RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 ATG2AQ2TAZ0 1938 aa10.91□□□□□ -0.66
UPF2-204ENST00000460569 A0A1W2PQC6 194 aa10.9□□□□□ -0.66
UPF2-204ENST00000460569 M0QZQ0 153 aa10.9□□□□□ -0.66
UPF2-204ENST00000460569 SYN3O14994 580 aa10.9□□□□□ -0.66
UPF2-204ENST00000460569 SOD2P04179 222 aa10.9□□□□□ -0.66
UPF2-204ENST00000460569 URODP06132 367 aa10.9□□□□□ -0.66
UPF2-204ENST00000460569 TBXAS1P24557 533 aaPredicted RBP10.9□□□□□ -0.66
UPF2-204ENST00000460569 CA8P35219 290 aa10.9□□□□□ -0.66
UPF2-204ENST00000460569 ASPAP45381 313 aa10.9□□□□□ -0.66
UPF2-204ENST00000460569 PLCB3Q01970 1234 aa10.9□□□□□ -0.66
UPF2-204ENST00000460569 GPM6BQ13491 265 aa10.9□□□□□ -0.66
UPF2-204ENST00000460569 CUL2Q13617 745 aa10.9□□□□□ -0.66
UPF2-204ENST00000460569 WSCD1Q658N2 575 aa10.9□□□□□ -0.66
UPF2-204ENST00000460569 KIAA1841Q6NSI8 718 aa10.9□□□□□ -0.66
UPF2-204ENST00000460569 PHLDB3Q6NSJ2 640 aa10.9□□□□□ -0.66
UPF2-204ENST00000460569 GJB7Q6PEY0 223 aa10.9□□□□□ -0.66
UPF2-204ENST00000460569 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.9□□□□□ -0.66
UPF2-204ENST00000460569 RRAGAQ7L523 313 aa10.9□□□□□ -0.66
UPF2-204ENST00000460569 DDX53Q86TM3 631 aaKnown RBP10.9□□□□□ -0.66
UPF2-204ENST00000460569 METTL23Q86XA0 190 aa10.9□□□□□ -0.66
UPF2-204ENST00000460569 ADGRF2Q8IZF7 708 aa10.9□□□□□ -0.66
UPF2-204ENST00000460569 VPS52Q8N1B4 723 aa10.9□□□□□ -0.66
UPF2-204ENST00000460569 PDCL2Q8N4E4 241 aa10.9□□□□□ -0.66
UPF2-204ENST00000460569 TOP6BLQ8N6T0 577 aa10.9□□□□□ -0.66
UPF2-204ENST00000460569 NEK11Q8NG66 645 aa10.9□□□□□ -0.66
UPF2-204ENST00000460569 GDPD5Q8WTR4 605 aa10.9□□□□□ -0.66
UPF2-204ENST00000460569 ARID3AQ99856 593 aa10.9□□□□□ -0.66
UPF2-204ENST00000460569 BCO2Q9BYV7 579 aa10.9□□□□□ -0.66
UPF2-204ENST00000460569 GRPEL1Q9HAV7 217 aa10.9□□□□□ -0.66
UPF2-204ENST00000460569 SIX2Q9NPC8 291 aa10.9□□□□□ -0.66
UPF2-204ENST00000460569 FAM207AQ9NSI2 230 aaPredicted RBP10.9□□□□□ -0.66
UPF2-204ENST00000460569 APEX2Q9UBZ4 518 aa10.9□□□□□ -0.66
UPF2-204ENST00000460569 STK39Q9UEW8 545 aa10.9□□□□□ -0.66
UPF2-204ENST00000460569 PUF60Q9UHX1 559 aaKnown RBP10.9□□□□□ -0.66
UPF2-204ENST00000460569 DSEQ9UL01 958 aa10.9□□□□□ -0.66
UPF2-204ENST00000460569 TIMM13Q9Y5L4 95 aaPredicted RBP10.9□□□□□ -0.66
UPF2-204ENST00000460569 FSD2A1L4K1 749 aa10.89□□□□□ -0.67
UPF2-204ENST00000460569 H3BNC9 293 aa10.89□□□□□ -0.67
UPF2-204ENST00000460569 SOX1O00570 391 aaPredicted RBP10.89□□□□□ -0.67
UPF2-204ENST00000460569 EFEMP2O95967 443 aa10.89□□□□□ -0.67
UPF2-204ENST00000460569 WEE2P0C1S8 567 aa10.89□□□□□ -0.67
UPF2-204ENST00000460569 CD58P19256 250 aa10.89□□□□□ -0.67
UPF2-204ENST00000460569 TYMPP19971 482 aa10.89□□□□□ -0.67
UPF2-204ENST00000460569 FGFR3P22607 806 aa10.89□□□□□ -0.67
UPF2-204ENST00000460569 GLUD2P49448 558 aa10.89□□□□□ -0.67
UPF2-204ENST00000460569 ZNF75DP51815 510 aa10.89□□□□□ -0.67
UPF2-204ENST00000460569 CDH8P55286 799 aa10.89□□□□□ -0.67
UPF2-204ENST00000460569 YWHAEP62258 255 aaKnown RBP10.89□□□□□ -0.67
UPF2-204ENST00000460569 GCNT1Q02742 428 aa10.89□□□□□ -0.67
UPF2-204ENST00000460569 YWHAHQ04917 246 aaPredicted RBP10.89□□□□□ -0.67
UPF2-204ENST00000460569 RAPGEF1Q13905 1077 aa10.89□□□□□ -0.67
UPF2-204ENST00000460569 SOWAHAQ2M3V2 549 aa10.89□□□□□ -0.67
UPF2-204ENST00000460569 USP41Q3LFD5 358 aa10.89□□□□□ -0.67
UPF2-204ENST00000460569 RTP2Q5QGT7 225 aa10.89□□□□□ -0.67
UPF2-204ENST00000460569 VARS2Q5ST30 1063 aaKnown RBP10.89□□□□□ -0.67
UPF2-204ENST00000460569 KLHDC7AQ5VTJ3 777 aa10.89□□□□□ -0.67
UPF2-204ENST00000460569 OVOS1Q6IE37 1185 aa10.89□□□□□ -0.67
UPF2-204ENST00000460569 DPH6Q7L8W6 267 aa10.89□□□□□ -0.67
UPF2-204ENST00000460569 TAS1R1Q7RTX1 841 aa10.89□□□□□ -0.67
UPF2-204ENST00000460569 RNF168Q8IYW5 571 aaPredicted RBP10.89□□□□□ -0.67
UPF2-204ENST00000460569 TMEM86AQ8N2M4 240 aa10.89□□□□□ -0.67
UPF2-204ENST00000460569 POF1BQ8WVV4 589 aa10.89□□□□□ -0.67
UPF2-204ENST00000460569 RIN2Q8WYP3 895 aaPredicted RBP10.89□□□□□ -0.67
UPF2-204ENST00000460569 KAT5Q92993 513 aa10.89□□□□□ -0.67
UPF2-204ENST00000460569 FAXDC2Q96IV6 333 aa10.89□□□□□ -0.67
UPF2-204ENST00000460569 MRPL45Q9BRJ2 306 aaKnown RBP10.89□□□□□ -0.67
UPF2-204ENST00000460569 TTPALQ9BTX7 342 aa10.89□□□□□ -0.67
UPF2-204ENST00000460569 ZBP1Q9H171 429 aa10.89□□□□□ -0.67
UPF2-204ENST00000460569 SDCBP2Q9H190 292 aa10.89□□□□□ -0.67
UPF2-204ENST00000460569 GANQ9H2C0 597 aa10.89□□□□□ -0.67
UPF2-204ENST00000460569 ZNF576Q9H609 170 aa10.89□□□□□ -0.67
UPF2-204ENST00000460569 CYP3A43Q9HB55 503 aa10.89□□□□□ -0.67
UPF2-204ENST00000460569 UBE2TQ9NPD8 197 aaPredicted RBP10.89□□□□□ -0.67
UPF2-204ENST00000460569 PLCB1Q9NQ66 1216 aa10.89□□□□□ -0.67
UPF2-204ENST00000460569 ENTPD7Q9NQZ7 604 aa10.89□□□□□ -0.67
UPF2-204ENST00000460569 AJAP1Q9UKB5 411 aaPredicted RBP10.89□□□□□ -0.67
UPF2-204ENST00000460569 LZTS1Q9Y250 596 aa10.89□□□□□ -0.67
UPF2-204ENST00000460569 FHOD1Q9Y613 1164 aa10.89□□□□□ -0.67
UPF2-204ENST00000460569 EPOPA6NHQ4 379 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 C2CD2LO14523 706 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 EPHB6O15197 1021 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 GRM6O15303 877 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 TACC1O75410 805 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 NOL4O94818 638 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 CYP11A1P05108 521 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 UCHL3P15374 230 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 TRIM21P19474 475 aaKnown RBP10.88□□□□□ -0.67
UPF2-204ENST00000460569 RFX1P22670 979 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 WARSP23381 471 aaKnown RBP10.88□□□□□ -0.67
UPF2-204ENST00000460569 PBX1P40424 430 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 MFAP3P55082 362 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 POLR2FP61218 127 aaKnown RBP10.88□□□□□ -0.67
UPF2-204ENST00000460569 UBE3AQ05086 875 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 GSE1Q14687 1217 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 PSMD5Q16401 504 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 ARHGAP44Q17R89 818 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 CTXN3Q4LDR2 81 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 PLPP4Q5VZY2 271 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 IQCEQ6IPM2 695 aa10.88□□□□□ -0.67
UPF2-204ENST00000460569 ZNF280DQ6N043 979 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms