RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 CLDND1Q9NY35 253 aa12.78□□□□□ -0.36
APTX-213ENST00000465003 R3HCC1Q9Y3T6 440 aaKnown RBP12.78□□□□□ -0.36
APTX-213ENST00000465003 M0QZQ0 153 aa12.77□□□□□ -0.37
APTX-213ENST00000465003 TRAPPC3O43617 180 aa12.77□□□□□ -0.37
APTX-213ENST00000465003 CCDC192P0DO97 292 aa12.77□□□□□ -0.37
APTX-213ENST00000465003 PTMSP20962 102 aa12.77□□□□□ -0.37
APTX-213ENST00000465003 ACAT1P24752 427 aaKnown RBP12.77□□□□□ -0.37
APTX-213ENST00000465003 KLRC2P26717 231 aa12.77□□□□□ -0.37
APTX-213ENST00000465003 ERCC5P28715 1186 aaPredicted RBP12.77□□□□□ -0.37
APTX-213ENST00000465003 CDH8P55286 799 aa12.77□□□□□ -0.37
APTX-213ENST00000465003 APBA1Q02410 837 aa12.77□□□□□ -0.37
APTX-213ENST00000465003 LRMPQ12912 555 aa12.77□□□□□ -0.37
APTX-213ENST00000465003 ORC1Q13415 861 aa12.77□□□□□ -0.37
APTX-213ENST00000465003 ZNF699Q32M78 642 aa12.77□□□□□ -0.37
APTX-213ENST00000465003 SV2CQ496J9 727 aa12.77□□□□□ -0.37
APTX-213ENST00000465003 C15orf39Q6ZRI6 1047 aa12.77□□□□□ -0.37
APTX-213ENST00000465003 PGLYRP2Q96PD5 576 aa12.77□□□□□ -0.37
APTX-213ENST00000465003 KLHL5Q96PQ7 755 aa12.77□□□□□ -0.37
APTX-213ENST00000465003 SMYD3Q9H7B4 428 aa12.77□□□□□ -0.37
APTX-213ENST00000465003 APOBEC3GQ9HC16 384 aaKnown RBP12.77□□□□□ -0.37
APTX-213ENST00000465003 HCFC2Q9Y5Z7 792 aa12.77□□□□□ -0.37
APTX-213ENST00000465003 H3BQ06 376 aaPredicted RBP12.76□□□□□ -0.37
APTX-213ENST00000465003 IKBKBO14920 756 aa12.76□□□□□ -0.37
APTX-213ENST00000465003 CLASP2O75122 1294 aaKnown RBP12.76□□□□□ -0.37
APTX-213ENST00000465003 TBX10O75333 385 aa12.76□□□□□ -0.37
APTX-213ENST00000465003 OR1D2P34982 312 aa12.76□□□□□ -0.37
APTX-213ENST00000465003 TFF2Q03403 129 aa12.76□□□□□ -0.37
APTX-213ENST00000465003 YWHAHQ04917 246 aaPredicted RBP12.76□□□□□ -0.37
APTX-213ENST00000465003 ELAVL2Q12926 359 aaKnown RBP12.76□□□□□ -0.37
APTX-213ENST00000465003 SOWAHAQ2M3V2 549 aa12.76□□□□□ -0.37
APTX-213ENST00000465003 SKOR2Q2VWA4 1001 aaPredicted RBP12.76□□□□□ -0.37
APTX-213ENST00000465003 CTXN3Q4LDR2 81 aa12.76□□□□□ -0.37
APTX-213ENST00000465003 TRIM59Q8IWR1 403 aa12.76□□□□□ -0.37
APTX-213ENST00000465003 PDCL2Q8N4E4 241 aa12.76□□□□□ -0.37
APTX-213ENST00000465003 LRRC52Q8N7C0 313 aa12.76□□□□□ -0.37
APTX-213ENST00000465003 OR10T2Q8NGX3 314 aa12.76□□□□□ -0.37
APTX-213ENST00000465003 TSPAN18Q96SJ8 248 aa12.76□□□□□ -0.37
APTX-213ENST00000465003 LPIN3Q9BQK8 851 aa12.76□□□□□ -0.37
APTX-213ENST00000465003 TMEM8AQ9HCN3 771 aa12.76□□□□□ -0.37
APTX-213ENST00000465003 PCDHB8Q9UN66 801 aa12.76□□□□□ -0.37
APTX-213ENST00000465003 STXBP5LQ9Y2K9 1186 aa12.76□□□□□ -0.37
APTX-213ENST00000465003 NME7Q9Y5B8 376 aa12.76□□□□□ -0.37
APTX-213ENST00000465003 PES1O00541 588 aaKnown RBP12.76□□□□□ -0.37
APTX-213ENST00000465003 ODC1P11926 461 aa12.76□□□□□ -0.37
APTX-213ENST00000465003 POU3F3P20264 500 aaPredicted RBP12.76□□□□□ -0.37
APTX-213ENST00000465003 MTIF2P46199 727 aaKnown RBP12.76□□□□□ -0.37
APTX-213ENST00000465003 KCNH2Q12809 1159 aa12.76□□□□□ -0.37
APTX-213ENST00000465003 MYO1EQ12965 1108 aa12.76□□□□□ -0.37
APTX-213ENST00000465003 NCAPHQ15003 741 aa12.76□□□□□ -0.37
APTX-213ENST00000465003 PTPN21Q16825 1174 aa12.76□□□□□ -0.37
APTX-213ENST00000465003 DUSP6Q16828 381 aa12.76□□□□□ -0.37
APTX-213ENST00000465003 KRT39Q6A163 491 aa12.76□□□□□ -0.37
APTX-213ENST00000465003 OVOS1Q6IE37 1185 aa12.76□□□□□ -0.37
APTX-213ENST00000465003 FRMD5Q7Z6J6 570 aa12.76□□□□□ -0.37
APTX-213ENST00000465003 OSTM1Q86WC4 334 aa12.76□□□□□ -0.37
APTX-213ENST00000465003 DHX40Q8IX18 779 aaKnown RBP12.76□□□□□ -0.37
APTX-213ENST00000465003 C12orf76Q8N812 135 aaPredicted RBP12.76□□□□□ -0.37
APTX-213ENST00000465003 PIK3R5Q8WYR1 880 aa12.76□□□□□ -0.37
APTX-213ENST00000465003 ARID3AQ99856 593 aa12.76□□□□□ -0.37
APTX-213ENST00000465003 RTP3Q9BQQ7 232 aa12.76□□□□□ -0.37
APTX-213ENST00000465003 MRPL45Q9BRJ2 306 aaKnown RBP12.76□□□□□ -0.37
APTX-213ENST00000465003 CRACR2AQ9BSW2 395 aa12.76□□□□□ -0.37
APTX-213ENST00000465003 SDCBP2Q9H190 292 aa12.76□□□□□ -0.37
APTX-213ENST00000465003 HSD3B7Q9H2F3 369 aa12.76□□□□□ -0.37
APTX-213ENST00000465003 FBXL5Q9UKA1 691 aa12.76□□□□□ -0.37
APTX-213ENST00000465003 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.76□□□□□ -0.37
APTX-213ENST00000465003 KCNJ18B7U540 433 aa12.75□□□□□ -0.37
APTX-213ENST00000465003 TGM5O43548 720 aa12.75□□□□□ -0.37
APTX-213ENST00000465003 WEE2P0C1S8 567 aa12.75□□□□□ -0.37
APTX-213ENST00000465003 ATP1A3P13637 1013 aa12.75□□□□□ -0.37
APTX-213ENST00000465003 LMO2P25791 158 aa12.75□□□□□ -0.37
APTX-213ENST00000465003 PNPLA4P41247 253 aa12.75□□□□□ -0.37
APTX-213ENST00000465003 FMO5P49326 533 aa12.75□□□□□ -0.37
APTX-213ENST00000465003 CLCN4P51793 760 aa12.75□□□□□ -0.37
APTX-213ENST00000465003 PSMC1P62191 440 aaKnown RBP12.75□□□□□ -0.37
APTX-213ENST00000465003 NOP14P78316 857 aaKnown RBP12.75□□□□□ -0.37
APTX-213ENST00000465003 MYL7Q01449 175 aa12.75□□□□□ -0.37
APTX-213ENST00000465003 KCNJ12Q14500 433 aa12.75□□□□□ -0.37
APTX-213ENST00000465003 USP37Q86T82 979 aa12.75□□□□□ -0.37
APTX-213ENST00000465003 LUZP1Q86V48 1076 aa12.75□□□□□ -0.37
APTX-213ENST00000465003 ADGRF2Q8IZF7 708 aa12.75□□□□□ -0.37
APTX-213ENST00000465003 KBTBD7Q8WVZ9 684 aa12.75□□□□□ -0.37
APTX-213ENST00000465003 TAB2Q9NYJ8 693 aa12.75□□□□□ -0.37
APTX-213ENST00000465003 LMCD1Q9NZU5 365 aa12.75□□□□□ -0.37
APTX-213ENST00000465003 MTRRQ9UBK8 725 aa12.75□□□□□ -0.37
APTX-213ENST00000465003 HMGXB4Q9UGU5 601 aa12.75□□□□□ -0.37
APTX-213ENST00000465003 IRAK3Q9Y616 596 aa12.75□□□□□ -0.37
APTX-213ENST00000465003 WDR27A2RRH5 827 aa12.74□□□□□ -0.37
APTX-213ENST00000465003 SYN3O14994 580 aa12.74□□□□□ -0.37
APTX-213ENST00000465003 HUS1O60921 280 aa12.74□□□□□ -0.37
APTX-213ENST00000465003 ATP2C2O75185 946 aa12.74□□□□□ -0.37
APTX-213ENST00000465003 PDGFRBP09619 1106 aa12.74□□□□□ -0.37
APTX-213ENST00000465003 CPB1P15086 417 aa12.74□□□□□ -0.37
APTX-213ENST00000465003 KCNA5P22460 613 aa12.74□□□□□ -0.37
APTX-213ENST00000465003 LTBRP36941 435 aa12.74□□□□□ -0.37
APTX-213ENST00000465003 NDUFV1P49821 464 aa12.74□□□□□ -0.37
APTX-213ENST00000465003 ZNF165P49910 485 aa12.74□□□□□ -0.37
APTX-213ENST00000465003 TNNC1P63316 161 aa12.74□□□□□ -0.37
APTX-213ENST00000465003 MYL5Q02045 173 aa12.74□□□□□ -0.37
APTX-213ENST00000465003 ANKS3Q6ZW76 656 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms