RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 POLR2FP61218 127 aaKnown RBP12.05□□□□□ -0.48
TRAF4-206ENST00000454852 TNNC1P63316 161 aa12.05□□□□□ -0.48
TRAF4-206ENST00000454852 ZBED6P86452 979 aa12.05□□□□□ -0.48
TRAF4-206ENST00000454852 PLCB3Q01970 1234 aa12.05□□□□□ -0.48
TRAF4-206ENST00000454852 APBA1Q02410 837 aa12.05□□□□□ -0.48
TRAF4-206ENST00000454852 PTPN21Q16825 1174 aa12.05□□□□□ -0.48
TRAF4-206ENST00000454852 SOWAHAQ2M3V2 549 aa12.05□□□□□ -0.48
TRAF4-206ENST00000454852 UNC93AQ86WB7 457 aa12.05□□□□□ -0.48
TRAF4-206ENST00000454852 FAM71AQ8IYT1 594 aa12.05□□□□□ -0.48
TRAF4-206ENST00000454852 COLGALT1Q8NBJ5 622 aa12.05□□□□□ -0.48
TRAF4-206ENST00000454852 SAMD11Q96NU1 681 aa12.05□□□□□ -0.48
TRAF4-206ENST00000454852 DNAJC7Q99615 494 aa12.05□□□□□ -0.48
TRAF4-206ENST00000454852 UBE2TQ9NPD8 197 aaPredicted RBP12.05□□□□□ -0.48
TRAF4-206ENST00000454852 CACNG4Q9UBN1 327 aa12.05□□□□□ -0.48
TRAF4-206ENST00000454852 AJAP1Q9UKB5 411 aaPredicted RBP12.05□□□□□ -0.48
TRAF4-206ENST00000454852 PCDHB8Q9UN66 801 aa12.05□□□□□ -0.48
TRAF4-206ENST00000454852 LUC7L2Q9Y383 392 aaKnown RBP12.05□□□□□ -0.48
TRAF4-206ENST00000454852 SF3B1O75533 1304 aaKnown RBP eCLIP12.05□□□□□ -0.48
TRAF4-206ENST00000454852 TNRC18O15417 2968 aaPredicted RBP12.05□□□□□ -0.48
TRAF4-206ENST00000454852 LCHNA4D1U4 455 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 LINC01553A4QN01 128 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 F8VZ95 297 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 RNF225M0QZC1 329 aaPredicted RBP12.04□□□□□ -0.48
TRAF4-206ENST00000454852 TULP1O00294 542 aaPredicted RBP12.04□□□□□ -0.48
TRAF4-206ENST00000454852 CYB561D2O14569 222 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 HUS1O60921 280 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 MFAP3LO75121 409 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 CILPO75339 1184 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 TADA2AO75478 443 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 OAZ2O95190 189 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 RB1P06400 928 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 ODC1P11926 461 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 FGFR3P22607 806 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 CASP14P31944 242 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 BMPR1AP36894 532 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 FXR1P51114 621 aaKnown RBP eCLIP12.04□□□□□ -0.48
TRAF4-206ENST00000454852 LRMPQ12912 555 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 MRPL58Q14197 206 aaKnown RBP12.04□□□□□ -0.48
TRAF4-206ENST00000454852 DRAP1Q14919 205 aaPredicted RBP12.04□□□□□ -0.48
TRAF4-206ENST00000454852 RAB30Q15771 203 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 FAM109BQ6ICB4 259 aaPredicted RBP12.04□□□□□ -0.48
TRAF4-206ENST00000454852 FUT10Q6P4F1 479 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 GJB7Q6PEY0 223 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.04□□□□□ -0.48
TRAF4-206ENST00000454852 RRAGAQ7L523 313 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 CACNA2D4Q7Z3S7 1137 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 PPFIBP1Q86W92 1011 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 TMEM173Q86WV6 379 aaPredicted RBP12.04□□□□□ -0.48
TRAF4-206ENST00000454852 CNGA4Q8IV77 575 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 DRC7Q8IY82 874 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 APPL2Q8NEU8 664 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 BCL7CQ8WUZ0 217 aaPredicted RBP12.04□□□□□ -0.48
TRAF4-206ENST00000454852 KBTBD7Q8WVZ9 684 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 KAT5Q92993 513 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 PPP1R9BQ96SB3 815 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 ARID3AQ99856 593 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 OXCT2Q9BYC2 517 aaPredicted RBP12.04□□□□□ -0.48
TRAF4-206ENST00000454852 SDCBP2Q9H190 292 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 CHST7Q9NS84 486 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 CISHQ9NSE2 258 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 SPG21Q9NZD8 308 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 AIPL1Q9NZN9 384 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 NXF1Q9UBU9 619 aaKnown RBP12.04□□□□□ -0.48
TRAF4-206ENST00000454852 BARX2Q9UMQ3 279 aaPredicted RBP12.04□□□□□ -0.48
TRAF4-206ENST00000454852 L1RE1Q9UN81 338 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 POLIQ9UNA4 740 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 LZTS1Q9Y250 596 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 PRG3Q9Y2Y8 225 aaPredicted RBP12.04□□□□□ -0.48
TRAF4-206ENST00000454852 PCDHB12Q9Y5F1 795 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 PDE4DIPQ5VU43 2346 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 GBF1Q92538 1859 aa12.04□□□□□ -0.48
TRAF4-206ENST00000454852 F8W810 466 aa12.03□□□□□ -0.48
TRAF4-206ENST00000454852 FOXN3O00409 490 aaPredicted RBP12.03□□□□□ -0.48
TRAF4-206ENST00000454852 TPM1P09493 284 aa12.03□□□□□ -0.48
TRAF4-206ENST00000454852 FECHP22830 423 aa12.03□□□□□ -0.48
TRAF4-206ENST00000454852 SOX5P35711 763 aa12.03□□□□□ -0.48
TRAF4-206ENST00000454852 PRKCIP41743 596 aa12.03□□□□□ -0.48
TRAF4-206ENST00000454852 STAT1P42224 750 aa12.03□□□□□ -0.48
TRAF4-206ENST00000454852 BRCC3P46736 316 aa12.03□□□□□ -0.48
TRAF4-206ENST00000454852 LHX1P48742 406 aa12.03□□□□□ -0.48
TRAF4-206ENST00000454852 GSDMDP57764 484 aa12.03□□□□□ -0.48
TRAF4-206ENST00000454852 SMAD3P84022 425 aaKnown RBP12.03□□□□□ -0.48
TRAF4-206ENST00000454852 CCDC173Q0VFZ6 552 aa12.03□□□□□ -0.48
TRAF4-206ENST00000454852 PDXDC1Q6P996 788 aa12.03□□□□□ -0.48
TRAF4-206ENST00000454852 DSTYKQ6XUX3 929 aa12.03□□□□□ -0.48
TRAF4-206ENST00000454852 DDX53Q86TM3 631 aaKnown RBP12.03□□□□□ -0.48
TRAF4-206ENST00000454852 PDCL2Q8N4E4 241 aa12.03□□□□□ -0.48
TRAF4-206ENST00000454852 TC2NQ8N9U0 490 aa12.03□□□□□ -0.48
TRAF4-206ENST00000454852 ZNF397Q8NF99 534 aaPredicted RBP12.03□□□□□ -0.48
TRAF4-206ENST00000454852 WHAMMQ8TF30 809 aa12.03□□□□□ -0.48
TRAF4-206ENST00000454852 TMEM169Q96HH4 297 aa12.03□□□□□ -0.48
TRAF4-206ENST00000454852 PBX4Q9BYU1 374 aa12.03□□□□□ -0.48
TRAF4-206ENST00000454852 GPR62Q9BZJ7 368 aa12.03□□□□□ -0.48
TRAF4-206ENST00000454852 SMYD3Q9H7B4 428 aa12.03□□□□□ -0.48
TRAF4-206ENST00000454852 NLRC4Q9NPP4 1024 aa12.03□□□□□ -0.48
TRAF4-206ENST00000454852 STXBP5LQ9Y2K9 1186 aa12.03□□□□□ -0.48
TRAF4-206ENST00000454852 NLRC5Q86WI3 1866 aa12.03□□□□□ -0.48
TRAF4-206ENST00000454852 LRRC53A6NM62 1247 aa12.02□□□□□ -0.49
TRAF4-206ENST00000454852 GRXCR1A8MXD5 290 aa12.02□□□□□ -0.49
TRAF4-206ENST00000454852 GOLGA6L6A8MZA4 724 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms