RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.81□□□□□ -1.8
TRIM59-202ENST00000468542 RTL10Q7L3V2 364 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 DPH6Q7L8W6 267 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 TMCO2Q7Z6W1 182 aaPredicted RBP3.81□□□□□ -1.8
TRIM59-202ENST00000468542 ZBTB33Q86T24 672 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 CDR2LQ86X02 465 aaPredicted RBP3.81□□□□□ -1.8
TRIM59-202ENST00000468542 ZNF280BQ86YH2 543 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 DEFB123Q8N688 67 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 CEP120Q8N960 986 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 KLHL23Q8NBE8 558 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 RNF169Q8NCN4 708 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 BEST2Q8NFU1 509 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 GPT2Q8TD30 523 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 PARD3BQ8TEW8 1205 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 CACTINQ8WUQ7 758 aaKnown RBP3.81□□□□□ -1.8
TRIM59-202ENST00000468542 TAF4BQ92750 862 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 LPPQ93052 612 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 HPS3Q969F9 1004 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 TMEM169Q96HH4 297 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 ZBTB45Q96K62 511 aaPredicted RBP3.81□□□□□ -1.8
TRIM59-202ENST00000468542 MFSD14AQ96MC6 490 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 ZMAT2Q96NC0 199 aaKnown RBP3.81□□□□□ -1.8
TRIM59-202ENST00000468542 GAS2L1Q99501 681 aaPredicted RBP3.81□□□□□ -1.8
TRIM59-202ENST00000468542 TSG101Q99816 390 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 FAM213AQ9BRX8 229 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 KRTAP17-1Q9BYP8 105 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 RHOBTB2Q9BYZ6 727 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 NRDE2Q9H7Z3 1164 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 VRTNQ9H8Y1 702 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 METTL14Q9HCE5 456 aaKnown RBP3.81□□□□□ -1.8
TRIM59-202ENST00000468542 TLR9Q9NR96 1032 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.81□□□□□ -1.8
TRIM59-202ENST00000468542 CHST7Q9NS84 486 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 RBAKQ9NYW8 714 aaPredicted RBP3.81□□□□□ -1.8
TRIM59-202ENST00000468542 FNIP2Q9P278 1114 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 LIMD1Q9UGP4 676 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 DPP7Q9UHL4 492 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 RWDD2AQ9UIY3 292 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 MAN1B1Q9UKM7 699 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 ADAM28Q9UKQ2 775 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 MAFFQ9ULX9 164 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 INPP5FQ9Y2H2 1132 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 STXBP5LQ9Y2K9 1186 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 FAN1Q9Y2M0 1017 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 GDAQ9Y2T3 454 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 DOCK8Q8NF50 2099 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 GREB1Q4ZG55 1949 aa3.81□□□□□ -1.8
TRIM59-202ENST00000468542 C2orf16Q68DN1 1984 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 PLXNA3P51805 1871 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 LACTBL1A8MY62 500 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 TISP43B9A030 160 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 M0QZQ0 153 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 PODXLO00592 558 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 PIRO00625 290 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 P4HA2O15460 535 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 SPINT1O43278 529 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 B4GALT3O60512 393 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 N4BP1O75113 896 aaKnown RBP3.8□□□□□ -1.8
TRIM59-202ENST00000468542 AKAP3O75969 853 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 DDHD2O94830 711 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 OAZ2O95190 189 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 KIF4AO95239 1232 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 CYP11A1P05108 521 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 NFICP08651 508 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 CTSAP10619 480 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 EPB41P11171 864 aaKnown RBP3.8□□□□□ -1.8
TRIM59-202ENST00000468542 TYMPP19971 482 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 FGFR3P22607 806 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 ATICP31939 592 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 TNFSF9P41273 254 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 MATR3P43243 847 aaKnown RBP eCLIP3.8□□□□□ -1.8
TRIM59-202ENST00000468542 SLC11A1P49279 550 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 GLUD2P49448 558 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 GATMP50440 423 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 OSTNP61366 133 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 RBP5P82980 135 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 DSG1Q02413 1049 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 SOX4Q06945 474 aaPredicted RBP3.8□□□□□ -1.8
TRIM59-202ENST00000468542 SMARCB1Q12824 385 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 BFSP1Q12934 665 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 ADAM9Q13443 819 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 GPM6BQ13491 265 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 CAMK1Q14012 370 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 SMC1AQ14683 1233 aaKnown RBP3.8□□□□□ -1.8
TRIM59-202ENST00000468542 GRIN2CQ14957 1233 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 CAMK4Q16566 473 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 STX1AQ16623 288 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 USP41Q3LFD5 358 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 ZACNQ401N2 412 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 PAN2Q504Q3 1202 aaKnown RBP3.8□□□□□ -1.8
TRIM59-202ENST00000468542 GLRA4Q5JXX5 417 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 ZBTB41Q5SVQ8 909 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 C6orf118Q5T5N4 469 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 C9orf57Q5W0N0 161 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 JADE1Q6IE81 842 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 SLC8B1Q6J4K2 584 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 FUT10Q6P4F1 479 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 ELMSAN1Q6PJG2 1045 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 CYP26C1Q6V0L0 522 aa3.8□□□□□ -1.8
TRIM59-202ENST00000468542 TMEM184AQ6ZMB5 413 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms