RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	PACSIN2	Q9UNF0	486 aa	Predicted RBP	13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	COG5	Q9UP83	839 aa		13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435	TANC1	Q9C0D5	1861 aa		13.12	□□□□□ -0.31
HDLBP-231	ENST00000467435		A0A0U1RQG5	324 aa	Predicted RBP	13.11	□□□□□ -0.31
HDLBP-231	ENST00000467435	SMIM28	A0A1B0GU29	152 aa		13.11	□□□□□ -0.31
HDLBP-231	ENST00000467435	KBTBD13	C9JR72	458 aa		13.11	□□□□□ -0.31
HDLBP-231	ENST00000467435	CAND2	O75155	1236 aa		13.11	□□□□□ -0.31
HDLBP-231	ENST00000467435	MTA2	O94776	668 aa		13.11	□□□□□ -0.31
HDLBP-231	ENST00000467435	KIF4A	O95239	1232 aa		13.11	□□□□□ -0.31
HDLBP-231	ENST00000467435	CD4	P01730	458 aa		13.11	□□□□□ -0.31
HDLBP-231	ENST00000467435	CYP1A2	P05177	515 aa		13.11	□□□□□ -0.31
HDLBP-231	ENST00000467435	CFH	P08603	1231 aa		13.11	□□□□□ -0.31
HDLBP-231	ENST00000467435	MYBL1	P10243	752 aa		13.11	□□□□□ -0.31
HDLBP-231	ENST00000467435	GHR	P10912	638 aa		13.11	□□□□□ -0.31
HDLBP-231	ENST00000467435	SSTR3	P32745	418 aa	Predicted RBP	13.11	□□□□□ -0.31
HDLBP-231	ENST00000467435	DNA2	P51530	1060 aa		13.11	□□□□□ -0.31
HDLBP-231	ENST00000467435	CDH8	P55286	799 aa		13.11	□□□□□ -0.31
HDLBP-231	ENST00000467435	RPS6KA1	Q15418	735 aa		13.11	□□□□□ -0.31
HDLBP-231	ENST00000467435	ERCC6L	Q2NKX8	1250 aa		13.11	□□□□□ -0.31
HDLBP-231	ENST00000467435	C9orf57	Q5W0N0	161 aa		13.11	□□□□□ -0.31
HDLBP-231	ENST00000467435	PEX26	Q7Z412	305 aa		13.11	□□□□□ -0.31
HDLBP-231	ENST00000467435	LRRC52	Q8N7C0	313 aa		13.11	□□□□□ -0.31
HDLBP-231	ENST00000467435	ARRDC4	Q8NCT1	418 aa		13.11	□□□□□ -0.31
HDLBP-231	ENST00000467435	ZNF564	Q8TBZ8	553 aa	Predicted RBP	13.11	□□□□□ -0.31
HDLBP-231	ENST00000467435	SH3TC2	Q8TF17	1288 aa		13.11	□□□□□ -0.31
HDLBP-231	ENST00000467435	COG1	Q8WTW3	980 aa		13.11	□□□□□ -0.31
HDLBP-231	ENST00000467435	CPA5	Q8WXQ8	436 aa		13.11	□□□□□ -0.31
HDLBP-231	ENST00000467435	CYFIP2	Q96F07	1278 aa		13.11	□□□□□ -0.31
HDLBP-231	ENST00000467435	ZNF560	Q96MR9	790 aa		13.11	□□□□□ -0.31
HDLBP-231	ENST00000467435	PSMB7	Q99436	277 aa		13.11	□□□□□ -0.31
HDLBP-231	ENST00000467435	BEGAIN	Q9BUH8	593 aa		13.11	□□□□□ -0.31
HDLBP-231	ENST00000467435	NUP85	Q9BW27	656 aa		13.11	□□□□□ -0.31
HDLBP-231	ENST00000467435	AGO3	Q9H9G7	860 aa	Known RBP	13.11	□□□□□ -0.31
HDLBP-231	ENST00000467435	CNOT8	Q9UFF9	292 aa	Known RBP	13.11	□□□□□ -0.31
HDLBP-231	ENST00000467435	PPEF2	O14830	753 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	MED7	O43513	233 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	CILP	O75339	1184 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	LSM8	O95777	96 aa	Known RBP	13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	PAEP	P09466	180 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	ITGA4	P13612	1032 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	CD19	P15391	556 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	ZSCAN20	P17040	1043 aa	Predicted RBP	13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	ATF7	P17544	494 aa	Predicted RBP	13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	CD52	P31358	61 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	CXCR5	P32302	372 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	RAD23B	P54727	409 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	INCA1	Q0VD86	236 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	LPIN1	Q14693	890 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	PTPRO	Q16827	1216 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	FAM26D	Q5JW98	314 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	C11orf63	Q6NUN7	778 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	MON1B	Q7L1V2	547 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	RSRC2	Q7L4I2	434 aa	Known RBP	13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	NT5DC3	Q86UY8	548 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	PHF13	Q86YI8	300 aa	Predicted RBP	13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	MCOLN2	Q8IZK6	566 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	TTC39C	Q8N584	583 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	WHAMM	Q8TF30	809 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	TFAP2B	Q92481	460 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	TWNK	Q96RR1	684 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	MMS19	Q96T76	1030 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	ZSWIM1	Q9BR11	485 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	C11orf70	Q9BRQ4	267 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	ELOVL4	Q9GZR5	314 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	UNC93B1	Q9H1C4	597 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	FAM124B	Q9H5Z6	455 aa	Predicted RBP	13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	AVEN	Q9NQS1	362 aa	Predicted RBP	13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	RNF19A	Q9NV58	838 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	UVRAG	Q9P2Y5	699 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	HMGXB4	Q9UGU5	601 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	AMFR	Q9UKV5	643 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	PCDHGC3	Q9UN70	934 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	PHF24	Q9UPV7	400 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	STXBP5L	Q9Y2K9	1186 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	TSC2	P49815	1807 aa		13.1	□□□□□ -0.31
HDLBP-231	ENST00000467435	TMEM110-MUSTN1	A8MSY1	372 aa		13.09	□□□□□ -0.31
HDLBP-231	ENST00000467435	CYP3A5	P20815	502 aa		13.09	□□□□□ -0.31
HDLBP-231	ENST00000467435	RAB27A	P51159	221 aa		13.09	□□□□□ -0.31
HDLBP-231	ENST00000467435	SOX4	Q06945	474 aa	Predicted RBP	13.09	□□□□□ -0.31
HDLBP-231	ENST00000467435	ORC1	Q13415	861 aa		13.09	□□□□□ -0.31
HDLBP-231	ENST00000467435	ZNF618	Q5T7W0	954 aa		13.09	□□□□□ -0.31
HDLBP-231	ENST00000467435	CCDC181	Q5TID7	509 aa		13.09	□□□□□ -0.31
HDLBP-231	ENST00000467435	CREG2	Q8IUH2	290 aa		13.09	□□□□□ -0.31
HDLBP-231	ENST00000467435	SLC43A3	Q8NBI5	491 aa		13.09	□□□□□ -0.31
HDLBP-231	ENST00000467435	SLC4A11	Q8NBS3	891 aa		13.09	□□□□□ -0.31
HDLBP-231	ENST00000467435	C1orf131	Q8NDD1	294 aa	Known RBP	13.09	□□□□□ -0.31
HDLBP-231	ENST00000467435	ANKRD7	Q92527	254 aa		13.09	□□□□□ -0.31
HDLBP-231	ENST00000467435	TMEM176A	Q96HP8	235 aa		13.09	□□□□□ -0.31
HDLBP-231	ENST00000467435	RPS6KC1	Q96S38	1066 aa		13.09	□□□□□ -0.31
HDLBP-231	ENST00000467435	OSBPL7	Q9BZF2	842 aa		13.09	□□□□□ -0.31
HDLBP-231	ENST00000467435	TRPV6	Q9H1D0	765 aa		13.09	□□□□□ -0.31
HDLBP-231	ENST00000467435	ABCB6	Q9NP58	842 aa		13.09	□□□□□ -0.31
HDLBP-231	ENST00000467435	CHORDC1	Q9UHD1	332 aa	Predicted RBP	13.09	□□□□□ -0.31
HDLBP-231	ENST00000467435	PADI3	Q9ULW8	664 aa		13.09	□□□□□ -0.31
HDLBP-231	ENST00000467435	BARX2	Q9UMQ3	279 aa	Predicted RBP	13.09	□□□□□ -0.31
HDLBP-231	ENST00000467435	PTPN22	Q9Y2R2	807 aa		13.09	□□□□□ -0.31
HDLBP-231	ENST00000467435	CEP83	Q9Y592	693 aa		13.09	□□□□□ -0.31
HDLBP-231	ENST00000467435	SNX9	Q9Y5X1	595 aa		13.09	□□□□□ -0.31
HDLBP-231	ENST00000467435	MEIS3P2	A8K0S8	358 aa		13.08	□□□□□ -0.32
HDLBP-231	ENST00000467435	ARVCF	O00192	962 aa		13.08	□□□□□ -0.32

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