RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 SPATA17Q96L03 361 aa12.3□□□□□ -0.44
SMARCAD1-204ENST00000457823 XPO6Q96QU8 1125 aaKnown RBP12.3□□□□□ -0.44
SMARCAD1-204ENST00000457823 AGXT2Q9BYV1 514 aa12.3□□□□□ -0.44
SMARCAD1-204ENST00000457823 ISCUQ9H1K1 167 aa12.3□□□□□ -0.44
SMARCAD1-204ENST00000457823 PAK5Q9P286 719 aa12.3□□□□□ -0.44
SMARCAD1-204ENST00000457823 PSMC3IPQ9P2W1 217 aaPredicted RBP12.3□□□□□ -0.44
SMARCAD1-204ENST00000457823 CAPN6Q9Y6Q1 641 aa12.3□□□□□ -0.44
SMARCAD1-204ENST00000457823 CEP170BQ9Y4F5 1589 aaPredicted RBP12.3□□□□□ -0.44
SMARCAD1-204ENST00000457823 CFAP73A6NFT4 308 aa12.3□□□□□ -0.44
SMARCAD1-204ENST00000457823 EEF2KO00418 725 aaKnown RBP12.3□□□□□ -0.44
SMARCAD1-204ENST00000457823 OGTO15294 1046 aa12.3□□□□□ -0.44
SMARCAD1-204ENST00000457823 NPTX2P47972 431 aa12.3□□□□□ -0.44
SMARCAD1-204ENST00000457823 STX3Q13277 289 aa12.3□□□□□ -0.44
SMARCAD1-204ENST00000457823 GLB1LQ6UWU2 654 aa12.3□□□□□ -0.44
SMARCAD1-204ENST00000457823 SLC13A5Q86YT5 568 aaPredicted RBP12.3□□□□□ -0.44
SMARCAD1-204ENST00000457823 ZNF473Q8WTR7 871 aaKnown RBP12.3□□□□□ -0.44
SMARCAD1-204ENST00000457823 ANKRD7Q92527 254 aa12.3□□□□□ -0.44
SMARCAD1-204ENST00000457823 SGSM3Q96HU1 749 aa12.3□□□□□ -0.44
SMARCAD1-204ENST00000457823 ZNF512Q96ME7 567 aaPredicted RBP12.3□□□□□ -0.44
SMARCAD1-204ENST00000457823 DNAJC7Q99615 494 aa12.3□□□□□ -0.44
SMARCAD1-204ENST00000457823 FAM167BQ9BTA0 163 aa12.3□□□□□ -0.44
SMARCAD1-204ENST00000457823 ZC3H4Q9UPT8 1303 aaKnown RBP12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 TMEM120BA0PK00 339 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 EIF4E1BA6NMX2 242 aaKnown RBP12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 EIF3HO15372 352 aaKnown RBP eCLIP12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 SGPL1O95470 568 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 PGM1P36871 562 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 RAD23BP54727 409 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 ALDH18A1P54886 795 aaKnown RBP12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 CUL2Q13617 745 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 USP10Q14694 798 aaKnown RBP12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 GLRA4Q5JXX5 417 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 THEMIS2Q5TEJ8 643 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 AP1ARQ63HQ0 302 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 ACAD10Q6JQN1 1059 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 SLC30A10Q6XR72 485 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 TTC30AQ86WT1 665 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 TSSK1BQ9BXA7 367 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 FOXP3Q9BZS1 431 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 RIOX1Q9H6W3 641 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 NPHS2Q9NP85 383 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 PRDM5Q9NQX1 630 aaPredicted RBP12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 WARS2Q9UGM6 360 aaKnown RBP12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 KCNH4Q9UQ05 1017 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 TMX2Q9Y320 296 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 AKAP3O75969 853 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 KRT4P19013 534 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 GPD1P21695 349 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 LSP1P33241 339 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 COILP38432 576 aaPredicted RBP12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 IRAK1P51617 712 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 CLCN3P51790 818 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 AP2B1P63010 937 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 CUL3Q13618 768 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 PDCD2Q16342 344 aaPredicted RBP12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 DGKDQ16760 1214 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 FAM117BQ6P1L5 589 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 ATPAF2Q8N5M1 289 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 FAM71DQ8N9W8 422 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 SLC16A10Q8TF71 515 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 PTPRN2Q92932 1015 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 MRPL40Q9NQ50 206 aaKnown RBP12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 NFIBO00712 420 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 NPTXRO95502 500 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 AARSP49588 968 aaKnown RBP eCLIP12.29□□□□□ -0.444e-6■■■■■ 30.6
SMARCAD1-204ENST00000457823 EZH2Q15910 746 aaKnown RBP12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 RBM43Q6ZSC3 357 aaKnown RBP12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 DEFB132Q7Z7B7 95 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 SCFD1Q8WVM8 642 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 METTL5Q9NRN9 209 aaKnown RBP12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 NDE1Q9NXR1 346 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 KLK14Q9P0G3 267 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 REREQ9P2R6 1566 aa12.29□□□□□ -0.44
SMARCAD1-204ENST00000457823 POLR1AO95602 1720 aaPredicted RBP12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 CASP7P55210 303 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 BACE1P56817 501 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 UGP2Q16851 508 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 ANO4Q32M45 955 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 BOLA3Q53S33 107 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 C3orf67Q6ZVT6 689 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 PPHLN1Q8NEY8 458 aaKnown RBP12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 POP1Q99575 1024 aaKnown RBP12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 PACSIN1Q9BY11 444 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 PCMTD2Q9NV79 361 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 SLC38A7Q9NVC3 462 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 USP15Q9Y4E8 981 aaPredicted RBP12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 ZNF197O14709 1029 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 SETSIPP0DME0 302 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 ACADSBP45954 432 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 PTK7Q13308 1070 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 PCSK7Q16549 785 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 MDH1BQ5I0G3 518 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 PARP9Q8IXQ6 854 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 GMCL1Q96IK5 515 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 ENO1P06733 434 aaKnown RBP12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 CETPP11597 493 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 IFNA8P32881 189 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 ORC1Q13415 861 aa12.28□□□□□ -0.44
SMARCAD1-204ENST00000457823 DIP2AQ14689 1571 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms