RNA–Protein interactions for RNA: ENST00000461974.1

FN1-215, Transcript of fibronectin 1, human

TSL 2

Gene FN1, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-215	ENST00000461974	SGCZ	Q96LD1	299 aa		4.9	□□□□□ -1.63
FN1-215	ENST00000461974	CDK5RAP1	Q96SZ6	601 aa	Known RBP	4.9	□□□□□ -1.63
FN1-215	ENST00000461974	NEU1	Q99519	415 aa		4.9	□□□□□ -1.63
FN1-215	ENST00000461974	P2RX7	Q99572	595 aa	Known RBP	4.9	□□□□□ -1.63
FN1-215	ENST00000461974	BDH2	Q9BUT1	245 aa		4.9	□□□□□ -1.63
FN1-215	ENST00000461974	SELENOO	Q9BVL4	669 aa		4.9	□□□□□ -1.63
FN1-215	ENST00000461974	BRIP1	Q9BX63	1249 aa		4.9	□□□□□ -1.63
FN1-215	ENST00000461974	RNPEP	Q9H4A4	650 aa		4.9	□□□□□ -1.63
FN1-215	ENST00000461974	STK32B	Q9NY57	414 aa		4.9	□□□□□ -1.63
FN1-215	ENST00000461974	COL20A1	Q9P218	1284 aa		4.9	□□□□□ -1.63
FN1-215	ENST00000461974	MARCH11	A6NNE9	402 aa		4.89	□□□□□ -1.63
FN1-215	ENST00000461974		E9PLN8	166 aa		4.89	□□□□□ -1.63
FN1-215	ENST00000461974	BTN3A1	O00481	513 aa		4.89	□□□□□ -1.63
FN1-215	ENST00000461974	EIF3J	O75822	258 aa	Known RBP	4.89	□□□□□ -1.63
FN1-215	ENST00000461974	SOAT2	O75908	522 aa		4.89	□□□□□ -1.63
FN1-215	ENST00000461974	RECQL4	O94761	1208 aa		4.89	□□□□□ -1.63
FN1-215	ENST00000461974	CYP2C9	P11712	490 aa		4.89	□□□□□ -1.63
FN1-215	ENST00000461974	XRCC6	P12956	609 aa	Known RBP eCLIP	4.89	□□□□□ -1.63
FN1-215	ENST00000461974	FDXR	P22570	491 aa		4.89	□□□□□ -1.63
FN1-215	ENST00000461974	KLRC1	P26715	233 aa		4.89	□□□□□ -1.63
FN1-215	ENST00000461974	KCNJ5	P48544	419 aa		4.89	□□□□□ -1.63
FN1-215	ENST00000461974	SLC11A2	P49281	568 aa		4.89	□□□□□ -1.63
FN1-215	ENST00000461974	ZNF135	P52742	658 aa	Predicted RBP	4.89	□□□□□ -1.63
FN1-215	ENST00000461974	SUMO3	P55854	103 aa	Predicted RBP	4.89	□□□□□ -1.63
FN1-215	ENST00000461974	NHLH2	Q02577	135 aa		4.89	□□□□□ -1.63
FN1-215	ENST00000461974	ZNF543	Q08ER8	600 aa		4.89	□□□□□ -1.63
FN1-215	ENST00000461974	SLC13A2	Q13183	592 aa		4.89	□□□□□ -1.63
FN1-215	ENST00000461974	RRP1B	Q14684	758 aa	Known RBP	4.89	□□□□□ -1.63
FN1-215	ENST00000461974	PRKD1	Q15139	912 aa	Predicted RBP	4.89	□□□□□ -1.63
FN1-215	ENST00000461974	TMPRSS9	Q7Z410	1059 aa		4.89	□□□□□ -1.63
FN1-215	ENST00000461974	USP37	Q86T82	979 aa		4.89	□□□□□ -1.63
FN1-215	ENST00000461974	TMPRSS6	Q8IU80	811 aa		4.89	□□□□□ -1.63
FN1-215	ENST00000461974	RNF152	Q8N8N0	203 aa		4.89	□□□□□ -1.63
FN1-215	ENST00000461974	PDPR	Q8NCN5	879 aa		4.89	□□□□□ -1.63
FN1-215	ENST00000461974	C20orf173	Q96LM9	149 aa		4.89	□□□□□ -1.63
FN1-215	ENST00000461974	CCDC138	Q96M89	665 aa		4.89	□□□□□ -1.63
FN1-215	ENST00000461974	MOGAT1	Q96PD6	335 aa		4.89	□□□□□ -1.63
FN1-215	ENST00000461974	VKORC1	Q9BQB6	163 aa		4.89	□□□□□ -1.63
FN1-215	ENST00000461974	SPATA5L1	Q9BVQ7	753 aa		4.89	□□□□□ -1.63
FN1-215	ENST00000461974	APOL5	Q9BWW9	433 aa		4.89	□□□□□ -1.63
FN1-215	ENST00000461974	SLAMF7	Q9NQ25	335 aa		4.89	□□□□□ -1.63
FN1-215	ENST00000461974	A1CF	Q9NQ94	594 aa	Known RBP	4.89	□□□□□ -1.63
FN1-215	ENST00000461974	SERHL	Q9NQF3	203 aa		4.89	□□□□□ -1.63
FN1-215	ENST00000461974	ETAA1	Q9NY74	926 aa		4.89	□□□□□ -1.63
FN1-215	ENST00000461974	CPNE7	Q9UBL6	633 aa		4.89	□□□□□ -1.63
FN1-215	ENST00000461974	SLC45A2	Q9UMX9	530 aa		4.89	□□□□□ -1.63
FN1-215	ENST00000461974	ATP11B	Q9Y2G3	1177 aa		4.89	□□□□□ -1.63
FN1-215	ENST00000461974	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	4.89	□□□□□ -1.63
FN1-215	ENST00000461974		A0A1W2PPC4	97 aa		4.88	□□□□□ -1.63
FN1-215	ENST00000461974	CLCA1	A8K7I4	914 aa		4.88	□□□□□ -1.63
FN1-215	ENST00000461974		K7ESM1	405 aa		4.88	□□□□□ -1.63
FN1-215	ENST00000461974	LEFTY2	O00292	366 aa		4.88	□□□□□ -1.63
FN1-215	ENST00000461974	TBC1D4	O60343	1298 aa		4.88	□□□□□ -1.63
FN1-215	ENST00000461974	FCER1A	P12319	257 aa		4.88	□□□□□ -1.63
FN1-215	ENST00000461974	SCNN1G	P51170	649 aa		4.88	□□□□□ -1.63
FN1-215	ENST00000461974	HTRA4	P83105	476 aa	Predicted RBP	4.88	□□□□□ -1.63
FN1-215	ENST00000461974	ZNF844	Q08AG5	666 aa		4.88	□□□□□ -1.63
FN1-215	ENST00000461974	CNGB1	Q14028	1251 aa	Predicted RBP	4.88	□□□□□ -1.63
FN1-215	ENST00000461974	TOB2	Q14106	344 aa	Predicted RBP	4.88	□□□□□ -1.63
FN1-215	ENST00000461974	FBLN7	Q53RD9	439 aa		4.88	□□□□□ -1.63
FN1-215	ENST00000461974	CRB2	Q5IJ48	1285 aa		4.88	□□□□□ -1.63
FN1-215	ENST00000461974	NOMO2	Q5JPE7	1267 aa		4.88	□□□□□ -1.63
FN1-215	ENST00000461974	FAM160B1	Q5W0V3	765 aa		4.88	□□□□□ -1.63
FN1-215	ENST00000461974	GDF7	Q7Z4P5	450 aa		4.88	□□□□□ -1.63
FN1-215	ENST00000461974	SRL	Q86TD4	932 aa		4.88	□□□□□ -1.63
FN1-215	ENST00000461974	GAS2L3	Q86XJ1	694 aa		4.88	□□□□□ -1.63
FN1-215	ENST00000461974	CFAP52	Q8N1V2	620 aa		4.88	□□□□□ -1.63
FN1-215	ENST00000461974	OR56A1	Q8NGH5	318 aa		4.88	□□□□□ -1.63
FN1-215	ENST00000461974	FUBP1	Q96AE4	644 aa	Known RBP	4.88	□□□□□ -1.63
FN1-215	ENST00000461974	ADO	Q96SZ5	270 aa		4.88	□□□□□ -1.63
FN1-215	ENST00000461974	SLC46A2	Q9BY10	475 aa		4.88	□□□□□ -1.63
FN1-215	ENST00000461974	KCNE5	Q9UJ90	142 aa		4.88	□□□□□ -1.63
FN1-215	ENST00000461974	SNX13	Q9Y5W8	968 aa		4.88	□□□□□ -1.63
FN1-215	ENST00000461974		A0A1B0GTW7	788 aa		4.87	□□□□□ -1.63
FN1-215	ENST00000461974	ABHD14A-ACY1	A0A1B0GW23	586 aa		4.87	□□□□□ -1.63
FN1-215	ENST00000461974		A0A1W2PS29	197 aa		4.87	□□□□□ -1.63
FN1-215	ENST00000461974	MUSK	O15146	869 aa		4.87	□□□□□ -1.63
FN1-215	ENST00000461974	PPFIA4	O75335	1185 aa		4.87	□□□□□ -1.63
FN1-215	ENST00000461974	PRSS23	O95084	383 aa		4.87	□□□□□ -1.63
FN1-215	ENST00000461974	UNC5C	O95185	931 aa		4.87	□□□□□ -1.63
FN1-215	ENST00000461974	PEX11B	O96011	259 aa		4.87	□□□□□ -1.63
FN1-215	ENST00000461974	CFI	P05156	583 aa		4.87	□□□□□ -1.63
FN1-215	ENST00000461974	GRP	P07492	148 aa		4.87	□□□□□ -1.63
FN1-215	ENST00000461974	APOBEC3A	P31941	199 aa	Predicted RBP	4.87	□□□□□ -1.63
FN1-215	ENST00000461974	PTTG1IP	P53801	180 aa		4.87	□□□□□ -1.63
FN1-215	ENST00000461974	PSMC1	P62191	440 aa	Known RBP	4.87	□□□□□ -1.63
FN1-215	ENST00000461974	EFEMP1	Q12805	493 aa		4.87	□□□□□ -1.63
FN1-215	ENST00000461974	CRHR2	Q13324	411 aa		4.87	□□□□□ -1.63
FN1-215	ENST00000461974	CTBP1	Q13363	440 aa		4.87	□□□□□ -1.63
FN1-215	ENST00000461974	AMOT	Q4VCS5	1084 aa		4.87	□□□□□ -1.63
FN1-215	ENST00000461974	RABL3	Q5HYI8	236 aa		4.87	□□□□□ -1.63
FN1-215	ENST00000461974	LRRC55	Q6ZSA7	311 aa		4.87	□□□□□ -1.63
FN1-215	ENST00000461974	POC1B	Q8TC44	478 aa		4.87	□□□□□ -1.63
FN1-215	ENST00000461974	PARD3B	Q8TEW8	1205 aa		4.87	□□□□□ -1.63
FN1-215	ENST00000461974	IPCEF1	Q8WWN9	437 aa	Predicted RBP	4.87	□□□□□ -1.63
FN1-215	ENST00000461974	LOXL4	Q96JB6	756 aa		4.87	□□□□□ -1.63
FN1-215	ENST00000461974	TBCB	Q99426	244 aa		4.87	□□□□□ -1.63
FN1-215	ENST00000461974	SMO	Q99835	787 aa		4.87	□□□□□ -1.63
FN1-215	ENST00000461974	EIF2A	Q9BY44	585 aa	Known RBP	4.87	□□□□□ -1.63
FN1-215	ENST00000461974	KRTAP3-1	Q9BYR8	98 aa		4.87	□□□□□ -1.63

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