RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 ZBTB45Q96K62 511 aaPredicted RBP13.28□□□□□ -0.28
ECHDC1-209ENST00000454591 SCLT1Q96NL6 688 aa13.28□□□□□ -0.28
ECHDC1-209ENST00000454591 C11orf70Q9BRQ4 267 aa13.28□□□□□ -0.28
ECHDC1-209ENST00000454591 TARS2Q9BW92 718 aaKnown RBP13.28□□□□□ -0.28
ECHDC1-209ENST00000454591 IMPG2Q9BZV3 1241 aa13.28□□□□□ -0.28
ECHDC1-209ENST00000454591 DDX56Q9NY93 547 aaKnown RBP13.28□□□□□ -0.28
ECHDC1-209ENST00000454591 SCAF8Q9UPN6 1271 aaKnown RBP13.28□□□□□ -0.28
ECHDC1-209ENST00000454591 ZSWIM8A7E2V4 1837 aa13.28□□□□□ -0.28
ECHDC1-209ENST00000454591 LRRIQ4A6NIV6 560 aa13.27□□□□□ -0.29
ECHDC1-209ENST00000454591 OGTO15294 1046 aa13.27□□□□□ -0.29
ECHDC1-209ENST00000454591 TLR3O15455 904 aaKnown RBP13.27□□□□□ -0.29
ECHDC1-209ENST00000454591 LIASO43766 372 aa13.27□□□□□ -0.29
ECHDC1-209ENST00000454591 MSCO60682 206 aa13.27□□□□□ -0.29
ECHDC1-209ENST00000454591 CDH16O75309 829 aa13.27□□□□□ -0.29
ECHDC1-209ENST00000454591 LGR5O75473 907 aa13.27□□□□□ -0.29
ECHDC1-209ENST00000454591 FARP2O94887 1054 aaPredicted RBP13.27□□□□□ -0.29
ECHDC1-209ENST00000454591 CALCAP01258 141 aa13.27□□□□□ -0.29
ECHDC1-209ENST00000454591 EDN1P05305 212 aa13.27□□□□□ -0.29
ECHDC1-209ENST00000454591 EIF4BP23588 611 aaKnown RBP13.27□□□□□ -0.29
ECHDC1-209ENST00000454591 BAG6P46379 1132 aa13.27□□□□□ -0.29
ECHDC1-209ENST00000454591 NR1H3Q13133 447 aa13.27□□□□□ -0.29
ECHDC1-209ENST00000454591 FBXW10Q5XX13 1052 aa13.27□□□□□ -0.29
ECHDC1-209ENST00000454591 LMBRD2Q68DH5 695 aaPredicted RBP13.27□□□□□ -0.29
ECHDC1-209ENST00000454591 ZNF365Q70YC5 407 aa13.27□□□□□ -0.29
ECHDC1-209ENST00000454591 TRMT1LQ7Z2T5 733 aaKnown RBP13.27□□□□□ -0.29
ECHDC1-209ENST00000454591 POLNQ7Z5Q5 900 aa13.27□□□□□ -0.29
ECHDC1-209ENST00000454591 OR5B17Q8NGF7 314 aa13.27□□□□□ -0.29
ECHDC1-209ENST00000454591 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.27□□□□□ -0.29
ECHDC1-209ENST00000454591 CKAP2Q8WWK9 683 aa13.27□□□□□ -0.29
ECHDC1-209ENST00000454591 TCP11Q8WWU5 503 aa13.27□□□□□ -0.29
ECHDC1-209ENST00000454591 ATG4AQ8WYN0 398 aa13.27□□□□□ -0.29
ECHDC1-209ENST00000454591 ARHGEF2Q92974 986 aaKnown RBP13.27□□□□□ -0.29
ECHDC1-209ENST00000454591 NKD2Q969F2 451 aaPredicted RBP13.27□□□□□ -0.29
ECHDC1-209ENST00000454591 TTC25Q96NG3 672 aa13.27□□□□□ -0.29
ECHDC1-209ENST00000454591 SLITRK1Q96PX8 696 aa13.27□□□□□ -0.29
ECHDC1-209ENST00000454591 CCDC77Q9BR77 488 aa13.27□□□□□ -0.29
ECHDC1-209ENST00000454591 PLCD4Q9BRC7 762 aa13.27□□□□□ -0.29
ECHDC1-209ENST00000454591 DDX23Q9BUQ8 820 aaKnown RBP13.27□□□□□ -0.29
ECHDC1-209ENST00000454591 UBN1Q9NPG3 1134 aa13.27□□□□□ -0.29
ECHDC1-209ENST00000454591 SAMD15Q9P1V8 674 aa13.27□□□□□ -0.29
ECHDC1-209ENST00000454591 SLC12A4Q9UP95 1085 aa13.27□□□□□ -0.29
ECHDC1-209ENST00000454591 DICER1Q9UPY3 1922 aaKnown RBP13.26□□□□□ -0.29
ECHDC1-209ENST00000454591 H0YHG0 523 aa13.26□□□□□ -0.29
ECHDC1-209ENST00000454591 O00370 1275 aa13.26□□□□□ -0.29
ECHDC1-209ENST00000454591 DNALI1O14645 258 aaPredicted RBP13.26□□□□□ -0.29
ECHDC1-209ENST00000454591 SNX3O60493 162 aa13.26□□□□□ -0.29
ECHDC1-209ENST00000454591 CFHP08603 1231 aa13.26□□□□□ -0.29
ECHDC1-209ENST00000454591 UBA1P22314 1058 aaKnown RBP13.26□□□□□ -0.29
ECHDC1-209ENST00000454591 PROZP22891 400 aa13.26□□□□□ -0.29
ECHDC1-209ENST00000454591 ADCY8P40145 1251 aa13.26□□□□□ -0.29
ECHDC1-209ENST00000454591 SCTRP47872 440 aa13.26□□□□□ -0.29
ECHDC1-209ENST00000454591 ZNF252P-AS1Q0IIN9 211 aa13.26□□□□□ -0.29
ECHDC1-209ENST00000454591 CBLBQ13191 982 aa13.26□□□□□ -0.29
ECHDC1-209ENST00000454591 SNX1Q13596 522 aa13.26□□□□□ -0.29
ECHDC1-209ENST00000454591 PIGHQ14442 188 aaPredicted RBP13.26□□□□□ -0.29
ECHDC1-209ENST00000454591 TAZQ16635 292 aa13.26□□□□□ -0.29
ECHDC1-209ENST00000454591 KCTD19Q17RG1 926 aaPredicted RBP13.26□□□□□ -0.29
ECHDC1-209ENST00000454591 SGSM1Q2NKQ1 1148 aa13.26□□□□□ -0.29
ECHDC1-209ENST00000454591 EAPPQ56P03 285 aaPredicted RBP13.26□□□□□ -0.29
ECHDC1-209ENST00000454591 ZBTB41Q5SVQ8 909 aa13.26□□□□□ -0.29
ECHDC1-209ENST00000454591 IZUMO3Q5VZ72 239 aa13.26□□□□□ -0.29
ECHDC1-209ENST00000454591 CCDC50Q8IVM0 306 aa13.26□□□□□ -0.29
ECHDC1-209ENST00000454591 ANKRD35Q8N283 1001 aa13.26□□□□□ -0.29
ECHDC1-209ENST00000454591 TMEM35BQ8NCS4 154 aa13.26□□□□□ -0.29
ECHDC1-209ENST00000454591 FNIP1Q8TF40 1166 aa13.26□□□□□ -0.29
ECHDC1-209ENST00000454591 SEPT1Q8WYJ6 367 aa13.26□□□□□ -0.29
ECHDC1-209ENST00000454591 MRPL4Q9BYD3 311 aaKnown RBP13.26□□□□□ -0.29
ECHDC1-209ENST00000454591 NIF3L1Q9GZT8 377 aa13.26□□□□□ -0.29
ECHDC1-209ENST00000454591 C2orf40Q9H1Z8 148 aa13.26□□□□□ -0.29
ECHDC1-209ENST00000454591 SLC40A1Q9NP59 571 aa13.26□□□□□ -0.29
ECHDC1-209ENST00000454591 FETUBQ9UGM5 382 aa13.26□□□□□ -0.29
ECHDC1-209ENST00000454591 CPSF3Q9UKF6 684 aaKnown RBP13.26□□□□□ -0.29
ECHDC1-209ENST00000454591 FAM170AA1A519 330 aa13.25□□□□□ -0.29
ECHDC1-209ENST00000454591 B4GALT4O60513 344 aa13.25□□□□□ -0.29
ECHDC1-209ENST00000454591 TJP3O95049 919 aa13.25□□□□□ -0.29
ECHDC1-209ENST00000454591 YWHAEP62258 255 aaKnown RBP13.25□□□□□ -0.29
ECHDC1-209ENST00000454591 MXD4Q14582 209 aaPredicted RBP13.25□□□□□ -0.29
ECHDC1-209ENST00000454591 OASLQ15646 514 aaKnown RBP13.25□□□□□ -0.29
ECHDC1-209ENST00000454591 LONRF1Q17RB8 773 aa13.25□□□□□ -0.29
ECHDC1-209ENST00000454591 METTL7BQ6UX53 244 aa13.25□□□□□ -0.29
ECHDC1-209ENST00000454591 CCDC25Q86WR0 208 aa13.25□□□□□ -0.29
ECHDC1-209ENST00000454591 ALLCQ8N6M5 410 aa13.25□□□□□ -0.29
ECHDC1-209ENST00000454591 ELMO3Q96BJ8 720 aa13.25□□□□□ -0.29
ECHDC1-209ENST00000454591 CCDC114Q96M63 670 aa13.25□□□□□ -0.29
ECHDC1-209ENST00000454591 ACO2Q99798 780 aaKnown RBP13.25□□□□□ -0.29
ECHDC1-209ENST00000454591 PRMT1Q99873 361 aaKnown RBP13.25□□□□□ -0.29
ECHDC1-209ENST00000454591 LHX5Q9H2C1 402 aa13.25□□□□□ -0.29
ECHDC1-209ENST00000454591 FAM124BQ9H5Z6 455 aaPredicted RBP13.25□□□□□ -0.29
ECHDC1-209ENST00000454591 OTOFQ9HC10 1997 aa13.25□□□□□ -0.29
ECHDC1-209ENST00000454591 hCG_1818297A0A087WSY0 165 aa13.24□□□□□ -0.29
ECHDC1-209ENST00000454591 LOC102724159A0A0B4J2E5 919 aa13.24□□□□□ -0.29
ECHDC1-209ENST00000454591 TMEM120BA0PK00 339 aa13.24□□□□□ -0.29
ECHDC1-209ENST00000454591 ACSL3O95573 720 aa13.24□□□□□ -0.29
ECHDC1-209ENST00000454591 ITGAVP06756 1048 aa13.24□□□□□ -0.29
ECHDC1-209ENST00000454591 WEE2P0C1S8 567 aa13.24□□□□□ -0.29
ECHDC1-209ENST00000454591 SLCO1A2P46721 670 aa13.24□□□□□ -0.29
ECHDC1-209ENST00000454591 STAT5BP51692 787 aa13.24□□□□□ -0.29
ECHDC1-209ENST00000454591 VCPP55072 806 aaKnown RBP13.24□□□□□ -0.29
ECHDC1-209ENST00000454591 MORF4L2Q15014 288 aa13.24□□□□□ -0.29
ECHDC1-209ENST00000454591 PWP2Q15269 919 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms