RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 SPATA18Q8TC71 538 aa21.57■■□□□ 1.04
NPHP4-206ENST00000468253 PLEKHO2Q8TD55 490 aa21.57■■□□□ 1.04
NPHP4-206ENST00000468253 SFXN1Q9H9B4 322 aa21.57■■□□□ 1.04
NPHP4-206ENST00000468253 CDY1Q9Y6F8 540 aa21.57■■□□□ 1.04
NPHP4-206ENST00000468253 TTC28Q96AY4 2481 aa21.56■■□□□ 1.04
NPHP4-206ENST00000468253 STAU1O95793 577 aaKnown RBP21.56■■□□□ 1.04
NPHP4-206ENST00000468253 C4BPAP04003 597 aaKnown RBP21.56■■□□□ 1.04
NPHP4-206ENST00000468253 ATICP31939 592 aa21.56■■□□□ 1.04
NPHP4-206ENST00000468253 ATAT1Q5SQI0 421 aa21.56■■□□□ 1.04
NPHP4-206ENST00000468253 LMBRD2Q68DH5 695 aaPredicted RBP21.56■■□□□ 1.04
NPHP4-206ENST00000468253 ISM2Q6H9L7 571 aa21.56■■□□□ 1.04
NPHP4-206ENST00000468253 OVOS1Q6IE37 1185 aa21.56■■□□□ 1.04
NPHP4-206ENST00000468253 C15orf39Q6ZRI6 1047 aa21.56■■□□□ 1.04
NPHP4-206ENST00000468253 METTL23Q86XA0 190 aa21.56■■□□□ 1.04
NPHP4-206ENST00000468253 FAM186BQ8IYM0 893 aa21.56■■□□□ 1.04
NPHP4-206ENST00000468253 HPDLQ96IR7 371 aa21.56■■□□□ 1.04
NPHP4-206ENST00000468253 NECTIN4Q96NY8 510 aa21.56■■□□□ 1.04
NPHP4-206ENST00000468253 MAN1C1Q9NR34 630 aa21.56■■□□□ 1.04
NPHP4-206ENST00000468253 ZDHHC7Q9NXF8 308 aa21.56■■□□□ 1.04
NPHP4-206ENST00000468253 FBXW11Q9UKB1 542 aa21.56■■□□□ 1.04
NPHP4-206ENST00000468253 ATG2AQ2TAZ0 1938 aa21.55■■□□□ 1.04
NPHP4-206ENST00000468253 LRRIQ3A6PVS8 624 aaPredicted RBP21.55■■□□□ 1.04
NPHP4-206ENST00000468253 CST3P01034 146 aaPredicted RBP21.55■■□□□ 1.04
NPHP4-206ENST00000468253 KRT19P08727 400 aa21.55■■□□□ 1.04
NPHP4-206ENST00000468253 KRT13P13646 458 aa21.55■■□□□ 1.04
NPHP4-206ENST00000468253 CD44P16070 742 aaKnown RBP21.55■■□□□ 1.04
NPHP4-206ENST00000468253 VAMP7P51809 220 aa21.55■■□□□ 1.04
NPHP4-206ENST00000468253 CLUL1Q15846 466 aa21.55■■□□□ 1.04
NPHP4-206ENST00000468253 LIMS2Q7Z4I7 341 aa21.55■■□□□ 1.04
NPHP4-206ENST00000468253 GPR149Q86SP6 731 aa21.55■■□□□ 1.04
NPHP4-206ENST00000468253 THEM5Q8N1Q8 247 aa21.55■■□□□ 1.04
NPHP4-206ENST00000468253 TMEM86AQ8N2M4 240 aa21.55■■□□□ 1.04
NPHP4-206ENST00000468253 USP15Q9Y4E8 981 aaPredicted RBP21.55■■□□□ 1.04
NPHP4-206ENST00000468253 TIMM13Q9Y5L4 95 aaPredicted RBP21.55■■□□□ 1.04
NPHP4-206ENST00000468253 BICDL2A1A5D9 508 aa21.54■■□□□ 1.04
NPHP4-206ENST00000468253 BIN1O00499 593 aa21.54■■□□□ 1.04
NPHP4-206ENST00000468253 HUS1O60921 280 aa21.54■■□□□ 1.04
NPHP4-206ENST00000468253 ZMYND10O75800 440 aa21.54■■□□□ 1.04
NPHP4-206ENST00000468253 HNRNPA1P09651 372 aaKnown RBP eCLIP21.54■■□□□ 1.04
NPHP4-206ENST00000468253 SPATA31D3P0C874 917 aa21.54■■□□□ 1.04
NPHP4-206ENST00000468253 ATF2P15336 505 aa21.54■■□□□ 1.04
NPHP4-206ENST00000468253 HOXA9P31269 272 aa21.54■■□□□ 1.04
NPHP4-206ENST00000468253 GTF2H1P32780 548 aa21.54■■□□□ 1.04
NPHP4-206ENST00000468253 MTHFRP42898 656 aa21.54■■□□□ 1.04
NPHP4-206ENST00000468253 SPATA31D4Q6ZUB0 917 aa21.54■■□□□ 1.04
NPHP4-206ENST00000468253 GLYCTKQ8IVS8 523 aa21.54■■□□□ 1.04
NPHP4-206ENST00000468253 TOP6BLQ8N6T0 577 aa21.54■■□□□ 1.04
NPHP4-206ENST00000468253 RIPOR3Q96MK2 946 aa21.54■■□□□ 1.04
NPHP4-206ENST00000468253 CEP63Q96MT8 703 aa21.54■■□□□ 1.04
NPHP4-206ENST00000468253 VRTNQ9H8Y1 702 aa21.54■■□□□ 1.04
NPHP4-206ENST00000468253 AFF4Q9UHB7 1163 aaKnown RBP21.54■■□□□ 1.04
NPHP4-206ENST00000468253 NCOR1O75376 2440 aa21.53■■□□□ 1.04
NPHP4-206ENST00000468253 CCDC195A0A1B0GUA6 201 aa21.53■■□□□ 1.04
NPHP4-206ENST00000468253 SLC16A3O15427 465 aaKnown RBP21.53■■□□□ 1.04
NPHP4-206ENST00000468253 POU2F2P09086 479 aa21.53■■□□□ 1.04
NPHP4-206ENST00000468253 EPB41P11171 864 aaKnown RBP21.53■■□□□ 1.04
NPHP4-206ENST00000468253 PMS1P54277 932 aaKnown RBP21.53■■□□□ 1.04
NPHP4-206ENST00000468253 ROR1Q01973 937 aa21.53■■□□□ 1.04
NPHP4-206ENST00000468253 SMARCB1Q12824 385 aa21.53■■□□□ 1.04
NPHP4-206ENST00000468253 GPR17Q13304 367 aa21.53■■□□□ 1.04
NPHP4-206ENST00000468253 TRPC3Q13507 836 aa21.53■■□□□ 1.04
NPHP4-206ENST00000468253 ZACNQ401N2 412 aa21.53■■□□□ 1.04
NPHP4-206ENST00000468253 C1orf220Q5T0J3 134 aa21.53■■□□□ 1.04
NPHP4-206ENST00000468253 RARS2Q5T160 578 aaKnown RBP21.53■■□□□ 1.04
NPHP4-206ENST00000468253 WSCD1Q658N2 575 aa21.53■■□□□ 1.04
NPHP4-206ENST00000468253 SCARA3Q6AZY7 606 aa21.53■■□□□ 1.04
NPHP4-206ENST00000468253 CCDC149Q6ZUS6 474 aa21.53■■□□□ 1.04
NPHP4-206ENST00000468253 FILIP1Q7Z7B0 1213 aa21.53■■□□□ 1.04
NPHP4-206ENST00000468253 TCEAL8Q8IYN2 117 aa21.53■■□□□ 1.04
NPHP4-206ENST00000468253 C12orf76Q8N812 135 aaPredicted RBP21.53■■□□□ 1.04
NPHP4-206ENST00000468253 MLKLQ8NB16 471 aa21.53■■□□□ 1.04
NPHP4-206ENST00000468253 PRKD2Q9BZL6 878 aa21.53■■□□□ 1.04
NPHP4-206ENST00000468253 NUP62CLQ9H1M0 184 aa21.53■■□□□ 1.04
NPHP4-206ENST00000468253 PDCD11Q14690 1871 aaKnown RBP21.53■■□□□ 1.04
NPHP4-206ENST00000468253 PHACTR2O75167 634 aa21.52■■□□□ 1.04
NPHP4-206ENST00000468253 IL9P15248 144 aa21.52■■□□□ 1.04
NPHP4-206ENST00000468253 DLG4P78352 724 aa21.52■■□□□ 1.04
NPHP4-206ENST00000468253 BFSP1Q12934 665 aa21.52■■□□□ 1.04
NPHP4-206ENST00000468253 CBX2Q14781 532 aaPredicted RBP21.52■■□□□ 1.04
NPHP4-206ENST00000468253 LIN9Q5TKA1 542 aa21.52■■□□□ 1.04
NPHP4-206ENST00000468253 TTI2Q6NXR4 508 aa21.52■■□□□ 1.04
NPHP4-206ENST00000468253 SV2AQ7L0J3 742 aa21.52■■□□□ 1.04
NPHP4-206ENST00000468253 GPT2Q8TD30 523 aa21.52■■□□□ 1.04
NPHP4-206ENST00000468253 ADAMTS19Q8TE59 1207 aa21.52■■□□□ 1.04
NPHP4-206ENST00000468253 NELFBQ8WX92 580 aa21.52■■□□□ 1.04
NPHP4-206ENST00000468253 SYAP1Q96A49 352 aaPredicted RBP21.52■■□□□ 1.04
NPHP4-206ENST00000468253 FAM84AQ96KN4 292 aa21.52■■□□□ 1.04
NPHP4-206ENST00000468253 PHF7Q9BWX1 381 aaPredicted RBP21.52■■□□□ 1.04
NPHP4-206ENST00000468253 SNX9Q9Y5X1 595 aa21.52■■□□□ 1.04
NPHP4-206ENST00000468253 WDR27A2RRH5 827 aa21.51■■□□□ 1.03
NPHP4-206ENST00000468253 SPDYE4A6NLX3 237 aa21.51■■□□□ 1.03
NPHP4-206ENST00000468253 GABRDO14764 452 aa21.51■■□□□ 1.03
NPHP4-206ENST00000468253 STX10O60499 249 aa21.51■■□□□ 1.03
NPHP4-206ENST00000468253 MBD3O95983 291 aa21.51■■□□□ 1.03
NPHP4-206ENST00000468253 ELF1P32519 619 aa21.51■■□□□ 1.03
NPHP4-206ENST00000468253 LHX1P48742 406 aa21.51■■□□□ 1.03
NPHP4-206ENST00000468253 SGSM1Q2NKQ1 1148 aa21.51■■□□□ 1.03
NPHP4-206ENST00000468253 TDRD10Q5VZ19 366 aaKnown RBP21.51■■□□□ 1.03
NPHP4-206ENST00000468253 TMC5Q6UXY8 1006 aa21.51■■□□□ 1.03
NPHP4-206ENST00000468253 ADHFE1Q8IWW8 467 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms