RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	OR4Q2	P0C623	313 aa		10.35	□□□□□ -0.75
PSMD4-208	ENST00000462970	MTHFR	P42898	656 aa		10.35	□□□□□ -0.75
PSMD4-208	ENST00000462970	ROR1	Q01973	937 aa		10.35	□□□□□ -0.75
PSMD4-208	ENST00000462970	ITIH3	Q06033	890 aa		10.35	□□□□□ -0.75
PSMD4-208	ENST00000462970	MYO1E	Q12965	1108 aa		10.35	□□□□□ -0.75
PSMD4-208	ENST00000462970	ADAM9	Q13443	819 aa		10.35	□□□□□ -0.75
PSMD4-208	ENST00000462970	RAB33A	Q14088	237 aa		10.35	□□□□□ -0.75
PSMD4-208	ENST00000462970	SMAD2	Q15796	467 aa	Known RBP	10.35	□□□□□ -0.75
PSMD4-208	ENST00000462970	WSCD1	Q658N2	575 aa		10.35	□□□□□ -0.75
PSMD4-208	ENST00000462970	SCARA3	Q6AZY7	606 aa		10.35	□□□□□ -0.75
PSMD4-208	ENST00000462970	TRAPPC11	Q7Z392	1133 aa		10.35	□□□□□ -0.75
PSMD4-208	ENST00000462970	SLC9A9	Q8IVB4	645 aa		10.35	□□□□□ -0.75
PSMD4-208	ENST00000462970	FAM186B	Q8IYM0	893 aa		10.35	□□□□□ -0.75
PSMD4-208	ENST00000462970	THEM5	Q8N1Q8	247 aa		10.35	□□□□□ -0.75
PSMD4-208	ENST00000462970	SLC7A14	Q8TBB6	771 aa		10.35	□□□□□ -0.75
PSMD4-208	ENST00000462970	FEZF2	Q8TBJ5	459 aa		10.35	□□□□□ -0.75
PSMD4-208	ENST00000462970	HPDL	Q96IR7	371 aa		10.35	□□□□□ -0.75
PSMD4-208	ENST00000462970	MFSD14A	Q96MC6	490 aa		10.35	□□□□□ -0.75
PSMD4-208	ENST00000462970	MMS19	Q96T76	1030 aa		10.35	□□□□□ -0.75
PSMD4-208	ENST00000462970	GTPBP4	Q9BZE4	634 aa	Known RBP	10.35	□□□□□ -0.75
PSMD4-208	ENST00000462970	ADAM7	Q9H2U9	754 aa		10.35	□□□□□ -0.75
PSMD4-208	ENST00000462970	PLEKHA4	Q9H4M7	779 aa		10.35	□□□□□ -0.75
PSMD4-208	ENST00000462970	DMAC2	Q9NW81	257 aa		10.35	□□□□□ -0.75
PSMD4-208	ENST00000462970	SIX4	Q9UIU6	781 aa		10.35	□□□□□ -0.75
PSMD4-208	ENST00000462970	DSE	Q9UL01	958 aa		10.35	□□□□□ -0.75
PSMD4-208	ENST00000462970	CTNND2	Q9UQB3	1225 aa		10.35	□□□□□ -0.75
PSMD4-208	ENST00000462970	TRAF3IP3	Q9Y228	551 aa		10.35	□□□□□ -0.75
PSMD4-208	ENST00000462970	SNX9	Q9Y5X1	595 aa		10.35	□□□□□ -0.75
PSMD4-208	ENST00000462970	XIRP2	A4UGR9	3374 aa		10.35	□□□□□ -0.75
PSMD4-208	ENST00000462970	TRIM49B	A6NDI0	452 aa		10.34	□□□□□ -0.75
PSMD4-208	ENST00000462970	OR6C75	A6NL08	312 aa		10.34	□□□□□ -0.75
PSMD4-208	ENST00000462970	LRRIQ3	A6PVS8	624 aa	Predicted RBP	10.34	□□□□□ -0.75
PSMD4-208	ENST00000462970	CETN3	O15182	167 aa		10.34	□□□□□ -0.75
PSMD4-208	ENST00000462970	ZMYND10	O75800	440 aa		10.34	□□□□□ -0.75
PSMD4-208	ENST00000462970	C8A	P07357	584 aa		10.34	□□□□□ -0.75
PSMD4-208	ENST00000462970	TRIM49	P0CI25	452 aa		10.34	□□□□□ -0.75
PSMD4-208	ENST00000462970	TRIM49C	P0CI26	452 aa		10.34	□□□□□ -0.75
PSMD4-208	ENST00000462970	EPB41	P11171	864 aa	Known RBP	10.34	□□□□□ -0.75
PSMD4-208	ENST00000462970	TYMP	P19971	482 aa		10.34	□□□□□ -0.75
PSMD4-208	ENST00000462970	PAX3	P23760	479 aa		10.34	□□□□□ -0.75
PSMD4-208	ENST00000462970	PSMC2	P35998	433 aa	Known RBP	10.34	□□□□□ -0.75
PSMD4-208	ENST00000462970	AARS	P49588	968 aa	Known RBP eCLIP	10.34	□□□□□ -0.75
PSMD4-208	ENST00000462970	DLG4	P78352	724 aa		10.34	□□□□□ -0.75
PSMD4-208	ENST00000462970	ANKRD40	Q6AI12	368 aa		10.34	□□□□□ -0.75
PSMD4-208	ENST00000462970	LILRA6	Q6PI73	481 aa		10.34	□□□□□ -0.75
PSMD4-208	ENST00000462970	RNF19B	Q6ZMZ0	732 aa		10.34	□□□□□ -0.75
PSMD4-208	ENST00000462970	CCDC149	Q6ZUS6	474 aa		10.34	□□□□□ -0.75
PSMD4-208	ENST00000462970	ADHFE1	Q8IWW8	467 aa		10.34	□□□□□ -0.75
PSMD4-208	ENST00000462970	LRRC52	Q8N7C0	313 aa		10.34	□□□□□ -0.75
PSMD4-208	ENST00000462970	PLEKHO2	Q8TD55	490 aa		10.34	□□□□□ -0.75
PSMD4-208	ENST00000462970	ZNF516	Q92618	1163 aa		10.34	□□□□□ -0.75
PSMD4-208	ENST00000462970	PGLYRP2	Q96PD5	576 aa		10.34	□□□□□ -0.75
PSMD4-208	ENST00000462970	POMK	Q9H5K3	350 aa		10.34	□□□□□ -0.75
PSMD4-208	ENST00000462970	CYP4F11	Q9HBI6	524 aa		10.34	□□□□□ -0.75
PSMD4-208	ENST00000462970	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	10.34	□□□□□ -0.75
PSMD4-208	ENST00000462970	FBXW11	Q9UKB1	542 aa		10.34	□□□□□ -0.75
PSMD4-208	ENST00000462970	MYO10	Q9HD67	2058 aa		10.34	□□□□□ -0.75
PSMD4-208	ENST00000462970	WDR27	A2RRH5	827 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	XYLB	O75191	536 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	AKAP3	O75969	853 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	OAZ2	O95190	189 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	LRG1	P02750	347 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	CD44	P16070	742 aa	Known RBP	10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	COL9A1	P20849	921 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	ACAT1	P24752	427 aa	Known RBP	10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	PIK3CA	P42336	1068 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	VAMP7	P51809	220 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	STX17	P56962	302 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	MYL6	P60660	151 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	TNNC1	P63316	161 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	ZP2	Q05996	745 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	ADCY1	Q08828	1119 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	MORC3	Q14149	939 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	MRPL58	Q14197	206 aa	Known RBP	10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	MYBPC2	Q14324	1141 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	EDRF1	Q3B7T1	1238 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	SLC39A12	Q504Y0	691 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	DCAF17	Q5H9S7	520 aa	Predicted RBP	10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	TCERG1L	Q5VWI1	586 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	SLC8B1	Q6J4K2	584 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	SCARA5	Q6ZMJ2	495 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	GPR149	Q86SP6	731 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	ELOA2	Q8IYF1	753 aa	Predicted RBP	10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	ADGRF2	Q8IZF7	708 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	ADSSL1	Q8N142	457 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	GJD3	Q8N144	294 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	ZNF461	Q8TAF7	563 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	SPATA20	Q8TB22	786 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	TMC2	Q8TDI7	906 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	PARD3B	Q8TEW8	1205 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	HDAC7	Q8WUI4	952 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	NELFB	Q8WX92	580 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	SUSD6	Q92537	303 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	KHSRP	Q92945	711 aa	Known RBP eCLIP	10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	ELMO3	Q96BJ8	720 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	NECTIN4	Q96NY8	510 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	TMEM209	Q96SK2	561 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	PHF7	Q9BWX1	381 aa	Predicted RBP	10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	PRKD2	Q9BZL6	878 aa		10.33	□□□□□ -0.76
PSMD4-208	ENST00000462970	NUP62CL	Q9H1M0	184 aa		10.33	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms