa10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 CBX3Q13185 183 aa10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 MPP3Q13368 585 aa10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 KIF22Q14807 665 aa10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 SLC47A2Q86VL8 602 aa10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 YIPF2Q9BWQ6 316 aa10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 ARHGEF38Q9NXL2 777 aa10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 HSFX1Q9UBD0 423 aa10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 MINPP1Q9UNW1 487 aa10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 CACNA1SQ13698 1873 aa10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 OATP04181 439 aa10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 PABPC4LP0CB38 370 aaKnown RBP10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 BGNP21810 368 aa10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 POLD1P28340 1107 aa10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 SERPINB6P35237 376 aa10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 DLG1Q12959 904 aa10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 TTBK2Q6IQ55 1244 aa10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 C3orf67Q6ZVT6 689 aa10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 NOP9Q86U38 636 aaKnown RBP10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 ULK2Q8IYT8 1036 aa10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 GSTCDQ8NEC7 633 aa10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 ERMNQ8TAM6 284 aa10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 OXNAD1Q96HP4 312 aaPredicted RBP10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 CYLDQ9NQC7 956 aa10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 DDX43Q9NXZ2 648 aaKnown RBP10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 ZNF148Q9UQR1 794 aa10.05□□□□□ -0.8
NHLRC3-203ENST00000470258 CHMP2AO43633 222 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 BMP3P12645 472 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 ETS1P14921 441 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 MAN1A1P33908 653 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 AQP4P55087 323 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 DLG4P78352 724 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 TRIP10Q15642 601 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 EPC2Q52LR7 807 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 SFT2D3Q587I9 215 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 LLGL2Q6P1M3 1020 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 ACAD11Q709F0 780 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 SHKBP1Q8TBC3 707 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 CELF1Q92879 486 aaKnown RBP10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 RILPQ96NA2 401 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 CATSPER2Q96P56 530 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 EURLQ9NYK6 297 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 PSMC3IPQ9P2W1 217 aaPredicted RBP10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 EMSYQ7Z589 1322 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 DLEC1Q9Y238 1755 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 CD58P19256 250 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 ALDH18A1P54886 795 aaKnown RBP10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 PLCB3Q01970 1234 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 GPS1Q13098 491 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 NCOA4Q13772 614 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 TBC1D10BQ4KMP7 808 aaPredicted RBP10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 CCDC24Q8N4L8 307 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 GLIS1Q8NBF1 620 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 RANBP17Q9H2T7 1088 aaKnown RBP10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 QTRT2Q9H974 415 aaKnown RBP10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 ZNF287Q9HBT7 754 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 STK32BQ9NY57 414 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 SENP1Q9P0U3 644 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 SLC7A8Q9UHI5 535 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 MTO1Q9Y2Z2 717 aaKnown RBP10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 SPATA31A1Q5TZJ5 1347 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 A0A1B0GUL6 1792 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 CCDC195A0A1B0GUA6 201 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 ERVV-1B6SEH8 477 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 SPECC1L-ADORA2AF8WAN1 911 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 TYROBPO43914 113 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 LDHBP07195 334 aaKnown RBP10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 CCDC166P0CW27 439 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 CETN1Q12798 172 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 MTA1Q13330 715 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 ZYXQ15942 572 aaKnown RBP10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 TRMT5Q32P41 509 aaKnown RBP10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 HYIQ5T013 277 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 KLC3Q6P597 504 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 TRIM67Q6ZTA4 783 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 BBOF1Q8ND07 529 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 PIP4K2CQ8TBX8 421 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 PSPC1Q8WXF1 523 aaKnown RBP10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 USP6NLQ92738 828 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 FAM111AQ96PZ2 611 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 FHDC1Q9C0D6 1143 aaPredicted RBP10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 GRIP2Q9C0E4 1043 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 PAIP2BQ9ULR5 123 aaKnown RBP10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 RABGAP1Q9Y3P9 1069 aa10.04□□□□□ -0.8
NHLRC3-203ENST00000470258 SBF2Q86WG5 1849 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms