RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 RBAKQ9NYW8 714 aaPredicted RBP20.63■□□□□ 0.89
COL7A1-207ENST00000467985 SPTLC1O15269 473 aa20.62■□□□□ 0.89
COL7A1-207ENST00000467985 EXTL3O43909 919 aa20.62■□□□□ 0.89
COL7A1-207ENST00000467985 ASIC1P78348 528 aa20.62■□□□□ 0.89
COL7A1-207ENST00000467985 TWF1Q12792 350 aa20.62■□□□□ 0.89
COL7A1-207ENST00000467985 SLC5A9Q2M3M2 681 aa20.62■□□□□ 0.89
COL7A1-207ENST00000467985 SV2CQ496J9 727 aa20.62■□□□□ 0.89
COL7A1-207ENST00000467985 CWF19L1Q69YN2 538 aaKnown RBP20.62■□□□□ 0.89
COL7A1-207ENST00000467985 EFCAB13Q8IY85 973 aa20.62■□□□□ 0.89
COL7A1-207ENST00000467985 GPR152Q8TDT2 470 aa20.62■□□□□ 0.89
COL7A1-207ENST00000467985 ING5Q8WYH8 240 aa20.62■□□□□ 0.89
COL7A1-207ENST00000467985 SAAL1Q96ER3 474 aa20.62■□□□□ 0.89
COL7A1-207ENST00000467985 ZNF560Q96MR9 790 aa20.62■□□□□ 0.89
COL7A1-207ENST00000467985 FGFBP2Q9BYJ0 223 aa20.62■□□□□ 0.89
COL7A1-207ENST00000467985 HSFX1Q9UBD0 423 aa20.62■□□□□ 0.89
COL7A1-207ENST00000467985 VPS13AQ96RL7 3174 aa20.62■□□□□ 0.89
COL7A1-207ENST00000467985 KRBA1A5PL33 1030 aa20.61■□□□□ 0.89
COL7A1-207ENST00000467985 STK25O00506 426 aa20.61■□□□□ 0.89
COL7A1-207ENST00000467985 EIF3DO15371 548 aaKnown RBP eCLIP20.61■□□□□ 0.89
COL7A1-207ENST00000467985 POLR2DO15514 142 aaKnown RBP20.61■□□□□ 0.89
COL7A1-207ENST00000467985 ECI2O75521 394 aa20.61■□□□□ 0.89
COL7A1-207ENST00000467985 PRPF6O94906 941 aaKnown RBP20.61■□□□□ 0.89
COL7A1-207ENST00000467985 PFKPQ01813 784 aa20.61■□□□□ 0.89
COL7A1-207ENST00000467985 PRSS36Q5K4E3 855 aa20.61■□□□□ 0.89
COL7A1-207ENST00000467985 SHDQ96IW2 340 aa20.61■□□□□ 0.89
COL7A1-207ENST00000467985 C7orf25Q9BPX7 421 aa20.61■□□□□ 0.89
COL7A1-207ENST00000467985 ASAH2Q9NR71 780 aa20.61■□□□□ 0.89
COL7A1-207ENST00000467985 ARHGEF3Q9NR81 526 aa20.61■□□□□ 0.89
COL7A1-207ENST00000467985 CA14Q9ULX7 337 aa20.61■□□□□ 0.89
COL7A1-207ENST00000467985 PCDHA7Q9UN72 937 aa20.61■□□□□ 0.89
COL7A1-207ENST00000467985 YIPF1Q9Y548 306 aa20.61■□□□□ 0.89
COL7A1-207ENST00000467985 MYO15AQ9UKN7 3530 aa20.61■□□□□ 0.89
COL7A1-207ENST00000467985 ZFHX2Q9C0A1 2572 aaPredicted RBP20.61■□□□□ 0.89
COL7A1-207ENST00000467985 SCN1AP35498 2009 aa20.6■□□□□ 0.89
COL7A1-207ENST00000467985 CYB561D2O14569 222 aa20.6■□□□□ 0.89
COL7A1-207ENST00000467985 OR4Q2P0C623 313 aa20.6■□□□□ 0.89
COL7A1-207ENST00000467985 CEBPBP17676 345 aa20.6■□□□□ 0.89
COL7A1-207ENST00000467985 ALDH1A3P47895 512 aa20.6■□□□□ 0.89
COL7A1-207ENST00000467985 EPHB3P54753 998 aa20.6■□□□□ 0.89
COL7A1-207ENST00000467985 EPHA5P54756 1037 aa20.6■□□□□ 0.89
COL7A1-207ENST00000467985 GPC5P78333 572 aa20.6■□□□□ 0.89
COL7A1-207ENST00000467985 TFAMQ00059 246 aaKnown RBP20.6■□□□□ 0.89
COL7A1-207ENST00000467985 RESP18Q5W5W9 173 aa20.6■□□□□ 0.89
COL7A1-207ENST00000467985 CENPPQ6IPU0 288 aa20.6■□□□□ 0.89
COL7A1-207ENST00000467985 PHLDB3Q6NSJ2 640 aa20.6■□□□□ 0.89
COL7A1-207ENST00000467985 THEM5Q8N1Q8 247 aa20.6■□□□□ 0.89
COL7A1-207ENST00000467985 SPRYD3Q8NCJ5 442 aa20.6■□□□□ 0.89
COL7A1-207ENST00000467985 MCRS1Q96EZ8 462 aa20.6■□□□□ 0.89
COL7A1-207ENST00000467985 PGLYRP2Q96PD5 576 aa20.6■□□□□ 0.89
COL7A1-207ENST00000467985 CBWD1Q9BRT8 395 aa20.6■□□□□ 0.89
COL7A1-207ENST00000467985 RPP25Q9BUL9 199 aaKnown RBP20.6■□□□□ 0.89
COL7A1-207ENST00000467985 CEP72Q9P209 647 aa20.6■□□□□ 0.89
COL7A1-207ENST00000467985 ASB3Q9Y575 518 aa20.6■□□□□ 0.89
COL7A1-207ENST00000467985 TSC2P49815 1807 aa20.6■□□□□ 0.89
COL7A1-207ENST00000467985 KPNA7A9QM74 516 aa20.59■□□□□ 0.89
COL7A1-207ENST00000467985 MRE11P49959 708 aa20.59■□□□□ 0.89
COL7A1-207ENST00000467985 SMARCB1Q12824 385 aa20.59■□□□□ 0.89
COL7A1-207ENST00000467985 DUSP4Q13115 394 aa20.59■□□□□ 0.89
COL7A1-207ENST00000467985 PKP1Q13835 747 aa20.59■□□□□ 0.89
COL7A1-207ENST00000467985 FAM26FQ5R3K3 315 aa20.59■□□□□ 0.89
COL7A1-207ENST00000467985 ALYREFQ86V81 257 aaKnown RBP20.59■□□□□ 0.89
COL7A1-207ENST00000467985 GPD1LQ8N335 351 aa20.59■□□□□ 0.89
COL7A1-207ENST00000467985 ST13P5Q8NFI4 369 aaPredicted RBP20.59■□□□□ 0.89
COL7A1-207ENST00000467985 KXD1Q9BQD3 176 aa20.59■□□□□ 0.89
COL7A1-207ENST00000467985 PCIF1Q9H4Z3 704 aa20.59■□□□□ 0.89
COL7A1-207ENST00000467985 TBC1D17Q9HA65 648 aa20.59■□□□□ 0.89
COL7A1-207ENST00000467985 KIAA1586Q9HCI6 787 aa20.59■□□□□ 0.89
COL7A1-207ENST00000467985 RCOR1Q9UKL0 485 aa20.59■□□□□ 0.89
COL7A1-207ENST00000467985 ITGA11Q9UKX5 1188 aa20.59■□□□□ 0.89
COL7A1-207ENST00000467985 UBE4BO95155 1302 aa20.58■□□□□ 0.89
COL7A1-207ENST00000467985 MTMR11A4FU01 709 aa20.58■□□□□ 0.89
COL7A1-207ENST00000467985 TULP1O00294 542 aaPredicted RBP20.58■□□□□ 0.89
COL7A1-207ENST00000467985 VNN2O95498 520 aa20.58■□□□□ 0.89
COL7A1-207ENST00000467985 DNM1Q05193 864 aaKnown RBP20.58■□□□□ 0.89
COL7A1-207ENST00000467985 SURF1Q15526 300 aa20.58■□□□□ 0.89
COL7A1-207ENST00000467985 UNC13DQ70J99 1090 aa20.58■□□□□ 0.89
COL7A1-207ENST00000467985 EPM2AIP1Q7L775 607 aaPredicted RBP20.58■□□□□ 0.89
COL7A1-207ENST00000467985 CCDC105Q8IYK2 499 aa20.58■□□□□ 0.89
COL7A1-207ENST00000467985 LRRC52Q8N7C0 313 aa20.58■□□□□ 0.89
COL7A1-207ENST00000467985 ZSWIM2Q8NEG5 633 aa20.58■□□□□ 0.89
COL7A1-207ENST00000467985 ZNF507Q8TCN5 953 aa20.58■□□□□ 0.89
COL7A1-207ENST00000467985 NOC3LQ8WTT2 800 aaKnown RBP20.58■□□□□ 0.89
COL7A1-207ENST00000467985 C2orf15Q8WU43 125 aaKnown RBP20.58■□□□□ 0.89
COL7A1-207ENST00000467985 ATOH1Q92858 354 aaPredicted RBP20.58■□□□□ 0.89
COL7A1-207ENST00000467985 ELSPBP1Q96BH3 223 aa20.58■□□□□ 0.89
COL7A1-207ENST00000467985 TCEAL4Q96EI5 215 aa20.58■□□□□ 0.89
COL7A1-207ENST00000467985 GPR88Q9GZN0 384 aa20.58■□□□□ 0.89
COL7A1-207ENST00000467985 DMDP11532 3685 aa20.57■□□□□ 0.88
COL7A1-207ENST00000467985 TCHHQ07283 1943 aa20.57■□□□□ 0.88
COL7A1-207ENST00000467985 GOLGA8IPA6NC78 632 aa20.57■□□□□ 0.88
COL7A1-207ENST00000467985 ZNF233A6NK53 670 aa20.57■□□□□ 0.88
COL7A1-207ENST00000467985 GOLGA8JA6NMD2 632 aa20.57■□□□□ 0.88
COL7A1-207ENST00000467985 PI15O43692 258 aa20.57■□□□□ 0.88
COL7A1-207ENST00000467985 FGF19O95750 216 aa20.57■□□□□ 0.88
COL7A1-207ENST00000467985 MYL4P12829 197 aa20.57■□□□□ 0.88
COL7A1-207ENST00000467985 POLR2BP30876 1174 aaKnown RBP20.57■□□□□ 0.88
COL7A1-207ENST00000467985 TUFMP49411 452 aaKnown RBP20.57■□□□□ 0.88
COL7A1-207ENST00000467985 SNRPFP62306 86 aaKnown RBP20.57■□□□□ 0.88
COL7A1-207ENST00000467985 ITIH5Q86UX2 942 aa20.57■□□□□ 0.88
COL7A1-207ENST00000467985 CEP57L1Q8IYX8 460 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms