RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 PXMP2Q9NR77 195 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 NUDT5Q9UKK9 219 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 ATP11BQ9Y2G3 1177 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 MRPL11Q9Y3B7 192 aaKnown RBP5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 SIT1Q9Y3P8 196 aa5.52□□□□□ -1.53
EXOSC3-204ENST00000465860 GBF1Q92538 1859 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 PTPRSQ13332 1948 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 GOLGA8AA7E2F4 631 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 GOLGA8BA8MQT2 603 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 ZBTB43O43298 467 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 NPHS1O60500 1241 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 REC8O95072 547 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 FUCA1P04066 466 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 NTRK1P04629 796 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 MYCLP12524 364 aaPredicted RBP5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 PLS3P13797 630 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 PDIA3P30101 505 aaKnown RBP5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 MAGEA10P43363 369 aaPredicted RBP5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 CDK7P50613 346 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 NKX3-2P78367 333 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 CCT2P78371 535 aaKnown RBP5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 MRPS9P82933 396 aaKnown RBP5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 TLE2Q04725 743 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 SLC9A5Q14940 896 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 RTP5Q14D33 572 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 NTRK3Q16288 839 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 FSCN1Q16658 493 aaKnown RBP5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 DUSP28Q4G0W2 176 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 HABP4Q5JVS0 413 aaKnown RBP5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 NT5DC1Q5TFE4 455 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 IQSEC1Q6DN90 963 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 CXCL17Q6UXB2 119 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 RUFY3Q7L099 469 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 TMTC2Q8N394 836 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 BVESQ8NE79 360 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 CTCFLQ8NI51 663 aaPredicted RBP5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 USP33Q8TEY7 942 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 CPA5Q8WXQ8 436 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 PHKBQ93100 1093 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 ANAPC16Q96DE5 110 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 RRP36Q96EU6 259 aaKnown RBP5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 PGBD1Q96JS3 809 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 RMDN3Q96TC7 470 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 GDF15Q99988 308 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 PDCD2LQ9BRP1 358 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 LGR4Q9BXB1 951 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 TGIF2Q9GZN2 237 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 VTA1Q9NP79 307 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 ADD3Q9UEY8 706 aaKnown RBP5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 EYSQ5T1H1 3165 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 NID2Q14112 1375 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 TET1Q8NFU7 2136 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 SPTBN5Q9NRC6 3674 aaKnown RBP5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 COL6A3P12111 3177 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 SIP14410 1827 aa5.51□□□□□ -1.53
EXOSC3-204ENST00000465860 FRMPD4Q14CM0 1322 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 UMODL1Q5DID0 1318 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 EDIL3O43854 480 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 PQBP1O60828 265 aaKnown RBP5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 LARGE1O95461 756 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 THBDP07204 575 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 CALM1P0DP23 149 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 CALM2P0DP24 149 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 CALM3P0DP25 149 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 TXNP10599 105 aaKnown RBP5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 SMARCA1P28370 1054 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 KIF5BP33176 963 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 METAP2P50579 478 aaKnown RBP eCLIP5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 EPHB4P54760 987 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 PURAQ00577 322 aaKnown RBP5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 NFKB2Q00653 900 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 ARHGAP1Q07960 439 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 CYP4F3Q08477 520 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 STK3Q13188 491 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 KRT32Q14532 448 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 STXBP2Q15833 593 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 ARHGEF16Q5VV41 709 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 BLOC1S2Q6QNY1 142 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 NOL8Q76FK4 1167 aaKnown RBP5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 HEATR3Q7Z4Q2 680 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 RNF180Q86T96 592 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 MCF2L2Q86YR7 1114 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 FBXL16Q8N461 479 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 SLC43A3Q8NBI5 491 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 PLEKHO2Q8TD55 490 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 NSUN6Q8TEA1 469 aaKnown RBP5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 KAT2BQ92831 832 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 AIFM3Q96NN9 605 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 CTAGE1Q96RT6 745 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 BDH2Q9BUT1 245 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 SPATA6Q9NWH7 488 aaPredicted RBP5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 TMEM260Q9NX78 707 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 STRIP2Q9ULQ0 834 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 NAP1L2Q9ULW6 460 aaPredicted RBP5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 INPP5FQ9Y2H2 1132 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 NR2E3Q9Y5X4 410 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 REV3LO60673 3130 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 LOXHD1Q8IVV2 1947 aa5.5□□□□□ -1.53
EXOSC3-204ENST00000465860 TANC1Q9C0D5 1861 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms