RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 RASGRP4Q8TDF6 673 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 KLHL6Q8WZ60 621 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 ALG3Q92685 438 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 TSPAN17Q96FV3 270 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 SPATA32Q96LK8 384 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 C11orf84Q9BUA3 381 aaPredicted RBP4.32□□□□□ -1.72
RBM39-220ENST00000455343 MAF1Q9H063 256 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 TLR9Q9NR96 1032 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 FBLN5Q9UBX5 448 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 CGGBP1Q9UFW8 167 aaPredicted RBP4.32□□□□□ -1.72
RBM39-220ENST00000455343 SUSD2Q9UGT4 822 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 CD207Q9UJ71 328 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 DBR1Q9UK59 544 aaKnown RBP4.32□□□□□ -1.72
RBM39-220ENST00000455343 PNMA2Q9UL42 364 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 EFR3BQ9Y2G0 817 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 WDR87Q6ZQQ6 2873 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 GREB1LQ9C091 1923 aaPredicted RBP4.32□□□□□ -1.72
RBM39-220ENST00000455343 COL11A1P12107 1806 aaPredicted RBP4.32□□□□□ -1.72
RBM39-220ENST00000455343 GVINP1Q7Z2Y8 2422 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 EPG5Q9HCE0 2579 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 MYO5AQ9Y4I1 1855 aaKnown RBP4.31□□□□□ -1.72
RBM39-220ENST00000455343 WDR19Q8NEZ3 1342 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 PTPDC1A2A3K4 754 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 SCAMP3O14828 347 aaKnown RBP4.31□□□□□ -1.72
RBM39-220ENST00000455343 GPAA1O43292 621 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 CAND2O75155 1236 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 PPFIA4O75335 1185 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 GLP2RO95838 553 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 GH1P01241 217 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 MMP1P03956 469 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 FGRP09769 529 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 TSPY3P0CV98 308 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 TSPY8P0CW00 308 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 NCAM1P13591 858 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 ATF7P17544 494 aaPredicted RBP4.31□□□□□ -1.72
RBM39-220ENST00000455343 GNAT2P19087 354 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 CALML3P27482 149 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 NFKB2Q00653 900 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 SLC7A5Q01650 507 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 IKQ13123 557 aaPredicted RBP4.31□□□□□ -1.72
RBM39-220ENST00000455343 DGKDQ16760 1214 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 KIAA0753Q2KHM9 967 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 DPY19L1Q2PZI1 675 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 HEATR6Q6AI08 1181 aaKnown RBP4.31□□□□□ -1.72
RBM39-220ENST00000455343 RNF207Q6ZRF8 634 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 CABP7Q86V35 215 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 IFNL3Q8IZI9 196 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 EFHBQ8N7U6 833 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 C7orf31Q8N865 590 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 KBTBD3Q8NAB2 608 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 OR6P1Q8NGX9 317 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 PPTC7Q8NI37 304 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 SUSD6Q92537 303 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 SEPT8Q92599 483 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 APPBP2Q92624 585 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 P2RX5Q93086 422 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 ZNF689Q96CS4 500 aaPredicted RBP4.31□□□□□ -1.72
RBM39-220ENST00000455343 GPRASP2Q96D09 838 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 IL17RAQ96F46 866 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 RIPOR3Q96MK2 946 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 YME1L1Q96TA2 773 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 MPHOSPH6Q99547 160 aaKnown RBP4.31□□□□□ -1.72
RBM39-220ENST00000455343 KATNAL1Q9BW62 490 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 PHF7Q9BWX1 381 aaPredicted RBP4.31□□□□□ -1.72
RBM39-220ENST00000455343 RXFP1Q9HBX9 757 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 PCDHB10Q9UN67 800 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 STX8Q9UNK0 236 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 FAN1Q9Y2M0 1017 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.31□□□□□ -1.72
RBM39-220ENST00000455343 RWDD3Q9Y3V2 267 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 BACE2Q9Y5Z0 518 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 CFAP47Q6ZTR5 3102 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 COL4A4P53420 1690 aaPredicted RBP4.31□□□□□ -1.72
RBM39-220ENST00000455343 FRYLO94915 3013 aa4.31□□□□□ -1.72
RBM39-220ENST00000455343 NAV1Q8NEY1 1877 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 NCOR2Q9Y618 2525 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 SCN5AQ14524 2016 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 A0A1B0GTL3 188 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 SH3D21A4FU49 640 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 B4DLN1 442 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 FOXP2O15409 715 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 NMT2O60551 498 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 RAB11FIP3O75154 756 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 PPM1BO75688 479 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 PDGFBP01127 241 aaPredicted RBP4.3□□□□□ -1.72
RBM39-220ENST00000455343 SNHG28P0DPA3 235 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 DNAJB1P25685 340 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 PMLP29590 882 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 CTNNB1P35222 781 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 SLC16A2P36021 539 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 THPOP40225 353 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 SEPHS1P49903 392 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 MRPL12P52815 198 aaKnown RBP4.3□□□□□ -1.72
RBM39-220ENST00000455343 ADAM17P78536 824 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 AMPD2Q01433 879 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 PPARAQ07869 468 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 KCNC3Q14003 757 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 PTPN21Q16825 1174 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 HSDL1Q3SXM5 330 aa4.3□□□□□ -1.72
RBM39-220ENST00000455343 NAALADL2Q58DX5 795 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms