RNA–Protein interactions for RNA: ENST00000461862.5

SCNM1-204, Transcript of sodium channel modifier 1, human

TSL 2

Gene SCNM1, Length 1,094 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCNM1-204	ENST00000461862	SOWAHD	A6NJG2	315 aa		11.17	□□□□□ -0.62
SCNM1-204	ENST00000461862	ANKRD63	C9JTQ0	380 aa		11.17	□□□□□ -0.62
SCNM1-204	ENST00000461862		H3BRB1	525 aa		11.17	□□□□□ -0.62
SCNM1-204	ENST00000461862	LINC01387	J3KSC0	135 aa		11.17	□□□□□ -0.62
SCNM1-204	ENST00000461862	F2	P00734	622 aa		11.17	□□□□□ -0.62
SCNM1-204	ENST00000461862	TMOD1	P28289	359 aa		11.17	□□□□□ -0.62
SCNM1-204	ENST00000461862	HOXD10	P28358	340 aa		11.17	□□□□□ -0.62
SCNM1-204	ENST00000461862	ADSS	P30520	456 aa		11.17	□□□□□ -0.62
SCNM1-204	ENST00000461862	GTF2H1	P32780	548 aa		11.17	□□□□□ -0.62
SCNM1-204	ENST00000461862	CYLC1	P35663	651 aa	Predicted RBP	11.17	□□□□□ -0.62
SCNM1-204	ENST00000461862	CPT1A	P50416	773 aa		11.17	□□□□□ -0.62
SCNM1-204	ENST00000461862	MYL7	Q01449	175 aa		11.17	□□□□□ -0.62
SCNM1-204	ENST00000461862	CETN1	Q12798	172 aa		11.17	□□□□□ -0.62
SCNM1-204	ENST00000461862	MTMR3	Q13615	1198 aa		11.17	□□□□□ -0.62
SCNM1-204	ENST00000461862	PKN2	Q16513	984 aa	Known RBP	11.17	□□□□□ -0.62
SCNM1-204	ENST00000461862	SNRNP35	Q16560	246 aa	Known RBP	11.17	□□□□□ -0.62
SCNM1-204	ENST00000461862	MAP3K21	Q5TCX8	1036 aa		11.17	□□□□□ -0.62
SCNM1-204	ENST00000461862	SLC39A4	Q6P5W5	647 aa		11.17	□□□□□ -0.62
SCNM1-204	ENST00000461862	PDXDC1	Q6P996	788 aa		11.17	□□□□□ -0.62
SCNM1-204	ENST00000461862		Q6ZS46	218 aa		11.17	□□□□□ -0.62
SCNM1-204	ENST00000461862	TLK2	Q86UE8	772 aa		11.17	□□□□□ -0.62
SCNM1-204	ENST00000461862	GPD1L	Q8N335	351 aa		11.17	□□□□□ -0.62
SCNM1-204	ENST00000461862	TMEM130	Q8N3G9	435 aa		11.17	□□□□□ -0.62
SCNM1-204	ENST00000461862	LINC01465	Q8N7H1	131 aa		11.17	□□□□□ -0.62
SCNM1-204	ENST00000461862	MRPL4	Q9BYD3	311 aa	Known RBP	11.17	□□□□□ -0.62
SCNM1-204	ENST00000461862	CCDC113	Q9H0I3	377 aa		11.17	□□□□□ -0.62
SCNM1-204	ENST00000461862	PCIF1	Q9H4Z3	704 aa		11.17	□□□□□ -0.62
SCNM1-204	ENST00000461862	TUT1	Q9H6E5	874 aa	Known RBP	11.17	□□□□□ -0.62
SCNM1-204	ENST00000461862	AGPAT5	Q9NUQ2	364 aa		11.17	□□□□□ -0.62
SCNM1-204	ENST00000461862	GCNT4	Q9P109	453 aa		11.17	□□□□□ -0.62
SCNM1-204	ENST00000461862	PPP2R2C	Q9Y2T4	447 aa		11.17	□□□□□ -0.62
SCNM1-204	ENST00000461862	SCO2	A0A1W2PP80	73 aa		11.16	□□□□□ -0.62
SCNM1-204	ENST00000461862	TISP43	B9A030	160 aa		11.16	□□□□□ -0.62
SCNM1-204	ENST00000461862	EPHB6	O15197	1021 aa		11.16	□□□□□ -0.62
SCNM1-204	ENST00000461862	EXTL3	O43909	919 aa		11.16	□□□□□ -0.62
SCNM1-204	ENST00000461862	SMNDC1	O75940	238 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
SCNM1-204	ENST00000461862	NOL4	O94818	638 aa		11.16	□□□□□ -0.62
SCNM1-204	ENST00000461862	LDHA	P00338	332 aa	Known RBP	11.16	□□□□□ -0.62
SCNM1-204	ENST00000461862	PDGFA	P04085	211 aa		11.16	□□□□□ -0.62
SCNM1-204	ENST00000461862	ZNF286B	P0CG31	522 aa		11.16	□□□□□ -0.62
SCNM1-204	ENST00000461862	AKR1A1	P14550	325 aa		11.16	□□□□□ -0.62
SCNM1-204	ENST00000461862	INSRR	P14616	1297 aa		11.16	□□□□□ -0.62
SCNM1-204	ENST00000461862	PON1	P27169	355 aa		11.16	□□□□□ -0.62
SCNM1-204	ENST00000461862	EIF1AX	P47813	144 aa	Known RBP	11.16	□□□□□ -0.62
SCNM1-204	ENST00000461862	PPFIA1	Q13136	1202 aa		11.16	□□□□□ -0.62
SCNM1-204	ENST00000461862	DRP2	Q13474	957 aa		11.16	□□□□□ -0.62
SCNM1-204	ENST00000461862	PTPN14	Q15678	1187 aa		11.16	□□□□□ -0.62
SCNM1-204	ENST00000461862	MAPK6	Q16659	721 aa		11.16	□□□□□ -0.62
SCNM1-204	ENST00000461862	DNTTIP2	Q5QJE6	756 aa	Known RBP	11.16	□□□□□ -0.62
SCNM1-204	ENST00000461862	MFSD14C	Q5VZR4	134 aa		11.16	□□□□□ -0.62
SCNM1-204	ENST00000461862	EFCAB12	Q6NXP0	572 aa		11.16	□□□□□ -0.62
SCNM1-204	ENST00000461862	WDR59	Q6PJI9	974 aa		11.16	□□□□□ -0.62
SCNM1-204	ENST00000461862	RAD9B	Q6WBX8	426 aa		11.16	□□□□□ -0.62
SCNM1-204	ENST00000461862	AGGF1	Q8N302	714 aa	eCLIP	11.16	□□□□□ -0.62
SCNM1-204	ENST00000461862	MFSD14A	Q96MC6	490 aa		11.16	□□□□□ -0.62
SCNM1-204	ENST00000461862	KATNAL1	Q9BW62	490 aa		11.16	□□□□□ -0.62
SCNM1-204	ENST00000461862	PBX4	Q9BYU1	374 aa		11.16	□□□□□ -0.62
SCNM1-204	ENST00000461862	AP5M1	Q9H0R1	490 aa		11.16	□□□□□ -0.62
SCNM1-204	ENST00000461862	MUC3B	Q9H195	1237 aa		11.16	□□□□□ -0.62
SCNM1-204	ENST00000461862	RNPEP	Q9H4A4	650 aa		11.16	□□□□□ -0.62
SCNM1-204	ENST00000461862	SUGCT	Q9HAC7	445 aa		11.16	□□□□□ -0.62
SCNM1-204	ENST00000461862	SSU72P8	A0A1W2PR75	194 aa		11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	CARNS1	A5YM72	827 aa		11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	ZNF233	A6NK53	670 aa		11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	LRRC53	A6NM62	1247 aa		11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	USP27X	A6NNY8	438 aa		11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	DYNC1LI2	O43237	492 aa	Predicted RBP	11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	KPNA6	O60684	536 aa		11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	IPO7	O95373	1038 aa	Known RBP	11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	WISP1	O95388	367 aa		11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	HMGCR	P04035	888 aa		11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	PRKCB	P05771	671 aa		11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	ADRB2	P07550	413 aa		11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	TRIM49	P0CI25	452 aa		11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	TRIM49C	P0CI26	452 aa		11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	ACPP	P15309	386 aa		11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	KLRC1	P26715	233 aa		11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	PRMT2	P55345	433 aa		11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	POLR2F	P61218	127 aa	Known RBP	11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	CYP24A1	Q07973	514 aa		11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	KLHDC7A	Q5VTJ3	777 aa		11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	SFMBT2	Q5VUG0	894 aa		11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	DPY19L2P1	Q6NXN4	242 aa		11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	TOGARAM2	Q6ZUX3	1019 aa		11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	RRAGA	Q7L523	313 aa		11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	CBWD2	Q8IUF1	395 aa		11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	LRRC71	Q8N4P6	559 aa		11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	C1orf127	Q8N9H9	656 aa		11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	RNF149	Q8NC42	400 aa		11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	DIS3L	Q8TF46	1054 aa	Known RBP	11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	C16orf45	Q96MC5	204 aa	Predicted RBP	11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	DEFB118	Q96PH6	123 aa		11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	CRACR2A	Q9BSW2	395 aa		11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	TRMT1	Q9NXH9	659 aa	Known RBP	11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	EPN1	Q9Y6I3	576 aa	Predicted RBP	11.15	□□□□□ -0.62
SCNM1-204	ENST00000461862	NRCAM	Q92823	1304 aa		11.14	□□□□□ -0.63
SCNM1-204	ENST00000461862		A0A0B4J269	797 aa		11.14	□□□□□ -0.63
SCNM1-204	ENST00000461862	EIF3CL	B5ME19	914 aa	Known RBP	11.14	□□□□□ -0.63
SCNM1-204	ENST00000461862	MSC	O60682	206 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 280.8 ms