RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 PPP3CBP16298 524 aa3.14□□□□□ -1.91
LRCH3-209ENST00000452660 SLC6A4P31645 630 aa3.14□□□□□ -1.91
LRCH3-209ENST00000452660 FOXG1P55316 489 aaPredicted RBP3.14□□□□□ -1.91
LRCH3-209ENST00000452660 ERVK-21P61565 698 aa3.14□□□□□ -1.91
LRCH3-209ENST00000452660 TCF15Q12870 199 aa3.14□□□□□ -1.91
LRCH3-209ENST00000452660 BMPR2Q13873 1038 aa3.14□□□□□ -1.91
LRCH3-209ENST00000452660 STAT4Q14765 748 aa3.14□□□□□ -1.91
LRCH3-209ENST00000452660 PREPLQ4J6C6 727 aaPredicted RBP3.14□□□□□ -1.91
LRCH3-209ENST00000452660 RNF219Q5W0B1 726 aaPredicted RBP3.14□□□□□ -1.91
LRCH3-209ENST00000452660 SLC9A4Q6AI14 798 aa3.14□□□□□ -1.91
LRCH3-209ENST00000452660 PPP4R3AQ6IN85 833 aa3.14□□□□□ -1.91
LRCH3-209ENST00000452660 CEP85Q6P2H3 762 aa3.14□□□□□ -1.91
LRCH3-209ENST00000452660 ANKRD16Q6P6B7 361 aa3.14□□□□□ -1.91
LRCH3-209ENST00000452660 ZNF804AQ7Z570 1209 aa3.14□□□□□ -1.91
LRCH3-209ENST00000452660 STRA8Q7Z7C7 330 aa3.14□□□□□ -1.91
LRCH3-209ENST00000452660 SPATS2Q86XZ4 545 aaKnown RBP3.14□□□□□ -1.91
LRCH3-209ENST00000452660 DCBLD1Q8N8Z6 715 aa3.14□□□□□ -1.91
LRCH3-209ENST00000452660 IFI44Q8TCB0 444 aa3.14□□□□□ -1.91
LRCH3-209ENST00000452660 SCAMP4Q969E2 229 aa3.14□□□□□ -1.91
LRCH3-209ENST00000452660 RFKQ969G6 155 aa3.14□□□□□ -1.91
LRCH3-209ENST00000452660 HDAC10Q969S8 669 aa3.14□□□□□ -1.91
LRCH3-209ENST00000452660 KLHL32Q96NJ5 620 aa3.14□□□□□ -1.91
LRCH3-209ENST00000452660 TLR10Q9BXR5 811 aa3.14□□□□□ -1.91
LRCH3-209ENST00000452660 SLKQ9H2G2 1235 aaPredicted RBP3.14□□□□□ -1.91
LRCH3-209ENST00000452660 BHMT2Q9H2M3 363 aa3.14□□□□□ -1.91
LRCH3-209ENST00000452660 NRIP3Q9NQ35 241 aa3.14□□□□□ -1.91
LRCH3-209ENST00000452660 TDP1Q9NUW8 608 aa3.14□□□□□ -1.91
LRCH3-209ENST00000452660 EHD3Q9NZN3 535 aa3.14□□□□□ -1.91
LRCH3-209ENST00000452660 RUVBL1Q9Y265 456 aaKnown RBP3.14□□□□□ -1.91
LRCH3-209ENST00000452660 WASHC2AQ641Q2 1341 aa3.14□□□□□ -1.91
LRCH3-209ENST00000452660 ADGRA2Q96PE1 1338 aa3.14□□□□□ -1.91
LRCH3-209ENST00000452660 A0A0B4J269 797 aa3.13□□□□□ -1.91
LRCH3-209ENST00000452660 TARM1B6A8C7 271 aa3.13□□□□□ -1.91
LRCH3-209ENST00000452660 GPR39O43194 453 aa3.13□□□□□ -1.91
LRCH3-209ENST00000452660 VIL1P09327 827 aaKnown RBP3.13□□□□□ -1.91
LRCH3-209ENST00000452660 DRD4P21917 467 aa3.13□□□□□ -1.91
LRCH3-209ENST00000452660 NPTX2P47972 431 aa3.13□□□□□ -1.91
LRCH3-209ENST00000452660 KRT85P78386 507 aa3.13□□□□□ -1.91
LRCH3-209ENST00000452660 TUBB3Q13509 450 aa3.13□□□□□ -1.91
LRCH3-209ENST00000452660 ZNF626Q68DY1 528 aa3.13□□□□□ -1.91
LRCH3-209ENST00000452660 CRELD2Q6UXH1 353 aaPredicted RBP3.13□□□□□ -1.91
LRCH3-209ENST00000452660 ZNF551Q7Z340 670 aaPredicted RBP3.13□□□□□ -1.91
LRCH3-209ENST00000452660 KRT73Q86Y46 540 aa3.13□□□□□ -1.91
LRCH3-209ENST00000452660 CMIPQ8IY22 773 aa3.13□□□□□ -1.91
LRCH3-209ENST00000452660 SMOQ99835 787 aa3.13□□□□□ -1.91
LRCH3-209ENST00000452660 SIK2Q9H0K1 926 aa3.13□□□□□ -1.91
LRCH3-209ENST00000452660 MAN1C1Q9NR34 630 aa3.13□□□□□ -1.91
LRCH3-209ENST00000452660 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.13□□□□□ -1.91
LRCH3-209ENST00000452660 DNM3Q9UQ16 869 aa3.13□□□□□ -1.91
LRCH3-209ENST00000452660 CDYLQ9Y232 598 aa3.13□□□□□ -1.91
LRCH3-209ENST00000452660 TBC1D30Q9Y2I9 924 aa3.13□□□□□ -1.91
LRCH3-209ENST00000452660 FNDC1Q4ZHG4 1894 aaPredicted RBP3.12□□□□□ -1.91
LRCH3-209ENST00000452660 TRIM38O00635 465 aa3.12□□□□□ -1.91
LRCH3-209ENST00000452660 PRKD3O94806 890 aa3.12□□□□□ -1.91
LRCH3-209ENST00000452660 TUBB4AP04350 444 aa3.12□□□□□ -1.91
LRCH3-209ENST00000452660 CD1AP06126 327 aa3.12□□□□□ -1.91
LRCH3-209ENST00000452660 CHRM2P08172 466 aa3.12□□□□□ -1.91
LRCH3-209ENST00000452660 CBSLP0DN79 551 aa3.12□□□□□ -1.91
LRCH3-209ENST00000452660 CYP2C19P33261 490 aa3.12□□□□□ -1.91
LRCH3-209ENST00000452660 CBSP35520 551 aa3.12□□□□□ -1.91
LRCH3-209ENST00000452660 CCT8P50990 548 aa3.12□□□□□ -1.91
LRCH3-209ENST00000452660 SLC16A1P53985 500 aa3.12□□□□□ -1.91
LRCH3-209ENST00000452660 EXOSC10Q01780 885 aaKnown RBP3.12□□□□□ -1.91
LRCH3-209ENST00000452660 TARDBPQ13148 414 aaKnown RBP eCLIP3.12□□□□□ -1.91
LRCH3-209ENST00000452660 TWIST1Q15672 202 aa3.12□□□□□ -1.91
LRCH3-209ENST00000452660 PROSER3Q2NL68 480 aa3.12□□□□□ -1.91
LRCH3-209ENST00000452660 CD300EQ496F6 205 aaPredicted RBP3.12□□□□□ -1.91
LRCH3-209ENST00000452660 AARS2Q5JTZ9 985 aaKnown RBP3.12□□□□□ -1.91
LRCH3-209ENST00000452660 ZNF517Q6ZMY9 492 aaPredicted RBP3.12□□□□□ -1.91
LRCH3-209ENST00000452660 KRT26Q7Z3Y9 468 aa3.12□□□□□ -1.91
LRCH3-209ENST00000452660 WDR53Q7Z5U6 358 aaPredicted RBP3.12□□□□□ -1.91
LRCH3-209ENST00000452660 AMIGO2Q86SJ2 522 aa3.12□□□□□ -1.91
LRCH3-209ENST00000452660 RSPH3Q86UC2 560 aa3.12□□□□□ -1.91
LRCH3-209ENST00000452660 RASAL3Q86YV0 1011 aa3.12□□□□□ -1.91
LRCH3-209ENST00000452660 RHOT1Q8IXI2 618 aa3.12□□□□□ -1.91
LRCH3-209ENST00000452660 FAM9AQ8IZU1 332 aaPredicted RBP3.12□□□□□ -1.91
LRCH3-209ENST00000452660 FAM109AQ8N4B1 249 aa3.12□□□□□ -1.91
LRCH3-209ENST00000452660 DENND1AQ8TEH3 1009 aa3.12□□□□□ -1.91
LRCH3-209ENST00000452660 ATRIPQ8WXE1 791 aa3.12□□□□□ -1.91
LRCH3-209ENST00000452660 DDB2Q92466 427 aa3.12□□□□□ -1.91
LRCH3-209ENST00000452660 MRGPRX4Q96LA9 322 aa3.12□□□□□ -1.91
LRCH3-209ENST00000452660 ZNF48Q96MX3 618 aaPredicted RBP3.12□□□□□ -1.91
LRCH3-209ENST00000452660 TRIB1Q96RU8 372 aa3.12□□□□□ -1.91
LRCH3-209ENST00000452660 NELL2Q99435 816 aa3.12□□□□□ -1.91
LRCH3-209ENST00000452660 ADGRE3Q9BY15 652 aa3.12□□□□□ -1.91
LRCH3-209ENST00000452660 VTA1Q9NP79 307 aa3.12□□□□□ -1.91
LRCH3-209ENST00000452660 GNL3LQ9NVN8 582 aaKnown RBP3.12□□□□□ -1.91
LRCH3-209ENST00000452660 VSX1Q9NZR4 365 aaPredicted RBP3.12□□□□□ -1.91
LRCH3-209ENST00000452660 SH2B3Q9UQQ2 575 aa3.12□□□□□ -1.91
LRCH3-209ENST00000452660 TBX22Q9Y458 520 aa3.12□□□□□ -1.91
LRCH3-209ENST00000452660 VWC2LB2RUY7 222 aa3.11□□□□□ -1.91
LRCH3-209ENST00000452660 PPP6CO00743 305 aa3.11□□□□□ -1.91
LRCH3-209ENST00000452660 TOR1BO14657 336 aa3.11□□□□□ -1.91
LRCH3-209ENST00000452660 TP73O15350 636 aa3.11□□□□□ -1.91
LRCH3-209ENST00000452660 ONECUT2O95948 504 aa3.11□□□□□ -1.91
LRCH3-209ENST00000452660 FTH1P19P0C7X4 201 aa3.11□□□□□ -1.91
LRCH3-209ENST00000452660 OSMP13725 252 aa3.11□□□□□ -1.91
LRCH3-209ENST00000452660 ZFXP17010 805 aaPredicted RBP3.11□□□□□ -1.91
LRCH3-209ENST00000452660 HSD3B2P26439 372 aa3.11□□□□□ -1.91
LRCH3-209ENST00000452660 EPHB2P29323 1055 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms