RNA–Protein interactions for RNA: ENST00000456542.5

SP140-207, Transcript of SP140 nuclear body protein, humanhuman

TSL 4

Gene SP140, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-207ENST00000456542 CSGALNACT2Q8N6G5 542 aa9.16□□□□□ -0.94
SP140-207ENST00000456542 KREMEN2Q8NCW0 462 aa9.16□□□□□ -0.94
SP140-207ENST00000456542 ZNF461Q8TAF7 563 aa9.16□□□□□ -0.94
SP140-207ENST00000456542 SPATA18Q8TC71 538 aa9.16□□□□□ -0.94
SP140-207ENST00000456542 PLEKHO2Q8TD55 490 aa9.16□□□□□ -0.94
SP140-207ENST00000456542 ADAMTS19Q8TE59 1207 aa9.16□□□□□ -0.94
SP140-207ENST00000456542 CCDC127Q96BQ5 260 aa9.16□□□□□ -0.94
SP140-207ENST00000456542 DHTKD1Q96HY7 919 aaPredicted RBP9.16□□□□□ -0.94
SP140-207ENST00000456542 NECTIN4Q96NY8 510 aa9.16□□□□□ -0.94
SP140-207ENST00000456542 TSG101Q99816 390 aa9.16□□□□□ -0.94
SP140-207ENST00000456542 CLSTN2Q9H4D0 955 aa9.16□□□□□ -0.94
SP140-207ENST00000456542 ZDHHC7Q9NXF8 308 aa9.16□□□□□ -0.94
SP140-207ENST00000456542 GDAP2Q9NXN4 497 aa9.16□□□□□ -0.94
SP140-207ENST00000456542 KIAA1468Q9P260 1216 aa9.16□□□□□ -0.94
SP140-207ENST00000456542 FBXL5Q9UKA1 691 aa9.16□□□□□ -0.94
SP140-207ENST00000456542 R3HCC1Q9Y3T6 440 aaKnown RBP9.16□□□□□ -0.94
SP140-207ENST00000456542 TTC28Q96AY4 2481 aa9.16□□□□□ -0.94
SP140-207ENST00000456542 OR6C75A6NL08 312 aa9.15□□□□□ -0.94
SP140-207ENST00000456542 SPDYE4A6NLX3 237 aa9.15□□□□□ -0.94
SP140-207ENST00000456542 LRRIQ3A6PVS8 624 aaPredicted RBP9.15□□□□□ -0.94
SP140-207ENST00000456542 DLL1O00548 723 aa9.15□□□□□ -0.94
SP140-207ENST00000456542 CYB561D2O14569 222 aa9.15□□□□□ -0.94
SP140-207ENST00000456542 IKBKBO14920 756 aa9.15□□□□□ -0.94
SP140-207ENST00000456542 CETN3O15182 167 aa9.15□□□□□ -0.94
SP140-207ENST00000456542 ZMYND10O75800 440 aa9.15□□□□□ -0.94
SP140-207ENST00000456542 AKAP3O75969 853 aa9.15□□□□□ -0.94
SP140-207ENST00000456542 ABLIM3O94929 683 aa9.15□□□□□ -0.94
SP140-207ENST00000456542 STAU1O95793 577 aaKnown RBP9.15□□□□□ -0.94
SP140-207ENST00000456542 POU2F2P09086 479 aa9.15□□□□□ -0.94
SP140-207ENST00000456542 HNRNPA1P09651 372 aaKnown RBP eCLIP9.15□□□□□ -0.94
SP140-207ENST00000456542 ATF2P15336 505 aa9.15□□□□□ -0.94
SP140-207ENST00000456542 BMP6P22004 513 aa9.15□□□□□ -0.94
SP140-207ENST00000456542 CCNE1P24864 410 aa9.15□□□□□ -0.94
SP140-207ENST00000456542 HOXA9P31269 272 aa9.15□□□□□ -0.94
SP140-207ENST00000456542 MTHFRP42898 656 aa9.15□□□□□ -0.94
SP140-207ENST00000456542 FKBP3Q00688 224 aaKnown RBP9.15□□□□□ -0.94
SP140-207ENST00000456542 CBX2Q14781 532 aaPredicted RBP9.15□□□□□ -0.94
SP140-207ENST00000456542 CAMK4Q16566 473 aa9.15□□□□□ -0.94
SP140-207ENST00000456542 UVSSAQ2YD98 709 aa9.15□□□□□ -0.94
SP140-207ENST00000456542 RARS2Q5T160 578 aaKnown RBP9.15□□□□□ -0.94
SP140-207ENST00000456542 LIN9Q5TKA1 542 aa9.15□□□□□ -0.94
SP140-207ENST00000456542 OVOS1Q6IE37 1185 aa9.15□□□□□ -0.94
SP140-207ENST00000456542 CCDC149Q6ZUS6 474 aa9.15□□□□□ -0.94
SP140-207ENST00000456542 DPH6Q7L8W6 267 aa9.15□□□□□ -0.94
SP140-207ENST00000456542 GPR149Q86SP6 731 aa9.15□□□□□ -0.94
SP140-207ENST00000456542 ZC3H3Q8IXZ2 948 aaKnown RBP9.15□□□□□ -0.94
SP140-207ENST00000456542 FAM186BQ8IYM0 893 aa9.15□□□□□ -0.94
SP140-207ENST00000456542 TMEM86AQ8N2M4 240 aa9.15□□□□□ -0.94
SP140-207ENST00000456542 ZNF516Q92618 1163 aa9.15□□□□□ -0.94
SP140-207ENST00000456542 FAM84AQ96KN4 292 aa9.15□□□□□ -0.94
SP140-207ENST00000456542 RIPOR3Q96MK2 946 aa9.15□□□□□ -0.94
SP140-207ENST00000456542 POP1Q99575 1024 aaKnown RBP9.15□□□□□ -0.94
SP140-207ENST00000456542 MAFFQ9ULX9 164 aa9.15□□□□□ -0.94
SP140-207ENST00000456542 TIMM13Q9Y5L4 95 aaPredicted RBP9.15□□□□□ -0.94
SP140-207ENST00000456542 DOCK6Q96HP0 2047 aa9.15□□□□□ -0.94
SP140-207ENST00000456542 DOCK8Q8NF50 2099 aa9.14□□□□□ -0.95
SP140-207ENST00000456542 BICDL2A1A5D9 508 aa9.14□□□□□ -0.95
SP140-207ENST00000456542 WDR27A2RRH5 827 aa9.14□□□□□ -0.95
SP140-207ENST00000456542 PPP1R3GB7ZBB8 358 aa9.14□□□□□ -0.95
SP140-207ENST00000456542 TULP1O00294 542 aaPredicted RBP9.14□□□□□ -0.95
SP140-207ENST00000456542 BIN1O00499 593 aa9.14□□□□□ -0.95
SP140-207ENST00000456542 SLC16A3O15427 465 aaKnown RBP9.14□□□□□ -0.95
SP140-207ENST00000456542 HUS1O60921 280 aa9.14□□□□□ -0.95
SP140-207ENST00000456542 C4BPAP04003 597 aaKnown RBP9.14□□□□□ -0.95
SP140-207ENST00000456542 C8AP07357 584 aa9.14□□□□□ -0.95
SP140-207ENST00000456542 SPATA31D3P0C874 917 aa9.14□□□□□ -0.95
SP140-207ENST00000456542 EPB41P11171 864 aaKnown RBP9.14□□□□□ -0.95
SP140-207ENST00000456542 KRT13P13646 458 aa9.14□□□□□ -0.95
SP140-207ENST00000456542 CPB1P15086 417 aa9.14□□□□□ -0.95
SP140-207ENST00000456542 CD44P16070 742 aaKnown RBP9.14□□□□□ -0.95
SP140-207ENST00000456542 ATICP31939 592 aa9.14□□□□□ -0.95
SP140-207ENST00000456542 VAMP7P51809 220 aa9.14□□□□□ -0.95
SP140-207ENST00000456542 PMS1P54277 932 aaKnown RBP9.14□□□□□ -0.95
SP140-207ENST00000456542 ZP2Q05996 745 aa9.14□□□□□ -0.95
SP140-207ENST00000456542 BFSP1Q12934 665 aa9.14□□□□□ -0.95
SP140-207ENST00000456542 GPR17Q13304 367 aa9.14□□□□□ -0.95
SP140-207ENST00000456542 ZACNQ401N2 412 aa9.14□□□□□ -0.95
SP140-207ENST00000456542 ATAT1Q5SQI0 421 aa9.14□□□□□ -0.95
SP140-207ENST00000456542 WSCD1Q658N2 575 aa9.14□□□□□ -0.95
SP140-207ENST00000456542 ANKRD40Q6AI12 368 aa9.14□□□□□ -0.95
SP140-207ENST00000456542 ISM2Q6H9L7 571 aa9.14□□□□□ -0.95
SP140-207ENST00000456542 TMC5Q6UXY8 1006 aa9.14□□□□□ -0.95
SP140-207ENST00000456542 SPATA31D4Q6ZUB0 917 aa9.14□□□□□ -0.95
SP140-207ENST00000456542 LIMS2Q7Z4I7 341 aa9.14□□□□□ -0.95
SP140-207ENST00000456542 METTL23Q86XA0 190 aa9.14□□□□□ -0.95
SP140-207ENST00000456542 ADHFE1Q8IWW8 467 aa9.14□□□□□ -0.95
SP140-207ENST00000456542 TCEAL8Q8IYN2 117 aa9.14□□□□□ -0.95
SP140-207ENST00000456542 THEM5Q8N1Q8 247 aa9.14□□□□□ -0.95
SP140-207ENST00000456542 TOP6BLQ8N6T0 577 aa9.14□□□□□ -0.95
SP140-207ENST00000456542 C12orf76Q8N812 135 aaPredicted RBP9.14□□□□□ -0.95
SP140-207ENST00000456542 HPDLQ96IR7 371 aa9.14□□□□□ -0.95
SP140-207ENST00000456542 UHRF1Q96T88 793 aaPredicted RBP9.14□□□□□ -0.95
SP140-207ENST00000456542 PHF7Q9BWX1 381 aaPredicted RBP9.14□□□□□ -0.95
SP140-207ENST00000456542 COL25A1Q9BXS0 654 aaPredicted RBP9.14□□□□□ -0.95
SP140-207ENST00000456542 PRKD2Q9BZL6 878 aa9.14□□□□□ -0.95
SP140-207ENST00000456542 NUP62CLQ9H1M0 184 aa9.14□□□□□ -0.95
SP140-207ENST00000456542 VRTNQ9H8Y1 702 aa9.14□□□□□ -0.95
SP140-207ENST00000456542 AFF4Q9UHB7 1163 aaKnown RBP9.14□□□□□ -0.95
SP140-207ENST00000456542 L1RE1Q9UN81 338 aa9.14□□□□□ -0.95
SP140-207ENST00000456542 SNX9Q9Y5X1 595 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms