RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 BEST2Q8NFU1 509 aa8.74□□□□□ -1.01
NIF3L1-209ENST00000454952 ZSCAN18Q8TBC5 510 aaPredicted RBP8.74□□□□□ -1.01
NIF3L1-209ENST00000454952 FAM200AQ8TCP9 573 aa8.74□□□□□ -1.01
NIF3L1-209ENST00000454952 LMAN1LQ9HAT1 526 aa8.74□□□□□ -1.01
NIF3L1-209ENST00000454952 ANKFY1Q9P2R3 1169 aa8.74□□□□□ -1.01
NIF3L1-209ENST00000454952 HSFX1Q9UBD0 423 aa8.74□□□□□ -1.01
NIF3L1-209ENST00000454952 ZMYM5Q9UJ78 669 aa8.74□□□□□ -1.01
NIF3L1-209ENST00000454952 UBQLN1Q9UMX0 589 aaKnown RBP8.74□□□□□ -1.01
NIF3L1-209ENST00000454952 NDRG2Q9UN36 371 aaKnown RBP8.74□□□□□ -1.01
NIF3L1-209ENST00000454952 PIAS3Q9Y6X2 628 aa8.74□□□□□ -1.01
NIF3L1-209ENST00000454952 DMDP11532 3685 aa8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 NUP210Q8TEM1 1887 aaPredicted RBP8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 COL4A3Q01955 1670 aa8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 NCOR2Q9Y618 2525 aa8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 M0QZQ0 153 aa8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 ABLIM1O14639 778 aa8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 SLC16A4O15374 487 aa8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 SLC26A4O43511 780 aa8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 PAPSS2O95340 614 aaPredicted RBP8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 RETP07949 1114 aa8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 HARSP12081 509 aaKnown RBP8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 IGFBP6P24592 240 aaPredicted RBP8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 KPNA1P52294 538 aaPredicted RBP8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 ATXN1P54253 815 aaKnown RBP8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 PPP2R3AQ06190 1150 aa8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 MCL1Q07820 350 aa8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 MYBPC2Q14324 1141 aa8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 PTPAQ15257 358 aa8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 SLC10A6Q3KNW5 377 aa8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 ARHGAP15Q53QZ3 475 aa8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 DGKKQ5KSL6 1271 aa8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 ARMCX5Q6P1M9 558 aa8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 TSSK4Q6SA08 328 aa8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 ITIH5Q86UX2 942 aa8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 CD302Q8IX05 232 aa8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 DAW1Q8N136 415 aa8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 ZNF687Q8N1G0 1237 aa8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 SYNPOQ8N3V7 929 aa8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 NETO1Q8TDF5 533 aa8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 DDX1Q92499 740 aaKnown RBP8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 KCNN1Q92952 543 aa8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 C18orf25Q96B23 403 aaPredicted RBP8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 TCEAL4Q96EI5 215 aa8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 BICD1Q96G01 975 aa8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 CDK5RAP3Q96JB5 506 aa8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 RUSC1Q9BVN2 902 aa8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 OBP2AQ9NY56 170 aa8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 CEP72Q9P209 647 aa8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 LARSQ9P2J5 1176 aaKnown RBP8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 YIPF1Q9Y548 306 aa8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 GTF3C3Q9Y5Q9 886 aa8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 COL4A2P08572 1712 aa8.73□□□□□ -1.01
NIF3L1-209ENST00000454952 SPAG17Q6Q759 2223 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 HEPACAM2A8MVW5 462 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 E9PMD0 336 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 MAPTP10636 758 aaKnown RBP8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 CHRNB1P11230 501 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 ODC1P11926 461 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 TDGF1P13385 188 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 TYMPP19971 482 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 FECHP22830 423 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 CCNE1P24864 410 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 HOXA6P31267 233 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 CCR2P41597 374 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 AARSP49588 968 aaKnown RBP eCLIP8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 LIG4P49917 911 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 FCHO2Q0JRZ9 810 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 ST3GAL1Q11201 340 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 MAPK7Q13164 816 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 GPR17Q13304 367 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 SIM2Q14190 667 aaPredicted RBP8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 VEPH1Q14D04 833 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 TEAD2Q15562 447 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 ARHGAP29Q52LW3 1261 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 RILPL1Q5EBL4 403 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 HYIQ5T013 277 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 DSTYKQ6XUX3 929 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 RNF19BQ6ZMZ0 732 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 PRR23BQ6ZRT6 265 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 TAS1R3Q7RTX0 852 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 LONP2Q86WA8 852 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 RALGPS2Q86X27 583 aaPredicted RBP8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 SYT2Q8N9I0 419 aaPredicted RBP8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 TMEM161BQ8NDZ6 487 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 EXOC4Q96A65 974 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 ZSWIM3Q96MP5 696 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 GCNAQ96QF7 691 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 EPAS1Q99814 870 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 POLD4Q9HCU8 107 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 THG1LQ9NWX6 298 aaKnown RBP8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 DSEQ9UL01 958 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 PCDHGA10Q9Y5H3 936 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 SPTBN2O15020 2390 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 DMXL1Q9Y485 3027 aa8.72□□□□□ -1.01
NIF3L1-209ENST00000454952 TTC26A0AVF1 554 aa8.71□□□□□ -1.02
NIF3L1-209ENST00000454952 SHISA7A6NL88 538 aa8.71□□□□□ -1.02
NIF3L1-209ENST00000454952 ARNTLO00327 626 aa8.71□□□□□ -1.02
NIF3L1-209ENST00000454952 MOSPD3O75425 235 aa8.71□□□□□ -1.02
NIF3L1-209ENST00000454952 CXCL8P10145 99 aa8.71□□□□□ -1.02
NIF3L1-209ENST00000454952 HOXB3P14651 431 aaPredicted RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms