RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 DSEQ9UL01 958 aa8.71□□□□□ -1.02
HDAC6-216ENST00000468949 COQ4Q9Y3A0 265 aa8.71□□□□□ -1.02
HDAC6-216ENST00000468949 SNX9Q9Y5X1 595 aa8.71□□□□□ -1.02
HDAC6-216ENST00000468949 MRPL42Q9Y6G3 142 aaKnown RBP8.71□□□□□ -1.02
HDAC6-216ENST00000468949 ITIH6Q6UXX5 1313 aa8.71□□□□□ -1.02
HDAC6-216ENST00000468949 ANO9A1A5B4 782 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 TMEM189-UBE2V1I3L0A0 370 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 NRP1O14786 923 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 NRDCO43847 1150 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 VNN1O95497 513 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 STAU1O95793 577 aaKnown RBP8.7□□□□□ -1.02
HDAC6-216ENST00000468949 ASS1P00966 412 aaKnown RBP8.7□□□□□ -1.02
HDAC6-216ENST00000468949 CCDC172P0C7W6 258 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 KRT5P13647 590 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 SLC9A1P19634 815 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 PON1P27169 355 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 CDC25BP30305 580 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 USP8P40818 1118 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 SLC11A1P49279 550 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 POLR2FP61218 127 aaKnown RBP8.7□□□□□ -1.02
HDAC6-216ENST00000468949 HTRA4P83105 476 aaPredicted RBP8.7□□□□□ -1.02
HDAC6-216ENST00000468949 KRT17Q04695 432 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 CUL2Q13617 745 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 UPP1Q16831 310 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 SPOPLQ6IQ16 392 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 KIAA1841Q6NSI8 718 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 KCNT2Q6UVM3 1135 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 TMEM92Q6UXU6 159 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 APTXQ7Z2E3 356 aaKnown RBP8.7□□□□□ -1.02
HDAC6-216ENST00000468949 VSTM4Q8IW00 320 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 ADGRF2Q8IZF7 708 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 CRIPAKQ8N1N5 446 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 TTC39CQ8N584 583 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 COLGALT1Q8NBJ5 622 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 RABGGTAQ92696 567 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 SEMA4DQ92854 862 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 SAMD11Q96NU1 681 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 SNX25Q9H3E2 840 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 UBE2TQ9NPD8 197 aaPredicted RBP8.7□□□□□ -1.02
HDAC6-216ENST00000468949 PLCB1Q9NQ66 1216 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 ZNHIT6Q9NWK9 470 aaKnown RBP8.7□□□□□ -1.02
HDAC6-216ENST00000468949 SPG21Q9NZD8 308 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 CEP72Q9P209 647 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 CACNG4Q9UBN1 327 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 DNAJB4Q9UDY4 337 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 TTC3P53804 2025 aa8.7□□□□□ -1.02
HDAC6-216ENST00000468949 NLRC5Q86WI3 1866 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 NT5C1B-RDH14C9J2C7 533 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 PIRO00625 290 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 CYB561D2O14569 222 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 PPEF2O14830 753 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 LPXNO60711 386 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 LRRN2O75325 713 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 CST3P01034 146 aaPredicted RBP8.69□□□□□ -1.02
HDAC6-216ENST00000468949 URODP06132 367 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 GALTP07902 379 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 UCHL3P15374 230 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 CD58P19256 250 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 PBX3P40426 434 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 KLK7P49862 253 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 LILRA4P59901 499 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 MCCD1P59942 119 aaPredicted RBP8.69□□□□□ -1.02
HDAC6-216ENST00000468949 FOXK1P85037 733 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 GCNT1Q02742 428 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 TAP1Q03518 808 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 NAB2Q15742 525 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 PTPN21Q16825 1174 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 ARHGAP44Q17R89 818 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 KLHDC7AQ5VTJ3 777 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 FUT10Q6P4F1 479 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 RRAGAQ7L523 313 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 CEP57Q86XR8 500 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 CNGA4Q8IV77 575 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 PLPP6Q8IY26 295 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 THEM5Q8N1Q8 247 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 TOP6BLQ8N6T0 577 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 SPC24Q8NBT2 197 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 OR6B3Q8NGW1 331 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 FAXDC2Q96IV6 333 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 SENP8Q96LD8 212 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 PAAF1Q9BRP4 392 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 C11orf84Q9BUA3 381 aaPredicted RBP8.69□□□□□ -1.02
HDAC6-216ENST00000468949 NUCKS1Q9H1E3 243 aaKnown RBP8.69□□□□□ -1.02
HDAC6-216ENST00000468949 CWH43Q9H720 699 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 SMYD3Q9H7B4 428 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 VRTNQ9H8Y1 702 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 CYP3A43Q9HB55 503 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 RC3H2Q9HBD1 1191 aaKnown RBP8.69□□□□□ -1.02
HDAC6-216ENST00000468949 NLRC4Q9NPP4 1024 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 HCSTQ9UBK5 93 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 PUF60Q9UHX1 559 aaKnown RBP8.69□□□□□ -1.02
HDAC6-216ENST00000468949 DNAJC12Q9UKB3 198 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 POLIQ9UNA4 740 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 SIK3Q9Y2K2 1263 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 LUC7L2Q9Y383 392 aaKnown RBP8.69□□□□□ -1.02
HDAC6-216ENST00000468949 PCDHB4Q9Y5E5 795 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 FHOD1Q9Y613 1164 aa8.69□□□□□ -1.02
HDAC6-216ENST00000468949 TDRD15B5MCY1 1934 aaKnown RBP8.68□□□□□ -1.02
HDAC6-216ENST00000468949 LCHNA4D1U4 455 aa8.68□□□□□ -1.02
HDAC6-216ENST00000468949 AKR1B15C9JRZ8 316 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms