RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 LDHAP00338 332 aaKnown RBP7.05□□□□□ -1.28
USP46-202ENST00000451218 ATF7P17544 494 aaPredicted RBP7.05□□□□□ -1.28
USP46-202ENST00000451218 ABCB4P21439 1286 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 BEX3Q00994 111 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 SLC25A11Q02978 314 aaKnown RBP7.05□□□□□ -1.28
USP46-202ENST00000451218 OTUD1Q5VV17 481 aaPredicted RBP7.05□□□□□ -1.28
USP46-202ENST00000451218 CRIPAKQ8N1N5 446 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 C2orf69Q8N8R5 385 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 ZNF606Q8WXB4 792 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 UBXN4Q92575 508 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 GLG1Q92896 1179 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 FAXDC2Q96IV6 333 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 RPS6KC1Q96S38 1066 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 PPP1R16BQ96T49 567 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 DEF6Q9H4E7 631 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 TMEM30AQ9NV96 361 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 TUBGCP4Q9UGJ1 667 aa7.05□□□□□ -1.28
USP46-202ENST00000451218 CHRNA1P02708 482 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 FGFR1P11362 822 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 GRM5P41594 1212 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 GJA9P57773 515 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 PTPN20Q4JDL3 420 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 ZNF677Q86XU0 584 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 RBBP8NLQ8NC74 664 aaPredicted RBP7.04□□□□□ -1.28
USP46-202ENST00000451218 APBA2Q99767 749 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 C2orf40Q9H1Z8 148 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 CARD9Q9H257 536 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 OGFRQ9NZT2 677 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 TET1Q8NFU7 2136 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 ASAP2O43150 1006 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 ATP8B1O43520 1251 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 DARSP14868 501 aaKnown RBP7.04□□□□□ -1.28
USP46-202ENST00000451218 CDH8P55286 799 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 GPC5P78333 572 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 TNFAIP2Q03169 654 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 MAPK6Q16659 721 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 ZNF618Q5T7W0 954 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 DENND1BQ6P3S1 775 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 RHBDF2Q6PJF5 856 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 MREGQ8N565 214 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 OR6J1Q8NGC5 347 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 SLCO2A1Q92959 643 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 VTI1AQ96AJ9 217 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 RPGRIP1Q96KN7 1286 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 CALR3Q96L12 384 aaKnown RBP7.04□□□□□ -1.28
USP46-202ENST00000451218 LPIN3Q9BQK8 851 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.04□□□□□ -1.28
USP46-202ENST00000451218 NUP85Q9BW27 656 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 NXF3Q9H4D5 531 aaKnown RBP7.04□□□□□ -1.28
USP46-202ENST00000451218 ESYT3A0FGR9 886 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 TMEM191CA6NGB0 347 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 MANSC4A6NHS7 340 aaPredicted RBP7.04□□□□□ -1.28
USP46-202ENST00000451218 TULP2O00295 520 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 PIRO00625 290 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 B4GALT3O60512 393 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 TMEM191BP0C7N4 346 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 PIK3CAP42336 1068 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 DUPD1Q68J44 220 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 BHLHA9Q7RTU4 235 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 ZNF410Q86VK4 478 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 SESTD1Q86VW0 696 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 IQCKQ8N0W5 287 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 NIPA2Q8N8Q9 360 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 AZI2Q9H6S1 392 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 R3HDM2Q9Y2K5 976 aaKnown RBP7.04□□□□□ -1.28
USP46-202ENST00000451218 DNAH14Q0VDD8 3507 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 MGEA5O60502 916 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 ERBB2P04626 1255 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 IL1R2P27930 398 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 GPD2P43304 727 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 CCNA1P78396 465 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 STRN3Q13033 797 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 MFSD10Q14728 455 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 CASP8Q14790 479 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 DGKDQ16760 1214 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 KIZQ2M2Z5 673 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 TCTN1Q2MV58 587 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 RPAINQ86UA6 219 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 FAM228AQ86W67 206 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 C18orf25Q96B23 403 aaPredicted RBP7.04□□□□□ -1.28
USP46-202ENST00000451218 CPXM1Q96SM3 734 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 CELF4Q9BZC1 486 aaKnown RBP7.04□□□□□ -1.28
USP46-202ENST00000451218 SENP6Q9GZR1 1112 aaPredicted RBP7.04□□□□□ -1.28
USP46-202ENST00000451218 PRMT7Q9NVM4 692 aaPredicted RBP7.04□□□□□ -1.28
USP46-202ENST00000451218 HES2Q9Y543 173 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 NRCAMQ92823 1304 aa7.04□□□□□ -1.28
USP46-202ENST00000451218 NOP56O00567 594 aaKnown RBP7.03□□□□□ -1.28
USP46-202ENST00000451218 AMHP03971 560 aa7.03□□□□□ -1.28
USP46-202ENST00000451218 BRD2P25440 801 aaKnown RBP7.03□□□□□ -1.28
USP46-202ENST00000451218 SNX17Q15036 470 aa7.03□□□□□ -1.28
USP46-202ENST00000451218 GDF6Q6KF10 455 aaPredicted RBP7.03□□□□□ -1.28
USP46-202ENST00000451218 ZNF564Q8TBZ8 553 aaPredicted RBP7.03□□□□□ -1.28
USP46-202ENST00000451218 SELENOOQ9BVL4 669 aa7.03□□□□□ -1.28
USP46-202ENST00000451218 AP1M1Q9BXS5 423 aa7.03□□□□□ -1.28
USP46-202ENST00000451218 RNF19AQ9NV58 838 aa7.03□□□□□ -1.28
USP46-202ENST00000451218 STIM2Q9P246 746 aa7.03□□□□□ -1.28
USP46-202ENST00000451218 TSKSQ9UJT2 592 aa7.03□□□□□ -1.28
USP46-202ENST00000451218 DOCK4Q8N1I0 1966 aa7.03□□□□□ -1.28
USP46-202ENST00000451218 FSCN2O14926 492 aa7.03□□□□□ -1.28
USP46-202ENST00000451218 WEE2P0C1S8 567 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms