RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 OTOP3Q7RTS5 596 aa10.98□□□□□ -0.65
CD40-204ENST00000466205 METTL23Q86XA0 190 aa10.98□□□□□ -0.65
CD40-204ENST00000466205 ITFG1Q8TB96 612 aa10.98□□□□□ -0.65
CD40-204ENST00000466205 RSAD2Q8WXG1 361 aa10.98□□□□□ -0.65
CD40-204ENST00000466205 CCDC47Q96A33 483 aaKnown RBP10.98□□□□□ -0.65
CD40-204ENST00000466205 ELMO3Q96BJ8 720 aa10.98□□□□□ -0.65
CD40-204ENST00000466205 BORCS6Q96GS4 357 aa10.98□□□□□ -0.65
CD40-204ENST00000466205 ZNF560Q96MR9 790 aa10.98□□□□□ -0.65
CD40-204ENST00000466205 FNBP1Q96RU3 617 aa10.98□□□□□ -0.65
CD40-204ENST00000466205 LRFN3Q9BTN0 628 aa10.98□□□□□ -0.65
CD40-204ENST00000466205 C1QTNF1Q9BXJ1 281 aa10.98□□□□□ -0.65
CD40-204ENST00000466205 CRISPLD1Q9H336 500 aa10.98□□□□□ -0.65
CD40-204ENST00000466205 INTS13Q9NVM9 706 aa10.98□□□□□ -0.65
CD40-204ENST00000466205 DNMT3BQ9UBC3 853 aaKnown RBP10.98□□□□□ -0.65
CD40-204ENST00000466205 SIX4Q9UIU6 781 aa10.98□□□□□ -0.65
CD40-204ENST00000466205 SLC27A5Q9Y2P5 690 aa10.98□□□□□ -0.65
CD40-204ENST00000466205 SNX9Q9Y5X1 595 aa10.98□□□□□ -0.65
CD40-204ENST00000466205 KIAA0391O15091 583 aaKnown RBP10.97□□□□□ -0.65
CD40-204ENST00000466205 XYLBO75191 536 aa10.97□□□□□ -0.65
CD40-204ENST00000466205 RHOBTB3O94955 611 aa10.97□□□□□ -0.65
CD40-204ENST00000466205 OAZ2O95190 189 aa10.97□□□□□ -0.65
CD40-204ENST00000466205 HNRNPA1P09651 372 aaKnown RBP eCLIP10.97□□□□□ -0.65
CD40-204ENST00000466205 TYMPP19971 482 aa10.97□□□□□ -0.65
CD40-204ENST00000466205 ANP32AP39687 249 aaKnown RBP10.97□□□□□ -0.65
CD40-204ENST00000466205 ZXDAP98168 799 aa10.97□□□□□ -0.65
CD40-204ENST00000466205 POU5F1Q01860 360 aaKnown RBP10.97□□□□□ -0.65
CD40-204ENST00000466205 DUSP4Q13115 394 aa10.97□□□□□ -0.65
CD40-204ENST00000466205 PSMD2Q13200 908 aa10.97□□□□□ -0.65
CD40-204ENST00000466205 SNW1Q13573 536 aaKnown RBP10.97□□□□□ -0.65
CD40-204ENST00000466205 SLC39A12Q504Y0 691 aa10.97□□□□□ -0.65
CD40-204ENST00000466205 CEP135Q66GS9 1140 aa10.97□□□□□ -0.65
CD40-204ENST00000466205 NT5DC4Q86YG4 428 aa10.97□□□□□ -0.65
CD40-204ENST00000466205 WDR49Q8IV35 697 aa10.97□□□□□ -0.65
CD40-204ENST00000466205 ZDHHC14Q8IZN3 488 aa10.97□□□□□ -0.65
CD40-204ENST00000466205 HS6ST3Q8IZP7 471 aa10.97□□□□□ -0.65
CD40-204ENST00000466205 TTC9BQ8N6N2 239 aa10.97□□□□□ -0.65
CD40-204ENST00000466205 ATAD1Q8NBU5 361 aa10.97□□□□□ -0.65
CD40-204ENST00000466205 CXorf38Q8TB03 319 aa10.97□□□□□ -0.65
CD40-204ENST00000466205 CGRRF1Q99675 332 aa10.97□□□□□ -0.65
CD40-204ENST00000466205 RTP3Q9BQQ7 232 aa10.97□□□□□ -0.65
CD40-204ENST00000466205 CORO1BQ9BR76 489 aa10.97□□□□□ -0.65
CD40-204ENST00000466205 KCTD10Q9H3F6 313 aa10.97□□□□□ -0.65
CD40-204ENST00000466205 KIAA1586Q9HCI6 787 aa10.97□□□□□ -0.65
CD40-204ENST00000466205 AFF4Q9UHB7 1163 aaKnown RBP10.97□□□□□ -0.65
CD40-204ENST00000466205 ITGA11Q9UKX5 1188 aa10.97□□□□□ -0.65
CD40-204ENST00000466205 R3HCC1Q9Y3T6 440 aaKnown RBP10.97□□□□□ -0.65
CD40-204ENST00000466205 YIPF1Q9Y548 306 aa10.97□□□□□ -0.65
CD40-204ENST00000466205 INSL5Q9Y5Q6 135 aa10.97□□□□□ -0.65
CD40-204ENST00000466205 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.97□□□□□ -0.65
CD40-204ENST00000466205 SCN1AP35498 2009 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 MTCL1Q9Y4B5 1905 aaKnown RBP10.96□□□□□ -0.65
CD40-204ENST00000466205 MTMR11A4FU01 709 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 NARSO43776 548 aaKnown RBP10.96□□□□□ -0.65
CD40-204ENST00000466205 CALUO43852 315 aaPredicted RBP10.96□□□□□ -0.65
CD40-204ENST00000466205 VNN2O95498 520 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 CST3P01034 146 aaPredicted RBP10.96□□□□□ -0.65
CD40-204ENST00000466205 NR3C1P04150 777 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 MYL1P05976 194 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 RHOP08100 348 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 GJA1P17302 382 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 DLG4P78352 724 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 RBP5P82980 135 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 FAM160A1Q05DH4 1040 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 MTMR3Q13615 1198 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 PSMD6Q15008 389 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 SURF1Q15526 300 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 CCDC142Q17RM4 750 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 DUOXA2Q1HG44 320 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 SLC5A9Q2M3M2 681 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 UVSSAQ2YD98 709 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 PABPC1LQ4VXU2 614 aaKnown RBP10.96□□□□□ -0.65
CD40-204ENST00000466205 TPGS2Q68CL5 300 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 TRAPPC11Q7Z392 1133 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 OSTM1Q86WC4 334 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 THEM5Q8N1Q8 247 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 PLCD3Q8N3E9 789 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 PDCL2Q8N4E4 241 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 STKLD1Q8NE28 680 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 ENGASEQ8NFI3 743 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 PLEKHO2Q8TD55 490 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 ZNF516Q92618 1163 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 EDAQ92838 391 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 EEF2KMTQ96G04 330 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 HPDLQ96IR7 371 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 SEPT5Q99719 369 aaPredicted RBP10.96□□□□□ -0.65
CD40-204ENST00000466205 MMRN2Q9H8L6 949 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 KCNK12Q9HB15 430 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.96□□□□□ -0.65
CD40-204ENST00000466205 DDX43Q9NXZ2 648 aaKnown RBP10.96□□□□□ -0.65
CD40-204ENST00000466205 L1RE1Q9UN81 338 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 USTQ9Y2C2 406 aa10.96□□□□□ -0.65
CD40-204ENST00000466205 OR6C75A6NL08 312 aa10.95□□□□□ -0.66
CD40-204ENST00000466205 LRRIQ3A6PVS8 624 aaPredicted RBP10.95□□□□□ -0.66
CD40-204ENST00000466205 NRG2O14511 850 aaPredicted RBP10.95□□□□□ -0.66
CD40-204ENST00000466205 PHACTR2O75167 634 aa10.95□□□□□ -0.66
CD40-204ENST00000466205 C1RP00736 705 aa10.95□□□□□ -0.66
CD40-204ENST00000466205 CYP11A1P05108 521 aa10.95□□□□□ -0.66
CD40-204ENST00000466205 MYL4P12829 197 aa10.95□□□□□ -0.66
CD40-204ENST00000466205 COL9A1P20849 921 aa10.95□□□□□ -0.66
CD40-204ENST00000466205 HOXA9P31269 272 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms