RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 ZNF461Q8TAF7 563 aa15.94■□□□□ 0.14
TMEM39A-205ENST00000468676 CXorf38Q8TB03 319 aa15.94■□□□□ 0.14
TMEM39A-205ENST00000468676 PARD3BQ8TEW8 1205 aa15.94■□□□□ 0.14
TMEM39A-205ENST00000468676 DHTKD1Q96HY7 919 aaPredicted RBP15.94■□□□□ 0.14
TMEM39A-205ENST00000468676 UHRF1Q96T88 793 aaPredicted RBP15.94■□□□□ 0.14
TMEM39A-205ENST00000468676 GDAP2Q9NXN4 497 aa15.94■□□□□ 0.14
TMEM39A-205ENST00000468676 FBXW11Q9UKB1 542 aa15.94■□□□□ 0.14
TMEM39A-205ENST00000468676 VCANP13611 3396 aa15.93■□□□□ 0.14
TMEM39A-205ENST00000468676 C5orf42Q9H799 3197 aa15.93■□□□□ 0.14
TMEM39A-205ENST00000468676 IKBKBO14920 756 aa15.93■□□□□ 0.14
TMEM39A-205ENST00000468676 CETN3O15182 167 aa15.93■□□□□ 0.14
TMEM39A-205ENST00000468676 ADAM12O43184 909 aa15.93■□□□□ 0.14
TMEM39A-205ENST00000468676 HUS1O60921 280 aa15.93■□□□□ 0.14
TMEM39A-205ENST00000468676 HNRNPA1P09651 372 aaKnown RBP eCLIP15.93■□□□□ 0.143e-6■■■■□ 19.4
TMEM39A-205ENST00000468676 SPATA31D3P0C874 917 aa15.93■□□□□ 0.14
TMEM39A-205ENST00000468676 LRRC63Q05C16 580 aa15.93■□□□□ 0.14
TMEM39A-205ENST00000468676 MORC3Q14149 939 aa15.93■□□□□ 0.14
TMEM39A-205ENST00000468676 LMBRD2Q68DH5 695 aaPredicted RBP15.93■□□□□ 0.14
TMEM39A-205ENST00000468676 RSPO2Q6UXX9 243 aaPredicted RBP15.93■□□□□ 0.14
TMEM39A-205ENST00000468676 SPATA31D4Q6ZUB0 917 aa15.93■□□□□ 0.14
TMEM39A-205ENST00000468676 CCDC149Q6ZUS6 474 aa15.93■□□□□ 0.14
TMEM39A-205ENST00000468676 INTS8Q75QN2 995 aaKnown RBP15.93■□□□□ 0.14
TMEM39A-205ENST00000468676 GPR149Q86SP6 731 aa15.93■□□□□ 0.14
TMEM39A-205ENST00000468676 ADHFE1Q8IWW8 467 aa15.93■□□□□ 0.14
TMEM39A-205ENST00000468676 THEM5Q8N1Q8 247 aa15.93■□□□□ 0.14
TMEM39A-205ENST00000468676 C12orf76Q8N812 135 aaPredicted RBP15.93■□□□□ 0.14
TMEM39A-205ENST00000468676 SPATA18Q8TC71 538 aa15.93■□□□□ 0.14
TMEM39A-205ENST00000468676 BORCS6Q96GS4 357 aa15.93■□□□□ 0.14
TMEM39A-205ENST00000468676 MKNK1Q9BUB5 465 aa15.93■□□□□ 0.14
TMEM39A-205ENST00000468676 LMBRD1Q9NUN5 540 aa15.93■□□□□ 0.14
TMEM39A-205ENST00000468676 KIAA1468Q9P260 1216 aa15.93■□□□□ 0.14
TMEM39A-205ENST00000468676 SIX4Q9UIU6 781 aa15.93■□□□□ 0.14
TMEM39A-205ENST00000468676 CUL9Q8IWT3 2517 aa15.93■□□□□ 0.14
TMEM39A-205ENST00000468676 PTPRJQ12913 1337 aa15.93■□□□□ 0.14
TMEM39A-205ENST00000468676 CCDC195A0A1B0GUA6 201 aa15.92■□□□□ 0.14
TMEM39A-205ENST00000468676 ZMYND10O75800 440 aa15.92■□□□□ 0.14
TMEM39A-205ENST00000468676 ABLIM3O94929 683 aa15.92■□□□□ 0.14
TMEM39A-205ENST00000468676 KRT13P13646 458 aa15.92■□□□□ 0.14
TMEM39A-205ENST00000468676 ATF2P15336 505 aa15.92■□□□□ 0.14
TMEM39A-205ENST00000468676 HOXA9P31269 272 aa15.92■□□□□ 0.14
TMEM39A-205ENST00000468676 ELF1P32519 619 aa15.92■□□□□ 0.14
TMEM39A-205ENST00000468676 CASP4P49662 377 aa15.92■□□□□ 0.14
TMEM39A-205ENST00000468676 FKBP3Q00688 224 aaKnown RBP15.92■□□□□ 0.14
TMEM39A-205ENST00000468676 ROR1Q01973 937 aa15.92■□□□□ 0.14
TMEM39A-205ENST00000468676 BFSP1Q12934 665 aa15.92■□□□□ 0.14
TMEM39A-205ENST00000468676 TRPC3Q13507 836 aa15.92■□□□□ 0.14
TMEM39A-205ENST00000468676 FOXR2Q6PJQ5 311 aa15.92■□□□□ 0.14
TMEM39A-205ENST00000468676 TMC5Q6UXY8 1006 aa15.92■□□□□ 0.14
TMEM39A-205ENST00000468676 FAM186BQ8IYM0 893 aa15.92■□□□□ 0.14
TMEM39A-205ENST00000468676 TMEM86AQ8N2M4 240 aa15.92■□□□□ 0.14
TMEM39A-205ENST00000468676 HPDLQ96IR7 371 aa15.92■□□□□ 0.14
TMEM39A-205ENST00000468676 APOL5Q9BWW9 433 aa15.92■□□□□ 0.14
TMEM39A-205ENST00000468676 PHF7Q9BWX1 381 aaPredicted RBP15.92■□□□□ 0.14
TMEM39A-205ENST00000468676 TIMM13Q9Y5L4 95 aaPredicted RBP15.92■□□□□ 0.14
TMEM39A-205ENST00000468676 BICDL2A1A5D9 508 aa15.91■□□□□ 0.14
TMEM39A-205ENST00000468676 LRRIQ3A6PVS8 624 aaPredicted RBP15.91■□□□□ 0.14
TMEM39A-205ENST00000468676 PHACTR2O75167 634 aa15.91■□□□□ 0.14
TMEM39A-205ENST00000468676 AKAP3O75969 853 aa15.91■□□□□ 0.14
TMEM39A-205ENST00000468676 POU2F2P09086 479 aa15.91■□□□□ 0.14
TMEM39A-205ENST00000468676 EPB41P11171 864 aaKnown RBP15.91■□□□□ 0.14
TMEM39A-205ENST00000468676 CPB1P15086 417 aa15.91■□□□□ 0.14
TMEM39A-205ENST00000468676 CCNE1P24864 410 aa15.91■□□□□ 0.14
TMEM39A-205ENST00000468676 ATICP31939 592 aa15.91■□□□□ 0.14
TMEM39A-205ENST00000468676 VAMP7P51809 220 aa15.91■□□□□ 0.14
TMEM39A-205ENST00000468676 ARPP19P56211 112 aa15.91■□□□□ 0.14
TMEM39A-205ENST00000468676 CAMK4Q16566 473 aa15.91■□□□□ 0.14
TMEM39A-205ENST00000468676 PPM1LQ5SGD2 360 aa15.91■□□□□ 0.14
TMEM39A-205ENST00000468676 ISM2Q6H9L7 571 aa15.91■□□□□ 0.14
TMEM39A-205ENST00000468676 DPH6Q7L8W6 267 aa15.91■□□□□ 0.14
TMEM39A-205ENST00000468676 TOP6BLQ8N6T0 577 aa15.91■□□□□ 0.14
TMEM39A-205ENST00000468676 ZNF516Q92618 1163 aa15.91■□□□□ 0.14
TMEM39A-205ENST00000468676 COL25A1Q9BXS0 654 aaPredicted RBP15.91■□□□□ 0.14
TMEM39A-205ENST00000468676 PRKD2Q9BZL6 878 aa15.91■□□□□ 0.14
TMEM39A-205ENST00000468676 GZF1Q9H116 711 aaPredicted RBP15.91■□□□□ 0.14
TMEM39A-205ENST00000468676 CLSTN2Q9H4D0 955 aa15.91■□□□□ 0.14
TMEM39A-205ENST00000468676 AFF4Q9UHB7 1163 aaKnown RBP15.91■□□□□ 0.14
TMEM39A-205ENST00000468676 WDR27A2RRH5 827 aa15.9■□□□□ 0.14
TMEM39A-205ENST00000468676 BIN1O00499 593 aa15.9■□□□□ 0.14
TMEM39A-205ENST00000468676 PRRG1O14668 218 aa15.9■□□□□ 0.14
TMEM39A-205ENST00000468676 SLC16A3O15427 465 aaKnown RBP15.9■□□□□ 0.14
TMEM39A-205ENST00000468676 STX10O60499 249 aa15.9■□□□□ 0.14
TMEM39A-205ENST00000468676 XYLBO75191 536 aa15.9■□□□□ 0.14
TMEM39A-205ENST00000468676 STAU1O95793 577 aaKnown RBP15.9■□□□□ 0.14
TMEM39A-205ENST00000468676 C8AP07357 584 aa15.9■□□□□ 0.14
TMEM39A-205ENST00000468676 FAM163BP0C2L3 166 aa15.9■□□□□ 0.14
TMEM39A-205ENST00000468676 MCCD1P59942 119 aaPredicted RBP15.9■□□□□ 0.14
TMEM39A-205ENST00000468676 ZP2Q05996 745 aa15.9■□□□□ 0.14
TMEM39A-205ENST00000468676 SMARCB1Q12824 385 aa15.9■□□□□ 0.14
TMEM39A-205ENST00000468676 GPR17Q13304 367 aa15.9■□□□□ 0.14
TMEM39A-205ENST00000468676 WSCD1Q658N2 575 aa15.9■□□□□ 0.14
TMEM39A-205ENST00000468676 ANKRD40Q6AI12 368 aa15.9■□□□□ 0.14
TMEM39A-205ENST00000468676 TCEAL8Q8IYN2 117 aa15.9■□□□□ 0.14
TMEM39A-205ENST00000468676 PLEKHO2Q8TD55 490 aa15.9■□□□□ 0.14
TMEM39A-205ENST00000468676 SMG7Q92540 1137 aaKnown RBP15.9■□□□□ 0.14
TMEM39A-205ENST00000468676 SYAP1Q96A49 352 aaPredicted RBP15.9■□□□□ 0.14
TMEM39A-205ENST00000468676 PIDD1Q9HB75 910 aa15.9■□□□□ 0.14
TMEM39A-205ENST00000468676 NR2E1Q9Y466 385 aa15.9■□□□□ 0.14
TMEM39A-205ENST00000468676 SNX9Q9Y5X1 595 aa15.9■□□□□ 0.14
TMEM39A-205ENST00000468676 BDP1A6H8Y1 2624 aa15.9■□□□□ 0.14
TMEM39A-205ENST00000468676 C19orf67A6NJJ6 358 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms