RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 SPTLC2O15270 562 aa23.56■■□□□ 1.36
TTC28-204ENST00000468807 CDR1P51861 262 aa23.56■■□□□ 1.36
TTC28-204ENST00000468807 EPHB3P54753 998 aa23.56■■□□□ 1.36
TTC28-204ENST00000468807 GPR17Q13304 367 aa23.56■■□□□ 1.36
TTC28-204ENST00000468807 PLD1Q13393 1074 aa23.56■■□□□ 1.36
TTC28-204ENST00000468807 FOXD4L6Q3SYB3 417 aaPredicted RBP23.56■■□□□ 1.36
TTC28-204ENST00000468807 POTEHQ6S545 545 aa23.56■■□□□ 1.36
TTC28-204ENST00000468807 CRELD2Q6UXH1 353 aaPredicted RBP23.56■■□□□ 1.36
TTC28-204ENST00000468807 FOXD4L3Q6VB84 417 aaPredicted RBP23.56■■□□□ 1.36
TTC28-204ENST00000468807 HSCBQ8IWL3 235 aa23.56■■□□□ 1.36
TTC28-204ENST00000468807 LINC00301Q8NCQ3 95 aa23.56■■□□□ 1.36
TTC28-204ENST00000468807 PJA1Q8NG27 643 aa23.56■■□□□ 1.36
TTC28-204ENST00000468807 TMEM209Q96SK2 561 aa23.56■■□□□ 1.36
TTC28-204ENST00000468807 PYM1Q9BRP8 204 aaKnown RBP23.56■■□□□ 1.36
TTC28-204ENST00000468807 STRA6Q9BX79 667 aa23.56■■□□□ 1.36
TTC28-204ENST00000468807 CRISPLD1Q9H336 500 aa23.56■■□□□ 1.36
TTC28-204ENST00000468807 SLITRK6Q9H5Y7 841 aa23.56■■□□□ 1.36
TTC28-204ENST00000468807 MORC2Q9Y6X9 1032 aaPredicted RBP23.56■■□□□ 1.36
TTC28-204ENST00000468807 COL4A3Q01955 1670 aa23.56■■□□□ 1.36
TTC28-204ENST00000468807 TSC2P49815 1807 aa23.56■■□□□ 1.36
TTC28-204ENST00000468807 MIA3Q5JRA6 1907 aa23.55■■□□□ 1.36
TTC28-204ENST00000468807 CFAP54Q96N23 3096 aa23.55■■□□□ 1.36
TTC28-204ENST00000468807 ANO9A1A5B4 782 aa23.55■■□□□ 1.36
TTC28-204ENST00000468807 NRG2O14511 850 aaPredicted RBP23.55■■□□□ 1.36
TTC28-204ENST00000468807 IL18RAPO95256 599 aa23.55■■□□□ 1.36
TTC28-204ENST00000468807 VNN2O95498 520 aa23.55■■□□□ 1.36
TTC28-204ENST00000468807 PAX3P23760 479 aa23.55■■□□□ 1.36
TTC28-204ENST00000468807 ALDH1A3P47895 512 aa23.55■■□□□ 1.36
TTC28-204ENST00000468807 TAF6P49848 677 aa23.55■■□□□ 1.36
TTC28-204ENST00000468807 STARD6P59095 220 aa23.55■■□□□ 1.36
TTC28-204ENST00000468807 MYBPC2Q14324 1141 aa23.55■■□□□ 1.36
TTC28-204ENST00000468807 GRM2Q14416 872 aa23.55■■□□□ 1.36
TTC28-204ENST00000468807 UBXN2BQ14CS0 331 aa23.55■■□□□ 1.36
TTC28-204ENST00000468807 FAM78AQ5JUQ0 283 aa23.55■■□□□ 1.36
TTC28-204ENST00000468807 METTL23Q86XA0 190 aa23.55■■□□□ 1.36
TTC28-204ENST00000468807 CCDC65Q8IXS2 484 aa23.55■■□□□ 1.36
TTC28-204ENST00000468807 EFCAB13Q8IY85 973 aa23.55■■□□□ 1.36
TTC28-204ENST00000468807 ATAD1Q8NBU5 361 aa23.55■■□□□ 1.36
TTC28-204ENST00000468807 ELSPBP1Q96BH3 223 aa23.55■■□□□ 1.36
TTC28-204ENST00000468807 FGFBP2Q9BYJ0 223 aa23.55■■□□□ 1.36
TTC28-204ENST00000468807 ZFP14Q9HCL3 533 aa23.55■■□□□ 1.36
TTC28-204ENST00000468807 OLFML3Q9NRN5 406 aa23.55■■□□□ 1.36
TTC28-204ENST00000468807 MTMR11A4FU01 709 aa23.54■■□□□ 1.36
TTC28-204ENST00000468807 CYB561D2O14569 222 aa23.54■■□□□ 1.36
TTC28-204ENST00000468807 LRRN2O75325 713 aa23.54■■□□□ 1.36
TTC28-204ENST00000468807 MICAL2O94851 1124 aa23.54■■□□□ 1.36
TTC28-204ENST00000468807 NBL1P41271 181 aa23.54■■□□□ 1.36
TTC28-204ENST00000468807 TFAMQ00059 246 aaKnown RBP23.54■■□□□ 1.36
TTC28-204ENST00000468807 PRKCQQ04759 706 aa23.54■■□□□ 1.36
TTC28-204ENST00000468807 TEAD2Q15562 447 aa23.54■■□□□ 1.36
TTC28-204ENST00000468807 SLC39A12Q504Y0 691 aa23.54■■□□□ 1.36
TTC28-204ENST00000468807 LEMD2Q8NC56 503 aa23.54■■□□□ 1.36
TTC28-204ENST00000468807 ZSWIM3Q96MP5 696 aa23.54■■□□□ 1.36
TTC28-204ENST00000468807 RBAKQ9NYW8 714 aaPredicted RBP23.54■■□□□ 1.36
TTC28-204ENST00000468807 DSEQ9UL01 958 aa23.54■■□□□ 1.36
TTC28-204ENST00000468807 WDR87Q6ZQQ6 2873 aa23.54■■□□□ 1.36
TTC28-204ENST00000468807 KANSL1LA0AUZ9 987 aa23.53■■□□□ 1.36
TTC28-204ENST00000468807 GOLGA8IPA6NC78 632 aa23.53■■□□□ 1.36
TTC28-204ENST00000468807 GOLGA8JA6NMD2 632 aa23.53■■□□□ 1.36
TTC28-204ENST00000468807 PROB1E7EW31 1015 aa23.53■■□□□ 1.36
TTC28-204ENST00000468807 SOAT2O75908 522 aa23.53■■□□□ 1.36
TTC28-204ENST00000468807 PRPF6O94906 941 aaKnown RBP23.53■■□□□ 1.36
TTC28-204ENST00000468807 CD72P21854 359 aa23.53■■□□□ 1.36
TTC28-204ENST00000468807 FCARP24071 287 aa23.53■■□□□ 1.36
TTC28-204ENST00000468807 ALCAMQ13740 583 aa23.53■■□□□ 1.36
TTC28-204ENST00000468807 CENPPQ6IPU0 288 aa23.53■■□□□ 1.36
TTC28-204ENST00000468807 TPRG1Q6ZUI0 275 aa23.53■■□□□ 1.36
TTC28-204ENST00000468807 ASCL5Q7RTU5 278 aa23.53■■□□□ 1.36
TTC28-204ENST00000468807 THEM5Q8N1Q8 247 aa23.53■■□□□ 1.36
TTC28-204ENST00000468807 TTC9BQ8N6N2 239 aa23.53■■□□□ 1.36
TTC28-204ENST00000468807 ZSWIM2Q8NEG5 633 aa23.53■■□□□ 1.36
TTC28-204ENST00000468807 OR10T2Q8NGX3 314 aa23.53■■□□□ 1.36
TTC28-204ENST00000468807 SNX21Q969T3 373 aa23.53■■□□□ 1.36
TTC28-204ENST00000468807 DHX58Q96C10 678 aa23.53■■□□□ 1.36
TTC28-204ENST00000468807 ASB16Q96NS5 453 aa23.53■■□□□ 1.36
TTC28-204ENST00000468807 SEPT5Q99719 369 aaPredicted RBP23.53■■□□□ 1.36
TTC28-204ENST00000468807 PCIF1Q9H4Z3 704 aa23.53■■□□□ 1.36
TTC28-204ENST00000468807 FRMD3A2A2Y4 597 aa23.52■■□□□ 1.36
TTC28-204ENST00000468807 PPP6R2O75170 966 aa23.52■■□□□ 1.36
TTC28-204ENST00000468807 POU5F1Q01860 360 aaKnown RBP23.52■■□□□ 1.36
TTC28-204ENST00000468807 SV2CQ496J9 727 aa23.52■■□□□ 1.36
TTC28-204ENST00000468807 SHKBP1Q8TBC3 707 aa23.52■■□□□ 1.36
TTC28-204ENST00000468807 ZSCAN18Q8TBC5 510 aaPredicted RBP23.52■■□□□ 1.36
TTC28-204ENST00000468807 FAM200AQ8TCP9 573 aa23.52■■□□□ 1.36
TTC28-204ENST00000468807 SMARCD2Q92925 531 aa23.52■■□□□ 1.36
TTC28-204ENST00000468807 NKD2Q969F2 451 aaPredicted RBP23.52■■□□□ 1.36
TTC28-204ENST00000468807 HPS3Q969F9 1004 aa23.52■■□□□ 1.36
TTC28-204ENST00000468807 CBWD1Q9BRT8 395 aa23.52■■□□□ 1.36
TTC28-204ENST00000468807 DNAJC25Q9H1X3 360 aa23.52■■□□□ 1.36
TTC28-204ENST00000468807 TNMDQ9H2S6 317 aa23.52■■□□□ 1.36
TTC28-204ENST00000468807 TMEM206Q9H813 350 aa23.52■■□□□ 1.36
TTC28-204ENST00000468807 BRD9Q9H8M2 597 aa23.52■■□□□ 1.36
TTC28-204ENST00000468807 A0A1W2PRU2 124 aa23.51■■□□□ 1.35
TTC28-204ENST00000468807 FAM170BA6NMN3 283 aa23.51■■□□□ 1.35
TTC28-204ENST00000468807 MOSPD3O75425 235 aa23.51■■□□□ 1.35
TTC28-204ENST00000468807 LDHAP00338 332 aaKnown RBP23.51■■□□□ 1.35
TTC28-204ENST00000468807 CYP11A1P05108 521 aa23.51■■□□□ 1.35
TTC28-204ENST00000468807 GARTP22102 1010 aa23.51■■□□□ 1.35
TTC28-204ENST00000468807 VIPR2P41587 438 aa23.51■■□□□ 1.35
TTC28-204ENST00000468807 EPHA5P54756 1037 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms