RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 GTF2H1P32780 548 aa9.55□□□□□ -0.88
COL8A1-203ENST00000452013 MTHFRP42898 656 aa9.55□□□□□ -0.88
COL8A1-203ENST00000452013 LHX1P48742 406 aa9.55□□□□□ -0.88
COL8A1-203ENST00000452013 KCNQ1P51787 676 aa9.55□□□□□ -0.88
COL8A1-203ENST00000452013 ZNF445P59923 1031 aa9.55□□□□□ -0.88
COL8A1-203ENST00000452013 RBM10P98175 930 aaKnown RBP9.55□□□□□ -0.88
COL8A1-203ENST00000452013 BIRC3Q13489 604 aa9.55□□□□□ -0.88
COL8A1-203ENST00000452013 SMAD2Q15796 467 aaKnown RBP9.55□□□□□ -0.88
COL8A1-203ENST00000452013 SGSM1Q2NKQ1 1148 aa9.55□□□□□ -0.88
COL8A1-203ENST00000452013 RARS2Q5T160 578 aaKnown RBP9.55□□□□□ -0.88
COL8A1-203ENST00000452013 LIN9Q5TKA1 542 aa9.55□□□□□ -0.88
COL8A1-203ENST00000452013 KLHL10Q6JEL2 608 aa9.55□□□□□ -0.88
COL8A1-203ENST00000452013 SPATA31D4Q6ZUB0 917 aa9.55□□□□□ -0.88
COL8A1-203ENST00000452013 CCDC149Q6ZUS6 474 aa9.55□□□□□ -0.88
COL8A1-203ENST00000452013 TMEM130Q8N3G9 435 aa9.55□□□□□ -0.88
COL8A1-203ENST00000452013 SMRP1Q8NCR6 262 aa9.55□□□□□ -0.88
COL8A1-203ENST00000452013 CMASQ8NFW8 434 aaPredicted RBP9.55□□□□□ -0.88
COL8A1-203ENST00000452013 CXorf38Q8TB03 319 aa9.55□□□□□ -0.88
COL8A1-203ENST00000452013 SPATA18Q8TC71 538 aa9.55□□□□□ -0.88
COL8A1-203ENST00000452013 NELFBQ8WX92 580 aa9.55□□□□□ -0.88
COL8A1-203ENST00000452013 SYAP1Q96A49 352 aaPredicted RBP9.55□□□□□ -0.88
COL8A1-203ENST00000452013 CEP63Q96MT8 703 aa9.55□□□□□ -0.88
COL8A1-203ENST00000452013 NECTIN4Q96NY8 510 aa9.55□□□□□ -0.88
COL8A1-203ENST00000452013 METTL14Q9HCE5 456 aaKnown RBP9.55□□□□□ -0.88
COL8A1-203ENST00000452013 MAN1C1Q9NR34 630 aa9.55□□□□□ -0.88
COL8A1-203ENST00000452013 ZDHHC7Q9NXF8 308 aa9.55□□□□□ -0.88
COL8A1-203ENST00000452013 PRKAG3Q9UGI9 489 aa9.55□□□□□ -0.88
COL8A1-203ENST00000452013 DACH1Q9UI36 760 aa9.55□□□□□ -0.88
COL8A1-203ENST00000452013 SIX4Q9UIU6 781 aa9.55□□□□□ -0.88
COL8A1-203ENST00000452013 SNX9Q9Y5X1 595 aa9.55□□□□□ -0.88
COL8A1-203ENST00000452013 FNDC1Q4ZHG4 1894 aaPredicted RBP9.54□□□□□ -0.88
COL8A1-203ENST00000452013 CCDC195A0A1B0GUA6 201 aa9.54□□□□□ -0.88
COL8A1-203ENST00000452013 SLC16A3O15427 465 aaKnown RBP9.54□□□□□ -0.88
COL8A1-203ENST00000452013 ADAM12O43184 909 aa9.54□□□□□ -0.88
COL8A1-203ENST00000452013 ZMYND10O75800 440 aa9.54□□□□□ -0.88
COL8A1-203ENST00000452013 ABLIM3O94929 683 aa9.54□□□□□ -0.88
COL8A1-203ENST00000452013 STAU1O95793 577 aaKnown RBP9.54□□□□□ -0.88
COL8A1-203ENST00000452013 GNA14O95837 355 aa9.54□□□□□ -0.88
COL8A1-203ENST00000452013 HNRNPA1P09651 372 aaKnown RBP eCLIP9.54□□□□□ -0.88
COL8A1-203ENST00000452013 P4HA1P13674 534 aa9.54□□□□□ -0.88
COL8A1-203ENST00000452013 CPB1P15086 417 aa9.54□□□□□ -0.88
COL8A1-203ENST00000452013 ATF2P15336 505 aa9.54□□□□□ -0.88
COL8A1-203ENST00000452013 CD44P16070 742 aaKnown RBP9.54□□□□□ -0.88
COL8A1-203ENST00000452013 BMP6P22004 513 aa9.54□□□□□ -0.88
COL8A1-203ENST00000452013 MCCD1P59942 119 aaPredicted RBP9.54□□□□□ -0.88
COL8A1-203ENST00000452013 MYL7Q01449 175 aa9.54□□□□□ -0.88
COL8A1-203ENST00000452013 ROR1Q01973 937 aa9.54□□□□□ -0.88
COL8A1-203ENST00000452013 SMARCB1Q12824 385 aa9.54□□□□□ -0.88
COL8A1-203ENST00000452013 PAK1Q13153 545 aa9.54□□□□□ -0.88
COL8A1-203ENST00000452013 GPR17Q13304 367 aa9.54□□□□□ -0.88
COL8A1-203ENST00000452013 CT47A1Q5JQC4 288 aaPredicted RBP9.54□□□□□ -0.88
COL8A1-203ENST00000452013 PPM1LQ5SGD2 360 aa9.54□□□□□ -0.88
COL8A1-203ENST00000452013 WSCD1Q658N2 575 aa9.54□□□□□ -0.88
COL8A1-203ENST00000452013 RSPO2Q6UXX9 243 aaPredicted RBP9.54□□□□□ -0.88
COL8A1-203ENST00000452013 TMC5Q6UXY8 1006 aa9.54□□□□□ -0.88
COL8A1-203ENST00000452013 C15orf39Q6ZRI6 1047 aa9.54□□□□□ -0.88
COL8A1-203ENST00000452013 GPR149Q86SP6 731 aa9.54□□□□□ -0.88
COL8A1-203ENST00000452013 ZC3H3Q8IXZ2 948 aaKnown RBP9.54□□□□□ -0.88
COL8A1-203ENST00000452013 DCP1BQ8IZD4 617 aaKnown RBP9.54□□□□□ -0.88
COL8A1-203ENST00000452013 TOP6BLQ8N6T0 577 aa9.54□□□□□ -0.88
COL8A1-203ENST00000452013 C12orf76Q8N812 135 aaPredicted RBP9.54□□□□□ -0.88
COL8A1-203ENST00000452013 CCDC150Q8NCX0 1101 aa9.54□□□□□ -0.88
COL8A1-203ENST00000452013 PLEKHO2Q8TD55 490 aa9.54□□□□□ -0.88
COL8A1-203ENST00000452013 TAF4BQ92750 862 aa9.54□□□□□ -0.88
COL8A1-203ENST00000452013 MMS19Q96T76 1030 aa9.54□□□□□ -0.88
COL8A1-203ENST00000452013 APOL5Q9BWW9 433 aa9.54□□□□□ -0.88
COL8A1-203ENST00000452013 RHOBTB2Q9BYZ6 727 aa9.54□□□□□ -0.88
COL8A1-203ENST00000452013 PIDD1Q9HB75 910 aa9.54□□□□□ -0.88
COL8A1-203ENST00000452013 ARMCX3Q9UH62 379 aaPredicted RBP9.54□□□□□ -0.88
COL8A1-203ENST00000452013 AFF4Q9UHB7 1163 aaKnown RBP9.54□□□□□ -0.88
COL8A1-203ENST00000452013 FBXW11Q9UKB1 542 aa9.54□□□□□ -0.88
COL8A1-203ENST00000452013 USP15Q9Y4E8 981 aaPredicted RBP9.54□□□□□ -0.88
COL8A1-203ENST00000452013 MYH15Q9Y2K3 1946 aa9.54□□□□□ -0.88
COL8A1-203ENST00000452013 PTPRJQ12913 1337 aa9.54□□□□□ -0.88
COL8A1-203ENST00000452013 TRIM49BA6NDI0 452 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 PRRG1O14668 218 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 XYLBO75191 536 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 CLSTN1O94985 981 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 C8AP07357 584 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 IL9P15248 144 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 HOXA9P31269 272 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 PMS1P54277 932 aaKnown RBP9.53□□□□□ -0.88
COL8A1-203ENST00000452013 NLRP12P59046 1061 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 MYL6P60660 151 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 TNNC1P63316 161 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 DLG4P78352 724 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 TSPY1Q01534 308 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 CCDC173Q0VFZ6 552 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 NCOA4Q13772 614 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 CBX2Q14781 532 aaPredicted RBP9.53□□□□□ -0.88
COL8A1-203ENST00000452013 WDR72Q3MJ13 1102 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 ZACNQ401N2 412 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 CCDC40Q4G0X9 1142 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 HS1BP3Q53T59 392 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 TCERG1LQ5VWI1 586 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 KRT39Q6A163 491 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 TTI2Q6NXR4 508 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 SV2AQ7L0J3 742 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 FRMD5Q7Z6J6 570 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 TCEAL8Q8IYN2 117 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms