RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 TSC2P49815 1807 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 SPDYE4A6NLX3 237 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 LRRIQ3A6PVS8 624 aaPredicted RBP9.2□□□□□ -0.94
SSBP1-208ENST00000469123 PPP1R3GB7ZBB8 358 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 TULP1O00294 542 aaPredicted RBP9.2□□□□□ -0.94
SSBP1-208ENST00000469123 BIN1O00499 593 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 CYB561D2O14569 222 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 PER2O15055 1255 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 PMM2O15305 246 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 TBC1D4O60343 1298 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 LETM1O95202 739 aaPredicted RBP9.2□□□□□ -0.94
SSBP1-208ENST00000469123 GLP2RO95838 553 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 HNRNPA1P09651 372 aaKnown RBP eCLIP9.2□□□□□ -0.94
SSBP1-208ENST00000469123 CCDC192P0DO97 292 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 TRIM21P19474 475 aaKnown RBP9.2□□□□□ -0.94
SSBP1-208ENST00000469123 BMP6P22004 513 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 KCNA5P22460 613 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 PCSK1P29120 753 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 LHX1P48742 406 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 GUCY2FP51841 1108 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 WNT7BP56706 349 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 NLRP12P59046 1061 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 MYL7Q01449 175 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 BIRC3Q13489 604 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 TJAP1Q5JTD0 557 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 KRT39Q6A163 491 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 KLHL10Q6JEL2 608 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 ANKRD54Q6NXT1 300 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 EP400NLQ6ZTU2 488 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 FAM114A1Q8IWE2 563 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 SMRP1Q8NCR6 262 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 OR5B17Q8NGF7 314 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 ZNF461Q8TAF7 563 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 GPT2Q8TD30 523 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 C2orf15Q8WU43 125 aaKnown RBP9.2□□□□□ -0.94
SSBP1-208ENST00000469123 AUTS2Q8WXX7 1259 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 HPDLQ96IR7 371 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 MSLNLQ96KJ4 702 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 RIPOR3Q96MK2 946 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 ASB2Q96Q27 587 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 POP1Q99575 1024 aaKnown RBP9.2□□□□□ -0.94
SSBP1-208ENST00000469123 CLSTN3Q9BQT9 956 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 DNAI2Q9GZS0 605 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 TMEM8AQ9HCN3 771 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 HSFX1Q9UBD0 423 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 PRKAG3Q9UGI9 489 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 ARMCX3Q9UH62 379 aaPredicted RBP9.2□□□□□ -0.94
SSBP1-208ENST00000469123 FBXL5Q9UKA1 691 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 FBXW11Q9UKB1 542 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 CTNND2Q9UQB3 1225 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 PCDHGC5Q9Y5F6 944 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 CDY1Q9Y6F8 540 aa9.2□□□□□ -0.94
SSBP1-208ENST00000469123 P4HA2O15460 535 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 TGM5O43548 720 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 XYLBO75191 536 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 TBX10O75333 385 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 TACC1O75410 805 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 C4BPAP04003 597 aaKnown RBP9.19□□□□□ -0.94
SSBP1-208ENST00000469123 ATF2P15336 505 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 CD44P16070 742 aaKnown RBP9.19□□□□□ -0.94
SSBP1-208ENST00000469123 ELF1P32519 619 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 OR1D2P34982 312 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 GTF2F1P35269 517 aaKnown RBP eCLIP9.19□□□□□ -0.94
SSBP1-208ENST00000469123 LTBRP36941 435 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 MTHFRP42898 656 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 CASP4P49662 377 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 MXI1P50539 228 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 MARSP56192 900 aaKnown RBP9.19□□□□□ -0.94
SSBP1-208ENST00000469123 TNNC1P63316 161 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 TSPY1Q01534 308 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 PLD1Q13393 1074 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 NCOA4Q13772 614 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 MAPRE1Q15691 268 aaKnown RBP9.19□□□□□ -0.94
SSBP1-208ENST00000469123 SGSM1Q2NKQ1 1148 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 KLHL40Q2TBA0 621 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 SKOR2Q2VWA4 1001 aaPredicted RBP9.19□□□□□ -0.94
SSBP1-208ENST00000469123 ZNF699Q32M78 642 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 CCDC40Q4G0X9 1142 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 LMBRD2Q68DH5 695 aaPredicted RBP9.19□□□□□ -0.94
SSBP1-208ENST00000469123 SMYD5Q6GMV2 418 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 ISM2Q6H9L7 571 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 LILRA6Q6PI73 481 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 SASS6Q6UVJ0 657 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 PRSS55Q6UWB4 352 aaPredicted RBP9.19□□□□□ -0.94
SSBP1-208ENST00000469123 LIMS2Q7Z4I7 341 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 DCP1BQ8IZD4 617 aaKnown RBP9.19□□□□□ -0.94
SSBP1-208ENST00000469123 TTC39CQ8N584 583 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 KREMEN2Q8NCW0 462 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 BORCS6Q96GS4 357 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 ACBD6Q9BR61 282 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 ADAM7Q9H2U9 754 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 MAN1C1Q9NR34 630 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 ANO10Q9NW15 660 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 CLEC1BQ9P126 229 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 AFF4Q9UHB7 1163 aaKnown RBP9.19□□□□□ -0.94
SSBP1-208ENST00000469123 SNX9Q9Y5X1 595 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 PTPRJQ12913 1337 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 PLXNA3P51805 1871 aa9.19□□□□□ -0.94
SSBP1-208ENST00000469123 COL6A3P12111 3177 aa9.18□□□□□ -0.94
SSBP1-208ENST00000469123 TRIM49BA6NDI0 452 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms