RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 KARSQ15046 597 aaKnown RBP18.8■□□□□ 0.6
TOP3A-202ENST00000461127 PLK5Q496M5 336 aa18.8■□□□□ 0.6
TOP3A-202ENST00000461127 STXBP5Q5T5C0 1151 aa18.8■□□□□ 0.6
TOP3A-202ENST00000461127 GPR158Q5T848 1215 aa18.8■□□□□ 0.6
TOP3A-202ENST00000461127 BEST2Q8NFU1 509 aa18.8■□□□□ 0.6
TOP3A-202ENST00000461127 ERMNQ8TAM6 284 aa18.8■□□□□ 0.6
TOP3A-202ENST00000461127 BPIFB1Q8TDL5 484 aa18.8■□□□□ 0.6
TOP3A-202ENST00000461127 KIFAP3Q92845 792 aa18.8■□□□□ 0.6
TOP3A-202ENST00000461127 ZMAT2Q96NC0 199 aaKnown RBP18.8■□□□□ 0.6
TOP3A-202ENST00000461127 LRRC3Q9BY71 257 aa18.8■□□□□ 0.6
TOP3A-202ENST00000461127 CDT1Q9H211 546 aa18.8■□□□□ 0.6
TOP3A-202ENST00000461127 PCDHB8Q9UN66 801 aa18.8■□□□□ 0.6
TOP3A-202ENST00000461127 ASB3Q9Y575 518 aa18.8■□□□□ 0.6
TOP3A-202ENST00000461127 CITO14578 2027 aa18.79■□□□□ 0.6
TOP3A-202ENST00000461127 PKD1L2Q7Z442 2459 aa18.79■□□□□ 0.6
TOP3A-202ENST00000461127 SOBPA7XYQ1 873 aa18.79■□□□□ 0.6
TOP3A-202ENST00000461127 GIPC1O14908 333 aa18.79■□□□□ 0.6
TOP3A-202ENST00000461127 CAVIN2O95810 425 aa18.79■□□□□ 0.6
TOP3A-202ENST00000461127 CREB5Q02930 508 aa18.79■□□□□ 0.6
TOP3A-202ENST00000461127 TNK2Q07912 1038 aa18.79■□□□□ 0.6
TOP3A-202ENST00000461127 SH3PXD2AQ5TCZ1 1133 aa18.79■□□□□ 0.6
TOP3A-202ENST00000461127 LRRC3BQ96PB8 259 aa18.79■□□□□ 0.6
TOP3A-202ENST00000461127 PGLYRP2Q96PD5 576 aa18.79■□□□□ 0.6
TOP3A-202ENST00000461127 MTMR9Q96QG7 549 aa18.79■□□□□ 0.6
TOP3A-202ENST00000461127 POLR3CQ9BUI4 534 aaPredicted RBP18.79■□□□□ 0.6
TOP3A-202ENST00000461127 CNTN3Q9P232 1028 aa18.79■□□□□ 0.6
TOP3A-202ENST00000461127 NUP210Q8TEM1 1887 aaPredicted RBP18.79■□□□□ 0.6
TOP3A-202ENST00000461127 MED24O75448 989 aa18.78■□□□□ 0.6
TOP3A-202ENST00000461127 CEACAM1P13688 526 aa18.78■□□□□ 0.6
TOP3A-202ENST00000461127 SPINK2P20155 84 aa18.78■□□□□ 0.6
TOP3A-202ENST00000461127 MCM2P49736 904 aa18.78■□□□□ 0.6
TOP3A-202ENST00000461127 AMPD2Q01433 879 aa18.78■□□□□ 0.6
TOP3A-202ENST00000461127 DUSP4Q13115 394 aa18.78■□□□□ 0.6
TOP3A-202ENST00000461127 PKN3Q6P5Z2 889 aa18.78■□□□□ 0.6
TOP3A-202ENST00000461127 USP37Q86T82 979 aa18.78■□□□□ 0.6
TOP3A-202ENST00000461127 ITIH5Q86UX2 942 aa18.78■□□□□ 0.6
TOP3A-202ENST00000461127 C18orf25Q96B23 403 aaPredicted RBP18.78■□□□□ 0.6
TOP3A-202ENST00000461127 ACO2Q99798 780 aaKnown RBP18.78■□□□□ 0.6
TOP3A-202ENST00000461127 TCHPQ9BT92 498 aa18.78■□□□□ 0.6
TOP3A-202ENST00000461127 MRPL4Q9BYD3 311 aaKnown RBP18.78■□□□□ 0.6
TOP3A-202ENST00000461127 DNAJC25Q9H1X3 360 aa18.78■□□□□ 0.6
TOP3A-202ENST00000461127 KIF26AQ9ULI4 1882 aaPredicted RBP18.77■□□□□ 0.6
TOP3A-202ENST00000461127 PHLPP2Q6ZVD8 1323 aa18.77■□□□□ 0.6
TOP3A-202ENST00000461127 ATG2BQ96BY7 2078 aa18.77■□□□□ 0.6
TOP3A-202ENST00000461127 SRRM3A6NNA2 597 aaPredicted RBP18.77■□□□□ 0.6
TOP3A-202ENST00000461127 MCF2P10911 925 aa18.77■□□□□ 0.6
TOP3A-202ENST00000461127 GABRR2P28476 465 aa18.77■□□□□ 0.6
TOP3A-202ENST00000461127 SCRN1Q12765 414 aa18.77■□□□□ 0.6
TOP3A-202ENST00000461127 TMEM196Q5HYL7 178 aa18.77■□□□□ 0.6
TOP3A-202ENST00000461127 GAREM2Q75VX8 874 aa18.77■□□□□ 0.6
TOP3A-202ENST00000461127 ZCCHC14Q8WYQ9 949 aaKnown RBP18.77■□□□□ 0.6
TOP3A-202ENST00000461127 TNFRSF25Q93038 417 aa18.77■□□□□ 0.6
TOP3A-202ENST00000461127 PSMG2Q969U7 264 aa18.77■□□□□ 0.6
TOP3A-202ENST00000461127 GCNAQ96QF7 691 aa18.77■□□□□ 0.6
TOP3A-202ENST00000461127 MKNK1Q9BUB5 465 aa18.77■□□□□ 0.6
TOP3A-202ENST00000461127 DUSP15Q9H1R2 295 aaPredicted RBP18.77■□□□□ 0.6
TOP3A-202ENST00000461127 ORC3Q9UBD5 711 aaPredicted RBP18.77■□□□□ 0.6
TOP3A-202ENST00000461127 WASF3Q9UPY6 502 aa18.77■□□□□ 0.6
TOP3A-202ENST00000461127 EML5Q05BV3 1969 aa18.76■□□□□ 0.59
TOP3A-202ENST00000461127 BCLAF3A2AJT9 711 aaKnown RBP18.76■□□□□ 0.59
TOP3A-202ENST00000461127 OR6C75A6NL08 312 aa18.76■□□□□ 0.59
TOP3A-202ENST00000461127 CCDC169A6NNP5 214 aa18.76■□□□□ 0.59
TOP3A-202ENST00000461127 OAZ2O95190 189 aa18.76■□□□□ 0.59
TOP3A-202ENST00000461127 CSRP1P21291 193 aaKnown RBP18.76■□□□□ 0.59
TOP3A-202ENST00000461127 RPA1P27694 616 aa18.76■□□□□ 0.59
TOP3A-202ENST00000461127 WEE1P30291 646 aa18.76■□□□□ 0.59
TOP3A-202ENST00000461127 CACNB1Q02641 598 aaPredicted RBP18.76■□□□□ 0.59
TOP3A-202ENST00000461127 GPR17Q13304 367 aa18.76■□□□□ 0.59
TOP3A-202ENST00000461127 LRSAM1Q6UWE0 723 aa18.76■□□□□ 0.59
TOP3A-202ENST00000461127 DNAJB7Q7Z6W7 309 aaPredicted RBP18.76■□□□□ 0.59
TOP3A-202ENST00000461127 GATA6Q92908 595 aa18.76■□□□□ 0.59
TOP3A-202ENST00000461127 EXOC4Q96A65 974 aa18.76■□□□□ 0.59
TOP3A-202ENST00000461127 HHIPQ96QV1 700 aa18.76■□□□□ 0.59
TOP3A-202ENST00000461127 SCNM1Q9BWG6 230 aa18.76■□□□□ 0.59
TOP3A-202ENST00000461127 TMEM121BQ9BXQ6 578 aaPredicted RBP18.76■□□□□ 0.59
TOP3A-202ENST00000461127 TASP1Q9H6P5 420 aa18.76■□□□□ 0.59
TOP3A-202ENST00000461127 PTPRHQ9HD43 1115 aa18.76■□□□□ 0.59
TOP3A-202ENST00000461127 TMEM9BQ9NQ34 198 aa18.76■□□□□ 0.59
TOP3A-202ENST00000461127 LHX6Q9UPM6 363 aa18.76■□□□□ 0.59
TOP3A-202ENST00000461127 LNP1A1A4G5 178 aa18.75■□□□□ 0.59
TOP3A-202ENST00000461127 M0QZQ0 153 aa18.75■□□□□ 0.59
TOP3A-202ENST00000461127 TRDMT1O14717 391 aaKnown RBP18.75■□□□□ 0.59
TOP3A-202ENST00000461127 KHNYNO15037 678 aaKnown RBP18.75■□□□□ 0.59
TOP3A-202ENST00000461127 RNF40O75150 1001 aa18.75■□□□□ 0.59
TOP3A-202ENST00000461127 OR4Q2P0C623 313 aa18.75■□□□□ 0.59
TOP3A-202ENST00000461127 RABEP1Q15276 862 aa18.75■□□□□ 0.59
TOP3A-202ENST00000461127 FSTL4Q6MZW2 842 aa18.75■□□□□ 0.59
TOP3A-202ENST00000461127 TM6SF1Q9BZW5 370 aa18.75■□□□□ 0.59
TOP3A-202ENST00000461127 CRISPLD1Q9H336 500 aa18.75■□□□□ 0.59
TOP3A-202ENST00000461127 POLD4Q9HCU8 107 aa18.75■□□□□ 0.59
TOP3A-202ENST00000461127 GKN1Q9NS71 199 aa18.75■□□□□ 0.59
TOP3A-202ENST00000461127 PDRG1Q9NUG6 133 aa18.75■□□□□ 0.59
TOP3A-202ENST00000461127 ZMYM5Q9UJ78 669 aa18.75■□□□□ 0.59
TOP3A-202ENST00000461127 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.75■□□□□ 0.59
TOP3A-202ENST00000461127 VNN2O95498 520 aa18.74■□□□□ 0.59
TOP3A-202ENST00000461127 PRAMEF12O95522 483 aa18.74■□□□□ 0.59
TOP3A-202ENST00000461127 MUTP22033 750 aa18.74■□□□□ 0.59
TOP3A-202ENST00000461127 CDC25CP30307 473 aa18.74■□□□□ 0.59
TOP3A-202ENST00000461127 GBP1P32455 592 aa18.74■□□□□ 0.59
TOP3A-202ENST00000461127 RING1Q06587 406 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms