RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 BDP1A6H8Y1 2624 aa13.02□□□□□ -0.32
HPS1-206ENST00000462743 OR6C75A6NL08 312 aa13.02□□□□□ -0.33
HPS1-206ENST00000462743 CST3P01034 146 aaPredicted RBP13.02□□□□□ -0.33
HPS1-206ENST00000462743 C4BPAP04003 597 aaKnown RBP13.02□□□□□ -0.33
HPS1-206ENST00000462743 HNRNPA1P09651 372 aaKnown RBP eCLIP13.02□□□□□ -0.33
HPS1-206ENST00000462743 ATF2P15336 505 aa13.02□□□□□ -0.33
HPS1-206ENST00000462743 TNNI1P19237 187 aa13.02□□□□□ -0.33
HPS1-206ENST00000462743 BMP6P22004 513 aa13.02□□□□□ -0.33
HPS1-206ENST00000462743 NR2F2P24468 414 aa13.02□□□□□ -0.33
HPS1-206ENST00000462743 POLR2BP30876 1174 aaKnown RBP13.02□□□□□ -0.33
HPS1-206ENST00000462743 ROR1Q01973 937 aa13.02□□□□□ -0.33
HPS1-206ENST00000462743 MORC3Q14149 939 aa13.02□□□□□ -0.33
HPS1-206ENST00000462743 CBX2Q14781 532 aaPredicted RBP13.02□□□□□ -0.33
HPS1-206ENST00000462743 RARS2Q5T160 578 aaKnown RBP13.02□□□□□ -0.33
HPS1-206ENST00000462743 SCARA3Q6AZY7 606 aa13.02□□□□□ -0.33
HPS1-206ENST00000462743 OVOS1Q6IE37 1185 aa13.02□□□□□ -0.33
HPS1-206ENST00000462743 USP37Q86T82 979 aa13.02□□□□□ -0.33
HPS1-206ENST00000462743 TCEAL8Q8IYN2 117 aa13.02□□□□□ -0.33
HPS1-206ENST00000462743 C12orf76Q8N812 135 aaPredicted RBP13.02□□□□□ -0.33
HPS1-206ENST00000462743 NOC3LQ8WTT2 800 aaKnown RBP13.02□□□□□ -0.33
HPS1-206ENST00000462743 ERCC4Q92889 916 aaPredicted RBP13.02□□□□□ -0.33
HPS1-206ENST00000462743 GBP4Q96PP9 640 aa13.02□□□□□ -0.33
HPS1-206ENST00000462743 UHRF1Q96T88 793 aaPredicted RBP13.02□□□□□ -0.33
HPS1-206ENST00000462743 POP1Q99575 1024 aaKnown RBP13.02□□□□□ -0.33
HPS1-206ENST00000462743 PRKD2Q9BZL6 878 aa13.02□□□□□ -0.33
HPS1-206ENST00000462743 MTMR12Q9C0I1 747 aa13.02□□□□□ -0.33
HPS1-206ENST00000462743 KIAA1468Q9P260 1216 aa13.02□□□□□ -0.33
HPS1-206ENST00000462743 AFF4Q9UHB7 1163 aaKnown RBP13.02□□□□□ -0.33
HPS1-206ENST00000462743 C2orf16Q68DN1 1984 aa13.01□□□□□ -0.33
HPS1-206ENST00000462743 DOCK8Q8NF50 2099 aa13.01□□□□□ -0.33
HPS1-206ENST00000462743 CCDC195A0A1B0GUA6 201 aa13.01□□□□□ -0.33
HPS1-206ENST00000462743 WDR27A2RRH5 827 aa13.01□□□□□ -0.33
HPS1-206ENST00000462743 LOC730098B7Z3J9 87 aa13.01□□□□□ -0.33
HPS1-206ENST00000462743 PPP1R3GB7ZBB8 358 aa13.01□□□□□ -0.33
HPS1-206ENST00000462743 AKAP3O75969 853 aa13.01□□□□□ -0.33
HPS1-206ENST00000462743 SPATA31D3P0C874 917 aa13.01□□□□□ -0.33
HPS1-206ENST00000462743 DLATP10515 647 aaKnown RBP13.01□□□□□ -0.33
HPS1-206ENST00000462743 CCNE1P24864 410 aa13.01□□□□□ -0.33
HPS1-206ENST00000462743 ATICP31939 592 aa13.01□□□□□ -0.33
HPS1-206ENST00000462743 PSMC2P35998 433 aaKnown RBP13.01□□□□□ -0.33
HPS1-206ENST00000462743 FKBP3Q00688 224 aaKnown RBP13.01□□□□□ -0.33
HPS1-206ENST00000462743 ZP2Q05996 745 aa13.01□□□□□ -0.33
HPS1-206ENST00000462743 LRRC63Q05C16 580 aa13.01□□□□□ -0.33
HPS1-206ENST00000462743 MYO1EQ12965 1108 aa13.01□□□□□ -0.33
HPS1-206ENST00000462743 GPR17Q13304 367 aa13.01□□□□□ -0.33
HPS1-206ENST00000462743 LMBRD2Q68DH5 695 aaPredicted RBP13.01□□□□□ -0.33
HPS1-206ENST00000462743 SPATA31D4Q6ZUB0 917 aa13.01□□□□□ -0.33
HPS1-206ENST00000462743 CCDC149Q6ZUS6 474 aa13.01□□□□□ -0.33
HPS1-206ENST00000462743 INTS8Q75QN2 995 aaKnown RBP13.01□□□□□ -0.33
HPS1-206ENST00000462743 GLYCTKQ8IVS8 523 aa13.01□□□□□ -0.33
HPS1-206ENST00000462743 SMYD4Q8IYR2 804 aaPredicted RBP13.01□□□□□ -0.33
HPS1-206ENST00000462743 TMEM86AQ8N2M4 240 aa13.01□□□□□ -0.33
HPS1-206ENST00000462743 CCDC127Q96BQ5 260 aa13.01□□□□□ -0.33
HPS1-206ENST00000462743 ZNF707Q96C28 371 aaPredicted RBP13.01□□□□□ -0.33
HPS1-206ENST00000462743 VRTNQ9H8Y1 702 aa13.01□□□□□ -0.33
HPS1-206ENST00000462743 HSFX1Q9UBD0 423 aa13.01□□□□□ -0.33
HPS1-206ENST00000462743 USTQ9Y2C2 406 aa13.01□□□□□ -0.33
HPS1-206ENST00000462743 TIMM13Q9Y5L4 95 aaPredicted RBP13.01□□□□□ -0.33
HPS1-206ENST00000462743 NOTCH4Q99466 2003 aa13□□□□□ -0.33
HPS1-206ENST00000462743 LRRIQ3A6PVS8 624 aaPredicted RBP13□□□□□ -0.33
HPS1-206ENST00000462743 GABRDO14764 452 aa13□□□□□ -0.33
HPS1-206ENST00000462743 CETN3O15182 167 aa13□□□□□ -0.33
HPS1-206ENST00000462743 RFPL2O75678 378 aa13□□□□□ -0.33
HPS1-206ENST00000462743 SMARCB1Q12824 385 aa13□□□□□ -0.33
HPS1-206ENST00000462743 STIM1Q13586 685 aa13□□□□□ -0.33
HPS1-206ENST00000462743 C1orf220Q5T0J3 134 aa13□□□□□ -0.33
HPS1-206ENST00000462743 WSCD1Q658N2 575 aa13□□□□□ -0.33
HPS1-206ENST00000462743 CEP135Q66GS9 1140 aa13□□□□□ -0.33
HPS1-206ENST00000462743 ANKRD40Q6AI12 368 aa13□□□□□ -0.33
HPS1-206ENST00000462743 TMC5Q6UXY8 1006 aa13□□□□□ -0.33
HPS1-206ENST00000462743 METTL23Q86XA0 190 aa13□□□□□ -0.33
HPS1-206ENST00000462743 GJD3Q8N144 294 aa13□□□□□ -0.33
HPS1-206ENST00000462743 THEM5Q8N1Q8 247 aa13□□□□□ -0.33
HPS1-206ENST00000462743 TOP6BLQ8N6T0 577 aa13□□□□□ -0.33
HPS1-206ENST00000462743 HPDLQ96IR7 371 aa13□□□□□ -0.33
HPS1-206ENST00000462743 RTP3Q9BQQ7 232 aa13□□□□□ -0.33
HPS1-206ENST00000462743 R3HCC1Q9Y3T6 440 aaKnown RBP13□□□□□ -0.33
HPS1-206ENST00000462743 EYSQ5T1H1 3165 aa13□□□□□ -0.33
HPS1-206ENST00000462743 DLL1O00548 723 aa12.99□□□□□ -0.33
HPS1-206ENST00000462743 PSMA7O14818 248 aa12.99□□□□□ -0.33
HPS1-206ENST00000462743 HUS1O60921 280 aa12.99□□□□□ -0.33
HPS1-206ENST00000462743 C8AP07357 584 aa12.99□□□□□ -0.33
HPS1-206ENST00000462743 KRT19P08727 400 aa12.99□□□□□ -0.33
HPS1-206ENST00000462743 CD44P16070 742 aaKnown RBP12.99□□□□□ -0.33
HPS1-206ENST00000462743 ELF1P32519 619 aa12.99□□□□□ -0.33
HPS1-206ENST00000462743 GTF2H1P32780 548 aa12.99□□□□□ -0.33
HPS1-206ENST00000462743 VAMP7P51809 220 aa12.99□□□□□ -0.33
HPS1-206ENST00000462743 BFSP1Q12934 665 aa12.99□□□□□ -0.33
HPS1-206ENST00000462743 ZACNQ401N2 412 aa12.99□□□□□ -0.33
HPS1-206ENST00000462743 PPM1LQ5SGD2 360 aa12.99□□□□□ -0.33
HPS1-206ENST00000462743 LIN9Q5TKA1 542 aa12.99□□□□□ -0.33
HPS1-206ENST00000462743 SV2AQ7L0J3 742 aa12.99□□□□□ -0.33
HPS1-206ENST00000462743 FAM186BQ8IYM0 893 aa12.99□□□□□ -0.33
HPS1-206ENST00000462743 PDCL2Q8N4E4 241 aa12.99□□□□□ -0.33
HPS1-206ENST00000462743 FAM84AQ96KN4 292 aa12.99□□□□□ -0.33
HPS1-206ENST00000462743 NECAB3Q96P71 396 aaPredicted RBP12.99□□□□□ -0.33
HPS1-206ENST00000462743 TSG101Q99816 390 aa12.99□□□□□ -0.33
HPS1-206ENST00000462743 ACBD6Q9BR61 282 aa12.99□□□□□ -0.33
HPS1-206ENST00000462743 ZCWPW1Q9H0M4 648 aa12.99□□□□□ -0.33
HPS1-206ENST00000462743 XYLT2Q9H1B5 865 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms