RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 ELOA2Q8IYF1 753 aaPredicted RBP12.92□□□□□ -0.34
NEDD4L-208ENST00000456173 USP33Q8TEY7 942 aa12.92□□□□□ -0.34
NEDD4L-208ENST00000456173 MTERF3Q96E29 417 aa12.92□□□□□ -0.34
NEDD4L-208ENST00000456173 OSBPL7Q9BZF2 842 aa12.92□□□□□ -0.34
NEDD4L-208ENST00000456173 FOXP3Q9BZS1 431 aa12.92□□□□□ -0.34
NEDD4L-208ENST00000456173 RAB6BQ9NRW1 208 aa12.92□□□□□ -0.34
NEDD4L-208ENST00000456173 STK39Q9UEW8 545 aa12.92□□□□□ -0.34
NEDD4L-208ENST00000456173 HBS1LQ9Y450 684 aaKnown RBP12.92□□□□□ -0.34
NEDD4L-208ENST00000456173 ATXN2Q99700 1313 aaKnown RBP12.92□□□□□ -0.34
NEDD4L-208ENST00000456173 MYMKA6NI61 221 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 SPDYE5A6NIY4 337 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 PPARGP37231 505 aaPredicted RBP12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 STAT3P40763 770 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 BCAR1P56945 870 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 CPA5Q8WXQ8 436 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 REXO4Q9GZR2 422 aaKnown RBP12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 RUBCNLQ9H714 662 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 DDX56Q9NY93 547 aaKnown RBP12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 ZNF23P17027 643 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 ST3GAL1Q11201 340 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 LAMC2Q13753 1193 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 CNGA2Q16280 664 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 C7orf25Q9BPX7 421 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 PHACTR1Q9C0D0 580 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 SCN3BQ9NY72 215 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 CNOT7Q9UIV1 285 aaKnown RBP12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 CDYLQ9Y232 598 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 PLXNC1O60486 1568 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 TRIM43BA6NCK2 446 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 MED7O43513 233 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 SHOX2O60902 331 aaPredicted RBP12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 IGKV5-2P06315 115 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 RALAP11233 206 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 FNTAP49354 379 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 RAB27AP51159 221 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 ANTXR2P58335 489 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 MTFR1Q15390 333 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 CCDC149Q6ZUS6 474 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 ARHGEF1Q92888 912 aaKnown RBP12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 CENPTQ96BT3 561 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 ERLEC1Q96DZ1 483 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 PLEKHG4BQ96PX9 1271 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 OSGEPQ9NPF4 335 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 IPPQ9Y573 584 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 ZFYVE16Q7Z3T8 1539 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 PRR23D1E9PI22 279 aaPredicted RBP12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 ABLIM1O14639 778 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 PFDN6O15212 129 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 PRR23D2P0DMB1 279 aaPredicted RBP12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 ANXA13P27216 316 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 BTDP43251 543 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 ARPC4P59998 168 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 NSUN2Q08J23 767 aaKnown RBP eCLIP12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 RIPK1Q13546 671 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 GSTA3Q16772 222 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 TTC39BQ5VTQ0 682 aaPredicted RBP12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 MTHFD1LQ6UB35 978 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 SYN2Q92777 582 aaPredicted RBP12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 OXNAD1Q96HP4 312 aaPredicted RBP12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 ECSITQ9BQ95 431 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 CDY2AQ9Y6F7 541 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 CDY1Q9Y6F8 540 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 MYO5CQ9NQX4 1742 aa12.91□□□□□ -0.34
NEDD4L-208ENST00000456173 E9PBE3 544 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 KLHL41O60662 606 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 SLC1A1P43005 524 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 NAA20P61599 178 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 MECOMQ03112 1051 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 FRA10AC1Q70Z53 315 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 ZBTB8OSQ8IWT0 167 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 ZSWIM1Q9BR11 485 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 TRNAU1APQ9NX07 287 aaKnown RBP12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 UVRAGQ9P2Y5 699 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 CTNNAL1Q9UBT7 734 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 GRID1Q9ULK0 1009 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 SOX13Q9UN79 622 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 DNAJC16Q9Y2G8 782 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 SPDYE2BA6NHP3 402 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 SPDYE6P0CI01 402 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 ALAS1P13196 640 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 OSTNP61366 133 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 CDK17Q00537 523 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 KRR1Q13601 381 aaKnown RBP12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 TMEM110Q86TL2 294 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 NLRP10Q86W26 655 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 HPS1Q92902 700 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 DGCR14Q96DF8 476 aaKnown RBP12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 SLC10A4Q96EP9 437 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 HEXIM2Q96MH2 286 aaKnown RBP12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 PHF20Q9BVI0 1012 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 SAR1AQ9NR31 198 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 APEX2Q9UBZ4 518 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 KLHL33A6NCF5 533 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 MYO1GB0I1T2 1018 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 RASSF9O75901 435 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 CALB1P05937 261 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 OR6Y1Q8NGX8 325 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 EPAS1Q99814 870 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 LRMDAQ9H2I8 198 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 ATP10DQ9P241 1426 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms