RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 RBP5P82980 135 aa18.36■□□□□ 0.53
VPS52-215ENST00000464425 SV2CQ496J9 727 aa18.36■□□□□ 0.53
VPS52-215ENST00000464425 LIN9Q5TKA1 542 aa18.36■□□□□ 0.53
VPS52-215ENST00000464425 CEP135Q66GS9 1140 aa18.36■□□□□ 0.53
VPS52-215ENST00000464425 OVOS1Q6IE37 1185 aa18.36■□□□□ 0.53
VPS52-215ENST00000464425 WDR49Q8IV35 697 aa18.36■□□□□ 0.53
VPS52-215ENST00000464425 SLC9A9Q8IVB4 645 aa18.36■□□□□ 0.53
VPS52-215ENST00000464425 CMASQ8NFW8 434 aaPredicted RBP18.36■□□□□ 0.53
VPS52-215ENST00000464425 CXorf38Q8TB03 319 aa18.36■□□□□ 0.53
VPS52-215ENST00000464425 TMEM174Q8WUU8 243 aa18.36■□□□□ 0.53
VPS52-215ENST00000464425 BORCS6Q96GS4 357 aa18.36■□□□□ 0.53
VPS52-215ENST00000464425 ZNF560Q96MR9 790 aa18.36■□□□□ 0.53
VPS52-215ENST00000464425 NECTIN4Q96NY8 510 aa18.36■□□□□ 0.53
VPS52-215ENST00000464425 TMEM63CQ9P1W3 806 aa18.36■□□□□ 0.53
VPS52-215ENST00000464425 TRAF3IP3Q9Y228 551 aa18.36■□□□□ 0.53
VPS52-215ENST00000464425 R3HCC1Q9Y3T6 440 aaKnown RBP18.36■□□□□ 0.53
VPS52-215ENST00000464425 MUC3AQ02505 3323 aa18.35■□□□□ 0.53
VPS52-215ENST00000464425 WDR27A2RRH5 827 aa18.35■□□□□ 0.53
VPS52-215ENST00000464425 C19orf67A6NJJ6 358 aa18.35■□□□□ 0.53
VPS52-215ENST00000464425 C8AP07357 584 aa18.35■□□□□ 0.53
VPS52-215ENST00000464425 PNPLA4P41247 253 aa18.35■□□□□ 0.53
VPS52-215ENST00000464425 PRCPP42785 496 aa18.35■□□□□ 0.53
VPS52-215ENST00000464425 BFSP1Q12934 665 aa18.35■□□□□ 0.53
VPS52-215ENST00000464425 PPM1LQ5SGD2 360 aa18.35■□□□□ 0.53
VPS52-215ENST00000464425 WSCD1Q658N2 575 aa18.35■□□□□ 0.53
VPS52-215ENST00000464425 ZNF461Q8TAF7 563 aa18.35■□□□□ 0.53
VPS52-215ENST00000464425 SLC7A14Q8TBB6 771 aa18.35■□□□□ 0.53
VPS52-215ENST00000464425 SMG7Q92540 1137 aaKnown RBP18.35■□□□□ 0.53
VPS52-215ENST00000464425 ZNF707Q96C28 371 aaPredicted RBP18.35■□□□□ 0.53
VPS52-215ENST00000464425 CGRRF1Q99675 332 aa18.35■□□□□ 0.53
VPS52-215ENST00000464425 GZF1Q9H116 711 aaPredicted RBP18.35■□□□□ 0.53
VPS52-215ENST00000464425 PIDD1Q9HB75 910 aa18.35■□□□□ 0.53
VPS52-215ENST00000464425 BIN1O00499 593 aa18.34■□□□□ 0.53
VPS52-215ENST00000464425 ABLIM3O94929 683 aa18.34■□□□□ 0.53
VPS52-215ENST00000464425 OR4Q2P0C623 313 aa18.34■□□□□ 0.53
VPS52-215ENST00000464425 CPB1P15086 417 aa18.34■□□□□ 0.53
VPS52-215ENST00000464425 NR2F2P24468 414 aa18.34■□□□□ 0.53
VPS52-215ENST00000464425 ELF1P32519 619 aa18.34■□□□□ 0.53
VPS52-215ENST00000464425 STIM1Q13586 685 aa18.34■□□□□ 0.53
VPS52-215ENST00000464425 CAVIN1Q6NZI2 390 aaKnown RBP18.34■□□□□ 0.53
VPS52-215ENST00000464425 C15orf39Q6ZRI6 1047 aa18.34■□□□□ 0.53
VPS52-215ENST00000464425 TRAPPC11Q7Z392 1133 aa18.34■□□□□ 0.53
VPS52-215ENST00000464425 METTL23Q86XA0 190 aa18.34■□□□□ 0.53
VPS52-215ENST00000464425 ADSSL1Q8N142 457 aa18.34■□□□□ 0.53
VPS52-215ENST00000464425 PLEKHO2Q8TD55 490 aa18.34■□□□□ 0.53
VPS52-215ENST00000464425 ZNF516Q92618 1163 aa18.34■□□□□ 0.53
VPS52-215ENST00000464425 PRKD2Q9BZL6 878 aa18.34■□□□□ 0.53
VPS52-215ENST00000464425 ZDHHC7Q9NXF8 308 aa18.34■□□□□ 0.53
VPS52-215ENST00000464425 FRMD4BQ9Y2L6 1034 aa18.34■□□□□ 0.53
VPS52-215ENST00000464425 ARHGEF37A1IGU5 675 aa18.33■□□□□ 0.52
VPS52-215ENST00000464425 CCL16O15467 120 aa18.33■□□□□ 0.52
VPS52-215ENST00000464425 LETM1O95202 739 aaPredicted RBP18.33■□□□□ 0.52
VPS52-215ENST00000464425 CYP11A1P05108 521 aa18.33■□□□□ 0.52
VPS52-215ENST00000464425 ADAM9Q13443 819 aa18.33■□□□□ 0.52
VPS52-215ENST00000464425 MYBPC2Q14324 1141 aa18.33■□□□□ 0.52
VPS52-215ENST00000464425 RNF19BQ6ZMZ0 732 aa18.33■□□□□ 0.52
VPS52-215ENST00000464425 LRRC52Q8N7C0 313 aa18.33■□□□□ 0.52
VPS52-215ENST00000464425 DHTKD1Q96HY7 919 aaPredicted RBP18.33■□□□□ 0.52
VPS52-215ENST00000464425 HPDLQ96IR7 371 aa18.33■□□□□ 0.52
VPS52-215ENST00000464425 TMEM209Q96SK2 561 aa18.33■□□□□ 0.52
VPS52-215ENST00000464425 CYP4F11Q9HBI6 524 aa18.33■□□□□ 0.52
VPS52-215ENST00000464425 DSEQ9UL01 958 aa18.33■□□□□ 0.52
VPS52-215ENST00000464425 POLIQ9UNA4 740 aa18.33■□□□□ 0.52
VPS52-215ENST00000464425 SNX9Q9Y5X1 595 aa18.33■□□□□ 0.52
VPS52-215ENST00000464425 MTCL1Q9Y4B5 1905 aaKnown RBP18.32■□□□□ 0.52
VPS52-215ENST00000464425 OR6C75A6NL08 312 aa18.32■□□□□ 0.52
VPS52-215ENST00000464425 LRRIQ3A6PVS8 624 aaPredicted RBP18.32■□□□□ 0.52
VPS52-215ENST00000464425 LOC730098B7Z3J9 87 aa18.32■□□□□ 0.52
VPS52-215ENST00000464425 PPP1R3GB7ZBB8 358 aa18.32■□□□□ 0.52
VPS52-215ENST00000464425 PRRG1O14668 218 aa18.32■□□□□ 0.52
VPS52-215ENST00000464425 AKAP3O75969 853 aa18.32■□□□□ 0.52
VPS52-215ENST00000464425 SEC24AO95486 1093 aa18.32■□□□□ 0.52
VPS52-215ENST00000464425 CST3P01034 146 aaPredicted RBP18.32■□□□□ 0.52
VPS52-215ENST00000464425 ATF2P15336 505 aa18.32■□□□□ 0.52
VPS52-215ENST00000464425 RPL13P26373 211 aaKnown RBP18.32■□□□□ 0.52
VPS52-215ENST00000464425 CDR1P51861 262 aa18.32■□□□□ 0.52
VPS52-215ENST00000464425 DLG4P78352 724 aa18.32■□□□□ 0.52
VPS52-215ENST00000464425 ADCY1Q08828 1119 aa18.32■□□□□ 0.52
VPS52-215ENST00000464425 MYO1EQ12965 1108 aa18.32■□□□□ 0.52
VPS52-215ENST00000464425 NFIL3Q16649 462 aa18.32■□□□□ 0.52
VPS52-215ENST00000464425 UVSSAQ2YD98 709 aa18.32■□□□□ 0.52
VPS52-215ENST00000464425 TPGS2Q68CL5 300 aa18.32■□□□□ 0.52
VPS52-215ENST00000464425 CENPPQ6IPU0 288 aa18.32■□□□□ 0.52
VPS52-215ENST00000464425 CCDC149Q6ZUS6 474 aa18.32■□□□□ 0.52
VPS52-215ENST00000464425 MLKLQ8NB16 471 aa18.32■□□□□ 0.52
VPS52-215ENST00000464425 PARD3BQ8TEW8 1205 aa18.32■□□□□ 0.52
VPS52-215ENST00000464425 KHSRPQ92945 711 aaKnown RBP eCLIP18.32■□□□□ 0.52
VPS52-215ENST00000464425 EEF2KMTQ96G04 330 aa18.32■□□□□ 0.52
VPS52-215ENST00000464425 PGLYRP2Q96PD5 576 aa18.32■□□□□ 0.52
VPS52-215ENST00000464425 OXCT2Q9BYC2 517 aaPredicted RBP18.32■□□□□ 0.52
VPS52-215ENST00000464425 PSMA7O14818 248 aa18.31■□□□□ 0.52
VPS52-215ENST00000464425 HUS1O60921 280 aa18.31■□□□□ 0.52
VPS52-215ENST00000464425 PHACTR2O75167 634 aa18.31■□□□□ 0.52
VPS52-215ENST00000464425 HNRNPA1P09651 372 aaKnown RBP eCLIP18.31■□□□□ 0.52
VPS52-215ENST00000464425 NLRP12P59046 1061 aa18.31■□□□□ 0.52
VPS52-215ENST00000464425 ZCWPW2Q504Y3 356 aa18.31■□□□□ 0.52
VPS52-215ENST00000464425 FOXR2Q6PJQ5 311 aa18.31■□□□□ 0.52
VPS52-215ENST00000464425 CYP26C1Q6V0L0 522 aa18.31■□□□□ 0.52
VPS52-215ENST00000464425 THEM5Q8N1Q8 247 aa18.31■□□□□ 0.52
VPS52-215ENST00000464425 PDCL2Q8N4E4 241 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms