RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 TATDN1Q6P1N9 297 aa7.71□□□□□ -1.17
USP48-206ENST00000464577 RFWD3Q6PCD5 774 aa7.71□□□□□ -1.17
USP48-206ENST00000464577 LVRNQ6Q4G3 990 aa7.71□□□□□ -1.17
USP48-206ENST00000464577 LRRC74BQ6ZQY2 392 aa7.71□□□□□ -1.17
USP48-206ENST00000464577 MTDHQ86UE4 582 aaKnown RBP7.71□□□□□ -1.17
USP48-206ENST00000464577 C4orf33Q8N1A6 199 aa7.71□□□□□ -1.17
USP48-206ENST00000464577 CERS5Q8N5B7 392 aa7.71□□□□□ -1.17
USP48-206ENST00000464577 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.71□□□□□ -1.17
USP48-206ENST00000464577 DHX38Q92620 1227 aaKnown RBP7.71□□□□□ -1.17
USP48-206ENST00000464577 ALKBH8Q96BT7 664 aaKnown RBP7.71□□□□□ -1.17
USP48-206ENST00000464577 NSL1Q96IY1 281 aa7.71□□□□□ -1.17
USP48-206ENST00000464577 RIT2Q99578 217 aa7.71□□□□□ -1.17
USP48-206ENST00000464577 SYNCQ9H7C4 482 aa7.71□□□□□ -1.17
USP48-206ENST00000464577 PDP2Q9P2J9 529 aa7.71□□□□□ -1.17
USP48-206ENST00000464577 STX18Q9P2W9 335 aaKnown RBP7.71□□□□□ -1.17
USP48-206ENST00000464577 ZNF212Q9UDV6 495 aa7.71□□□□□ -1.17
USP48-206ENST00000464577 SHOC2Q9UQ13 582 aa7.71□□□□□ -1.17
USP48-206ENST00000464577 ADAMTSL1Q8N6G6 1762 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 EIF4E1BA6NMX2 242 aaKnown RBP7.71□□□□□ -1.18
USP48-206ENST00000464577 A8MXQ7 604 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 ATP2A1O14983 1001 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 GSC2O15499 205 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 MAP3K13O43283 966 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 ATP9AO75110 1047 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 TGDSO95455 350 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 PSMG1O95456 288 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 IL1BP01584 269 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 CYP1A1P04798 512 aaPredicted RBP7.71□□□□□ -1.18
USP48-206ENST00000464577 VIL1P09327 827 aaKnown RBP7.71□□□□□ -1.18
USP48-206ENST00000464577 POLR2MP0CAP2 368 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 HOXA10P31260 410 aaPredicted RBP7.71□□□□□ -1.18
USP48-206ENST00000464577 CETN2P41208 172 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 NCKAP1LP55160 1127 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 IKQ13123 557 aaPredicted RBP7.71□□□□□ -1.18
USP48-206ENST00000464577 DYNC1I2Q13409 638 aaKnown RBP7.71□□□□□ -1.18
USP48-206ENST00000464577 RCN2Q14257 317 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 ACSBG2Q5FVE4 666 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 LIN9Q5TKA1 542 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 APOBEC3HQ6NTF7 200 aaKnown RBP7.71□□□□□ -1.18
USP48-206ENST00000464577 PPP1R2P3Q6NXS1 205 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 CENPUQ71F23 418 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 GSTA5Q7RTV2 222 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 ARHGAP24Q8N264 748 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 ALLCQ8N6M5 410 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.71□□□□□ -1.18
USP48-206ENST00000464577 PPFIBP2Q8ND30 876 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 FBXL13Q8NEE6 735 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 RNF217Q8TC41 542 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 UCMAQ8WVF2 138 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 NRG4Q8WWG1 115 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 SCG3Q8WXD2 468 aaKnown RBP7.71□□□□□ -1.18
USP48-206ENST00000464577 TEKT1Q969V4 418 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 SKA1Q96BD8 255 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 NR1H4Q96RI1 486 aaPredicted RBP7.71□□□□□ -1.18
USP48-206ENST00000464577 ZNF577Q9BSK1 485 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 DHRS4Q9BTZ2 278 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 HEMGNQ9BXL5 484 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 MAK16Q9BXY0 300 aaKnown RBP7.71□□□□□ -1.18
USP48-206ENST00000464577 TRIM4Q9C037 500 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 VPS11Q9H270 941 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 VPS37BQ9H9H4 285 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 NPHS2Q9NP85 383 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 DDX43Q9NXZ2 648 aaKnown RBP7.71□□□□□ -1.18
USP48-206ENST00000464577 EXOC7Q9UPT5 735 aa7.71□□□□□ -1.18
USP48-206ENST00000464577 DRG1Q9Y295 367 aaKnown RBP7.71□□□□□ -1.18
USP48-206ENST00000464577 MTO1Q9Y2Z2 717 aaKnown RBP7.71□□□□□ -1.18
USP48-206ENST00000464577 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.71□□□□□ -1.18
USP48-206ENST00000464577 MYPNQ86TC9 1320 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 RGPD3A6NKT7 1758 aaPredicted RBP7.7□□□□□ -1.18
USP48-206ENST00000464577 RGPD4Q7Z3J3 1758 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 MAP3K7O43318 606 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 KRT36O76013 467 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 TJP3O95049 919 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 LYPLA2O95372 231 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 FGFR1P11362 822 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 TAL1P17542 331 aaPredicted RBP7.7□□□□□ -1.18
USP48-206ENST00000464577 PTPN7P35236 360 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 CACNA2D1P54289 1103 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 GEMIN4P57678 1058 aaKnown RBP7.7□□□□□ -1.18
USP48-206ENST00000464577 BPIFB4P59827 614 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 CDK16Q00536 496 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 NFIAQ12857 509 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 KPNB1Q14974 876 aaKnown RBP7.7□□□□□ -1.18
USP48-206ENST00000464577 SNRNP35Q16560 246 aaKnown RBP7.7□□□□□ -1.18
USP48-206ENST00000464577 MAPK6Q16659 721 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 PLEKHG4Q58EX7 1191 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 PPP1R15BQ5SWA1 713 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 RNASEH2BQ5TBB1 312 aaKnown RBP7.7□□□□□ -1.18
USP48-206ENST00000464577 DAB2IPQ5VWQ8 1189 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 SLC30A10Q6XR72 485 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 DSTYKQ6XUX3 929 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 TRIM72Q6ZMU5 477 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 MON1BQ7L1V2 547 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 HAUS6Q7Z4H7 955 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 USP37Q86T82 979 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 AMIGO3Q86WK7 504 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 CHSY1Q86X52 802 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 ARHGAP18Q8N392 663 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 ZNF276Q8N554 614 aa7.7□□□□□ -1.18
USP48-206ENST00000464577 ZSWIM2Q8NEG5 633 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms