RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 RHOBTB2Q9BYZ6 727 aa17.09■□□□□ 0.33
ERCC3-206ENST00000462306 POMKQ9H5K3 350 aa17.09■□□□□ 0.33
ERCC3-206ENST00000462306 ZDHHC7Q9NXF8 308 aa17.09■□□□□ 0.33
ERCC3-206ENST00000462306 MAN1B1Q9UKM7 699 aa17.09■□□□□ 0.33
ERCC3-206ENST00000462306 BDP1A6H8Y1 2624 aa17.09■□□□□ 0.33
ERCC3-206ENST00000462306 KRT19P08727 400 aa17.08■□□□□ 0.32
ERCC3-206ENST00000462306 NR2F2P24468 414 aa17.08■□□□□ 0.32
ERCC3-206ENST00000462306 ARPP19P56211 112 aa17.08■□□□□ 0.32
ERCC3-206ENST00000462306 CLDN10P78369 228 aa17.08■□□□□ 0.32
ERCC3-206ENST00000462306 CYP26C1Q6V0L0 522 aa17.08■□□□□ 0.32
ERCC3-206ENST00000462306 TRAPPC11Q7Z392 1133 aa17.08■□□□□ 0.32
ERCC3-206ENST00000462306 ADSSL1Q8N142 457 aa17.08■□□□□ 0.32
ERCC3-206ENST00000462306 GJD3Q8N144 294 aa17.08■□□□□ 0.32
ERCC3-206ENST00000462306 OXCT2Q9BYC2 517 aaPredicted RBP17.08■□□□□ 0.32
ERCC3-206ENST00000462306 GTPBP4Q9BZE4 634 aaKnown RBP17.08■□□□□ 0.32
ERCC3-206ENST00000462306 C5orf42Q9H799 3197 aa17.08■□□□□ 0.32
ERCC3-206ENST00000462306 TSC2P49815 1807 aa17.07■□□□□ 0.32
ERCC3-206ENST00000462306 ARHGEF37A1IGU5 675 aa17.07■□□□□ 0.32
ERCC3-206ENST00000462306 LRRIQ3A6PVS8 624 aaPredicted RBP17.07■□□□□ 0.32
ERCC3-206ENST00000462306 LOC730098B7Z3J9 87 aa17.07■□□□□ 0.32
ERCC3-206ENST00000462306 TNFRSF10AO00220 468 aa17.07■□□□□ 0.32
ERCC3-206ENST00000462306 MAPK13O15264 365 aa17.07■□□□□ 0.32
ERCC3-206ENST00000462306 AKAP3O75969 853 aa17.07■□□□□ 0.32
ERCC3-206ENST00000462306 C8AP07357 584 aa17.07■□□□□ 0.32
ERCC3-206ENST00000462306 ATF2P15336 505 aa17.07■□□□□ 0.32
ERCC3-206ENST00000462306 BMP6P22004 513 aa17.07■□□□□ 0.32
ERCC3-206ENST00000462306 UVSSAQ2YD98 709 aa17.07■□□□□ 0.32
ERCC3-206ENST00000462306 EDRF1Q3B7T1 1238 aa17.07■□□□□ 0.32
ERCC3-206ENST00000462306 LIN9Q5TKA1 542 aa17.07■□□□□ 0.32
ERCC3-206ENST00000462306 WSCD1Q658N2 575 aa17.07■□□□□ 0.32
ERCC3-206ENST00000462306 CEP135Q66GS9 1140 aa17.07■□□□□ 0.32
ERCC3-206ENST00000462306 TPGS2Q68CL5 300 aa17.07■□□□□ 0.32
ERCC3-206ENST00000462306 ISM2Q6H9L7 571 aa17.07■□□□□ 0.32
ERCC3-206ENST00000462306 CENPPQ6IPU0 288 aa17.07■□□□□ 0.32
ERCC3-206ENST00000462306 RTP3Q9BQQ7 232 aa17.07■□□□□ 0.32
ERCC3-206ENST00000462306 PRKD2Q9BZL6 878 aa17.07■□□□□ 0.32
ERCC3-206ENST00000462306 GDAP2Q9NXN4 497 aa17.07■□□□□ 0.32
ERCC3-206ENST00000462306 DSEQ9UL01 958 aa17.07■□□□□ 0.32
ERCC3-206ENST00000462306 FRMD4BQ9Y2L6 1034 aa17.07■□□□□ 0.32
ERCC3-206ENST00000462306 OR6C75A6NL08 312 aa17.06■□□□□ 0.32
ERCC3-206ENST00000462306 CST3P01034 146 aaPredicted RBP17.06■□□□□ 0.32
ERCC3-206ENST00000462306 HNRNPA1P09651 372 aaKnown RBP eCLIP17.06■□□□□ 0.32
ERCC3-206ENST00000462306 OR4Q2P0C623 313 aa17.06■□□□□ 0.32
ERCC3-206ENST00000462306 CD44P16070 742 aaKnown RBP17.06■□□□□ 0.32
ERCC3-206ENST00000462306 RPL13P26373 211 aaKnown RBP17.06■□□□□ 0.32
ERCC3-206ENST00000462306 HOXA9P31269 272 aa17.06■□□□□ 0.32
ERCC3-206ENST00000462306 PMS1P54277 932 aaKnown RBP17.06■□□□□ 0.32
ERCC3-206ENST00000462306 DLG4P78352 724 aa17.06■□□□□ 0.32
ERCC3-206ENST00000462306 BFSP1Q12934 665 aa17.06■□□□□ 0.32
ERCC3-206ENST00000462306 ADAM9Q13443 819 aa17.06■□□□□ 0.32
ERCC3-206ENST00000462306 MORC3Q14149 939 aa17.06■□□□□ 0.32
ERCC3-206ENST00000462306 PPM1LQ5SGD2 360 aa17.06■□□□□ 0.32
ERCC3-206ENST00000462306 RTL10Q7L3V2 364 aa17.06■□□□□ 0.32
ERCC3-206ENST00000462306 TCEAL8Q8IYN2 117 aa17.06■□□□□ 0.32
ERCC3-206ENST00000462306 OR10T2Q8NGX3 314 aa17.06■□□□□ 0.32
ERCC3-206ENST00000462306 SLC7A14Q8TBB6 771 aa17.06■□□□□ 0.32
ERCC3-206ENST00000462306 TMC2Q8TDI7 906 aa17.06■□□□□ 0.32
ERCC3-206ENST00000462306 SMG7Q92540 1137 aaKnown RBP17.06■□□□□ 0.32
ERCC3-206ENST00000462306 HPDLQ96IR7 371 aa17.06■□□□□ 0.32
ERCC3-206ENST00000462306 RPGRIP1Q96KN7 1286 aa17.06■□□□□ 0.32
ERCC3-206ENST00000462306 LMBRD1Q9NUN5 540 aa17.06■□□□□ 0.32
ERCC3-206ENST00000462306 AFF4Q9UHB7 1163 aaKnown RBP17.06■□□□□ 0.32
ERCC3-206ENST00000462306 L1RE1Q9UN81 338 aa17.06■□□□□ 0.32
ERCC3-206ENST00000462306 C2orf16Q68DN1 1984 aa17.06■□□□□ 0.32
ERCC3-206ENST00000462306 SEC24AO95486 1093 aa17.05■□□□□ 0.32
ERCC3-206ENST00000462306 VNN2O95498 520 aa17.05■□□□□ 0.32
ERCC3-206ENST00000462306 C4BPAP04003 597 aaKnown RBP17.05■□□□□ 0.32
ERCC3-206ENST00000462306 CPB1P15086 417 aa17.05■□□□□ 0.32
ERCC3-206ENST00000462306 SSTR3P32745 418 aaPredicted RBP17.05■□□□□ 0.32
ERCC3-206ENST00000462306 AP3M2P53677 418 aa17.05■□□□□ 0.32
ERCC3-206ENST00000462306 MCCD1P59942 119 aaPredicted RBP17.05■□□□□ 0.32
ERCC3-206ENST00000462306 MYO1EQ12965 1108 aa17.05■□□□□ 0.32
ERCC3-206ENST00000462306 GPR17Q13304 367 aa17.05■□□□□ 0.32
ERCC3-206ENST00000462306 CAMK4Q16566 473 aa17.05■□□□□ 0.32
ERCC3-206ENST00000462306 C1orf220Q5T0J3 134 aa17.05■□□□□ 0.32
ERCC3-206ENST00000462306 RNF19BQ6ZMZ0 732 aa17.05■□□□□ 0.32
ERCC3-206ENST00000462306 CCDC149Q6ZUS6 474 aa17.05■□□□□ 0.32
ERCC3-206ENST00000462306 LIMS2Q7Z4I7 341 aa17.05■□□□□ 0.32
ERCC3-206ENST00000462306 METTL23Q86XA0 190 aa17.05■□□□□ 0.32
ERCC3-206ENST00000462306 PDCL2Q8N4E4 241 aa17.05■□□□□ 0.32
ERCC3-206ENST00000462306 TMEM209Q96SK2 561 aa17.05■□□□□ 0.32
ERCC3-206ENST00000462306 MAFFQ9ULX9 164 aa17.05■□□□□ 0.32
ERCC3-206ENST00000462306 SNX9Q9Y5X1 595 aa17.05■□□□□ 0.32
ERCC3-206ENST00000462306 MUC3AQ02505 3323 aa17.04■□□□□ 0.32
ERCC3-206ENST00000462306 DENND4AQ7Z401 1863 aa17.04■□□□□ 0.32
ERCC3-206ENST00000462306 PPP1R3GB7ZBB8 358 aa17.04■□□□□ 0.32
ERCC3-206ENST00000462306 BIN1O00499 593 aa17.04■□□□□ 0.32
ERCC3-206ENST00000462306 HUS1O60921 280 aa17.04■□□□□ 0.32
ERCC3-206ENST00000462306 POU2F2P09086 479 aa17.04■□□□□ 0.32
ERCC3-206ENST00000462306 PSMC2P35998 433 aaKnown RBP17.04■□□□□ 0.32
ERCC3-206ENST00000462306 ADCY1Q08828 1119 aa17.04■□□□□ 0.32
ERCC3-206ENST00000462306 SOWAHAQ2M3V2 549 aa17.04■□□□□ 0.32
ERCC3-206ENST00000462306 TDRD10Q5VZ19 366 aaKnown RBP17.04■□□□□ 0.32
ERCC3-206ENST00000462306 ANKRD40Q6AI12 368 aa17.04■□□□□ 0.32
ERCC3-206ENST00000462306 ZC3H3Q8IXZ2 948 aaKnown RBP17.04■□□□□ 0.32
ERCC3-206ENST00000462306 FAM186BQ8IYM0 893 aa17.04■□□□□ 0.32
ERCC3-206ENST00000462306 TOP6BLQ8N6T0 577 aa17.04■□□□□ 0.32
ERCC3-206ENST00000462306 KHSRPQ92945 711 aaKnown RBP eCLIP17.04■□□□□ 0.32
ERCC3-206ENST00000462306 EEF2KMTQ96G04 330 aa17.04■□□□□ 0.32
ERCC3-206ENST00000462306 ZCWPW1Q9H0M4 648 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms