RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 URODP06132 367 aa16.3■□□□□ 0.2
SNIP1-202ENST00000468040 SLC9A1P19634 815 aa16.3■□□□□ 0.2
SNIP1-202ENST00000468040 TBXAS1P24557 533 aaPredicted RBP16.3■□□□□ 0.2
SNIP1-202ENST00000468040 ASPAP45381 313 aa16.3■□□□□ 0.2
SNIP1-202ENST00000468040 GLUD2P49448 558 aa16.3■□□□□ 0.2
SNIP1-202ENST00000468040 PLCB2Q00722 1185 aa16.3■□□□□ 0.2
SNIP1-202ENST00000468040 PDXDC1Q6P996 788 aa16.3■□□□□ 0.2
SNIP1-202ENST00000468040 CEP57Q86XR8 500 aa16.3■□□□□ 0.2
SNIP1-202ENST00000468040 GPR65Q8IYL9 337 aa16.3■□□□□ 0.2
SNIP1-202ENST00000468040 PCMTD1Q96MG8 357 aaPredicted RBP16.3■□□□□ 0.2
SNIP1-202ENST00000468040 LMAN2LQ9H0V9 348 aa16.3■□□□□ 0.2
SNIP1-202ENST00000468040 FAM124BQ9H5Z6 455 aaPredicted RBP16.3■□□□□ 0.2
SNIP1-202ENST00000468040 CYP3A43Q9HB55 503 aa16.3■□□□□ 0.2
SNIP1-202ENST00000468040 ALG13Q9NP73 1137 aaKnown RBP16.3■□□□□ 0.2
SNIP1-202ENST00000468040 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.3■□□□□ 0.21e-6■■■■■ 46.6
SNIP1-202ENST00000468040 CHST7Q9NS84 486 aa16.3■□□□□ 0.2
SNIP1-202ENST00000468040 APEX2Q9UBZ4 518 aa16.3■□□□□ 0.2
SNIP1-202ENST00000468040 POLIQ9UNA4 740 aa16.3■□□□□ 0.2
SNIP1-202ENST00000468040 PLXNA4Q9HCM2 1894 aa16.29■□□□□ 0.2
SNIP1-202ENST00000468040 A0A1W2PQC6 194 aa16.29■□□□□ 0.2
SNIP1-202ENST00000468040 SOX1O00570 391 aaPredicted RBP16.29■□□□□ 0.2
SNIP1-202ENST00000468040 GRM6O15303 877 aa16.29■□□□□ 0.2
SNIP1-202ENST00000468040 TACC1O75410 805 aa16.29■□□□□ 0.2
SNIP1-202ENST00000468040 CTSAP10619 480 aa16.29■□□□□ 0.2
SNIP1-202ENST00000468040 RFX1P22670 979 aa16.29■□□□□ 0.2
SNIP1-202ENST00000468040 TKTP29401 623 aaKnown RBP16.29■□□□□ 0.2
SNIP1-202ENST00000468040 DSG1Q02413 1049 aa16.29■□□□□ 0.2
SNIP1-202ENST00000468040 GCNT1Q02742 428 aa16.29■□□□□ 0.2
SNIP1-202ENST00000468040 YWHAHQ04917 246 aaPredicted RBP16.29■□□□□ 0.2
SNIP1-202ENST00000468040 KCNMA1Q12791 1236 aa16.29■□□□□ 0.2
SNIP1-202ENST00000468040 LRMPQ12912 555 aa16.29■□□□□ 0.2
SNIP1-202ENST00000468040 CUL2Q13617 745 aa16.29■□□□□ 0.2
SNIP1-202ENST00000468040 SYCP1Q15431 976 aa16.29■□□□□ 0.2
SNIP1-202ENST00000468040 SOWAHAQ2M3V2 549 aa16.29■□□□□ 0.2
SNIP1-202ENST00000468040 ZNF697Q5TEC3 545 aa16.29■□□□□ 0.2
SNIP1-202ENST00000468040 PDE12Q6L8Q7 609 aaKnown RBP16.29■□□□□ 0.2
SNIP1-202ENST00000468040 ANKS3Q6ZW76 656 aa16.29■□□□□ 0.2
SNIP1-202ENST00000468040 ENOSF1Q7L5Y1 443 aa16.29■□□□□ 0.2
SNIP1-202ENST00000468040 LIMS2Q7Z4I7 341 aa16.29■□□□□ 0.2
SNIP1-202ENST00000468040 ADGRF2Q8IZF7 708 aa16.29■□□□□ 0.2
SNIP1-202ENST00000468040 PPM1KQ8N3J5 372 aa16.29■□□□□ 0.2
SNIP1-202ENST00000468040 PDCL2Q8N4E4 241 aa16.29■□□□□ 0.2
SNIP1-202ENST00000468040 TTC39CQ8N584 583 aa16.29■□□□□ 0.2
SNIP1-202ENST00000468040 POF1BQ8WVV4 589 aa16.29■□□□□ 0.2
SNIP1-202ENST00000468040 TATDN2Q93075 761 aa16.29■□□□□ 0.2
SNIP1-202ENST00000468040 LSM14BQ9BX40 385 aaKnown RBP16.29■□□□□ 0.2
SNIP1-202ENST00000468040 OXCT2Q9BYC2 517 aaPredicted RBP16.29■□□□□ 0.2
SNIP1-202ENST00000468040 BCO2Q9BYV7 579 aa16.29■□□□□ 0.2
SNIP1-202ENST00000468040 XPO4Q9C0E2 1151 aaKnown RBP16.29■□□□□ 0.2
SNIP1-202ENST00000468040 ZBP1Q9H171 429 aa16.29■□□□□ 0.2
SNIP1-202ENST00000468040 PLCB1Q9NQ66 1216 aa16.29■□□□□ 0.2
SNIP1-202ENST00000468040 TLR9Q9NR96 1032 aa16.29■□□□□ 0.2
SNIP1-202ENST00000468040 MRPL17Q9NRX2 175 aaKnown RBP16.29■□□□□ 0.2
SNIP1-202ENST00000468040 L1RE1Q9UN81 338 aa16.29■□□□□ 0.2
SNIP1-202ENST00000468040 SIK3Q9Y2K2 1263 aa16.29■□□□□ 0.2
SNIP1-202ENST00000468040 DAAM1Q9Y4D1 1078 aa16.29■□□□□ 0.2
SNIP1-202ENST00000468040 H7C4K7 107 aa16.28■□□□□ 0.2
SNIP1-202ENST00000468040 TEX33O43247 280 aa16.28■□□□□ 0.2
SNIP1-202ENST00000468040 OAZ2O95190 189 aa16.28■□□□□ 0.2
SNIP1-202ENST00000468040 LHX1P48742 406 aa16.28■□□□□ 0.2
SNIP1-202ENST00000468040 YWHAEP62258 255 aaKnown RBP16.28■□□□□ 0.2
SNIP1-202ENST00000468040 CREMQ03060 361 aa16.28■□□□□ 0.2
SNIP1-202ENST00000468040 PTPROQ16827 1216 aa16.28■□□□□ 0.2
SNIP1-202ENST00000468040 HABP4Q5JVS0 413 aaKnown RBP16.28■□□□□ 0.2
SNIP1-202ENST00000468040 RTP2Q5QGT7 225 aa16.28■□□□□ 0.2
SNIP1-202ENST00000468040 VARS2Q5ST30 1063 aaKnown RBP16.28■□□□□ 0.2
SNIP1-202ENST00000468040 WSCD1Q658N2 575 aa16.28■□□□□ 0.2
SNIP1-202ENST00000468040 OVOS1Q6IE37 1185 aa16.28■□□□□ 0.2
SNIP1-202ENST00000468040 GPR153Q6NV75 609 aa16.28■□□□□ 0.2
SNIP1-202ENST00000468040 SCARA5Q6ZMJ2 495 aa16.28■□□□□ 0.2
SNIP1-202ENST00000468040 TAS1R1Q7RTX1 841 aa16.28■□□□□ 0.2
SNIP1-202ENST00000468040 TMC7Q7Z402 723 aa16.28■□□□□ 0.2
SNIP1-202ENST00000468040 THEM5Q8N1Q8 247 aa16.28■□□□□ 0.2
SNIP1-202ENST00000468040 RIN2Q8WYP3 895 aaPredicted RBP16.28■□□□□ 0.2
SNIP1-202ENST00000468040 PIK3R5Q8WYR1 880 aa16.28■□□□□ 0.2
SNIP1-202ENST00000468040 JAKMIP2Q96AA8 810 aa16.28■□□□□ 0.2
SNIP1-202ENST00000468040 ELMO3Q96BJ8 720 aa16.28■□□□□ 0.2
SNIP1-202ENST00000468040 B3GALT6Q96L58 329 aa16.28■□□□□ 0.2
SNIP1-202ENST00000468040 TCF25Q9BQ70 676 aa16.28■□□□□ 0.2
SNIP1-202ENST00000468040 SMYD3Q9H7B4 428 aa16.28■□□□□ 0.2
SNIP1-202ENST00000468040 NGRNQ9NPE2 291 aaKnown RBP16.28■□□□□ 0.2
SNIP1-202ENST00000468040 ENTPD7Q9NQZ7 604 aa16.28■□□□□ 0.2
SNIP1-202ENST00000468040 LAMA2P24043 3122 aaKnown RBP16.28■□□□□ 0.2
SNIP1-202ENST00000468040 LAMA3Q16787 3333 aa16.27■□□□□ 0.2
SNIP1-202ENST00000468040 TRIOBPQ9H2D6 2365 aa16.27■□□□□ 0.2
SNIP1-202ENST00000468040 LPXNO60711 386 aa16.27■□□□□ 0.2
SNIP1-202ENST00000468040 WARSP23381 471 aaKnown RBP16.27■□□□□ 0.2
SNIP1-202ENST00000468040 MFAP3P55082 362 aa16.27■□□□□ 0.2
SNIP1-202ENST00000468040 SMC1AQ14683 1233 aaKnown RBP16.27■□□□□ 0.2
SNIP1-202ENST00000468040 KLHDC7AQ5VTJ3 777 aa16.27■□□□□ 0.2
SNIP1-202ENST00000468040 KIAA0319Q5VV43 1072 aa16.27■□□□□ 0.2
SNIP1-202ENST00000468040 SMYD5Q6GMV2 418 aa16.27■□□□□ 0.2
SNIP1-202ENST00000468040 ZNF280DQ6N043 979 aa16.27■□□□□ 0.2
SNIP1-202ENST00000468040 PHLDB3Q6NSJ2 640 aa16.27■□□□□ 0.2
SNIP1-202ENST00000468040 NEK11Q8NG66 645 aa16.27■□□□□ 0.2
SNIP1-202ENST00000468040 GDPD5Q8WTR4 605 aa16.27■□□□□ 0.2
SNIP1-202ENST00000468040 LRCH3Q96II8 777 aa16.27■□□□□ 0.2
SNIP1-202ENST00000468040 TRIM5Q9C035 493 aa16.27■□□□□ 0.2
SNIP1-202ENST00000468040 DNAI2Q9GZS0 605 aa16.27■□□□□ 0.2
SNIP1-202ENST00000468040 SNX25Q9H3E2 840 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms