RNA–Protein interactions for RNA: ENST00000450991.6

NECAP1-202, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 1 (best)

Gene NECAP1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-202ENST00000450991 CKBP12277 381 aa8.82□□□□□ -1
NECAP1-202ENST00000450991 GNA15P30679 374 aa8.82□□□□□ -1
NECAP1-202ENST00000450991 POLR2BP30876 1174 aaKnown RBP8.82□□□□□ -1
NECAP1-202ENST00000450991 YARSP54577 528 aaKnown RBP8.82□□□□□ -1
NECAP1-202ENST00000450991 GPC5P78333 572 aa8.82□□□□□ -1
NECAP1-202ENST00000450991 PAK2Q13177 524 aa8.82□□□□□ -1
NECAP1-202ENST00000450991 ACAD10Q6JQN1 1059 aa8.82□□□□□ -1
NECAP1-202ENST00000450991 ALKAL1Q6UXT8 129 aa8.82□□□□□ -1
NECAP1-202ENST00000450991 RPAINQ86UA6 219 aa8.82□□□□□ -1
NECAP1-202ENST00000450991 SLC43A3Q8NBI5 491 aa8.82□□□□□ -1
NECAP1-202ENST00000450991 UBXN4Q92575 508 aa8.82□□□□□ -1
NECAP1-202ENST00000450991 LPPQ93052 612 aa8.82□□□□□ -1
NECAP1-202ENST00000450991 MMS19Q96T76 1030 aa8.82□□□□□ -1
NECAP1-202ENST00000450991 TRAIPQ9BWF2 469 aa8.82□□□□□ -1
NECAP1-202ENST00000450991 ABCB6Q9NP58 842 aa8.82□□□□□ -1
NECAP1-202ENST00000450991 NXF1Q9UBU9 619 aaKnown RBP8.82□□□□□ -1
NECAP1-202ENST00000450991 TUBGCP4Q9UGJ1 667 aa8.82□□□□□ -1
NECAP1-202ENST00000450991 POLIQ9UNA4 740 aa8.82□□□□□ -1
NECAP1-202ENST00000450991 DERAQ9Y315 318 aa8.82□□□□□ -1
NECAP1-202ENST00000450991 CTAGE15A4D2H0 777 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 PPEF2O14830 753 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 STAU1O95793 577 aaKnown RBP8.81□□□□□ -1
NECAP1-202ENST00000450991 CYP1A2P05177 515 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 CTAGE8P0CG41 777 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 CD58P19256 250 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 ATICP31939 592 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 RAP1GAPP47736 663 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 PTPN11Q06124 597 aaPredicted RBP8.81□□□□□ -1
NECAP1-202ENST00000450991 CKAP4Q07065 602 aaKnown RBP8.81□□□□□ -1
NECAP1-202ENST00000450991 MBTPS1Q14703 1052 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 CTAGE6Q86UF2 777 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 CTAGE4Q8IX94 777 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 RHOT2Q8IXI1 618 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 SYCE1Q8N0S2 351 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 RNF169Q8NCN4 708 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 DIS3LQ8TF46 1054 aaKnown RBP8.81□□□□□ -1
NECAP1-202ENST00000450991 RABGGTAQ92696 567 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 CAPZA3Q96KX2 299 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 CALR3Q96L12 384 aaKnown RBP8.81□□□□□ -1
NECAP1-202ENST00000450991 ZFP42Q96MM3 310 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 GOLPH3Q9H4A6 298 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 CISHQ9NSE2 258 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 DPP3Q9NY33 737 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 PCDH10Q9P2E7 1040 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 ITGA11Q9UKX5 1188 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 OGDHLQ9ULD0 1010 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 GPR182O15218 404 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 BUB1BO60566 1050 aaPredicted RBP8.81□□□□□ -1
NECAP1-202ENST00000450991 KIF4AO95239 1232 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 CFHP08603 1231 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 WEE2P0C1S8 567 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 ZSCAN20P17040 1043 aaPredicted RBP8.81□□□□□ -1
NECAP1-202ENST00000450991 SSTR3P32745 418 aaPredicted RBP8.81□□□□□ -1
NECAP1-202ENST00000450991 AFF1P51825 1210 aaKnown RBP8.81□□□□□ -1
NECAP1-202ENST00000450991 CENPCQ03188 943 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 ZBTB6Q15916 424 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 ZNF394Q53GI3 561 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 ZNF667Q5HYK9 610 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 TEX35Q5T0J7 233 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 TRAF7Q6Q0C0 670 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 TRIM72Q6ZMU5 477 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 CTU1Q7Z7A3 348 aaKnown RBP8.81□□□□□ -1
NECAP1-202ENST00000450991 NT5DC3Q86UY8 548 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 SDCBP2Q9H190 292 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 GOLGA2P5Q9HBQ8 144 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 ERVK-5Q9HDB9 667 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 FAM105AQ9NUU6 356 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 CNTN3Q9P232 1028 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 GTF3C4Q9UKN8 822 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 PACSIN2Q9UNF0 486 aaPredicted RBP8.81□□□□□ -1
NECAP1-202ENST00000450991 AGAP1Q9UPQ3 857 aa8.81□□□□□ -1
NECAP1-202ENST00000450991 CES2O00748 559 aa8.8□□□□□ -1
NECAP1-202ENST00000450991 ATMINO43313 823 aaPredicted RBP8.8□□□□□ -1
NECAP1-202ENST00000450991 CXCR5P32302 372 aa8.8□□□□□ -1
NECAP1-202ENST00000450991 YWHAEP62258 255 aaKnown RBP8.8□□□□□ -1
NECAP1-202ENST00000450991 TUBB4BP68371 445 aa8.8□□□□□ -1
NECAP1-202ENST00000450991 NOMO3P69849 1222 aa8.8□□□□□ -1
NECAP1-202ENST00000450991 WDR72Q3MJ13 1102 aa8.8□□□□□ -1
NECAP1-202ENST00000450991 XKR4Q5GH76 650 aa8.8□□□□□ -1
NECAP1-202ENST00000450991 FAM126BQ8IXS8 530 aa8.8□□□□□ -1
NECAP1-202ENST00000450991 NOA1Q8NC60 698 aaKnown RBP8.8□□□□□ -1
NECAP1-202ENST00000450991 ZNF606Q8WXB4 792 aa8.8□□□□□ -1
NECAP1-202ENST00000450991 HES6Q96HZ4 224 aa8.8□□□□□ -1
NECAP1-202ENST00000450991 ZNF333Q96JL9 665 aa8.8□□□□□ -1
NECAP1-202ENST00000450991 RPGRIP1Q96KN7 1286 aa8.8□□□□□ -1
NECAP1-202ENST00000450991 PSMB7Q99436 277 aa8.8□□□□□ -1
NECAP1-202ENST00000450991 ZSWIM1Q9BR11 485 aa8.8□□□□□ -1
NECAP1-202ENST00000450991 CACNG4Q9UBN1 327 aa8.8□□□□□ -1
NECAP1-202ENST00000450991 TSC2P49815 1807 aa8.8□□□□□ -1
NECAP1-202ENST00000450991 SMIM28A0A1B0GU29 152 aa8.8□□□□□ -1
NECAP1-202ENST00000450991 THAP12O43422 761 aa8.8□□□□□ -1
NECAP1-202ENST00000450991 MLH1P40692 756 aa8.8□□□□□ -1
NECAP1-202ENST00000450991 MNX1P50219 401 aaPredicted RBP8.8□□□□□ -1
NECAP1-202ENST00000450991 CDK7P50613 346 aa8.8□□□□□ -1
NECAP1-202ENST00000450991 CDH8P55286 799 aa8.8□□□□□ -1
NECAP1-202ENST00000450991 RBP5P82980 135 aa8.8□□□□□ -1
NECAP1-202ENST00000450991 ITIH3Q06033 890 aa8.8□□□□□ -1
NECAP1-202ENST00000450991 ORC1Q13415 861 aa8.8□□□□□ -1
NECAP1-202ENST00000450991 RPS6KA1Q15418 735 aa8.8□□□□□ -1
NECAP1-202ENST00000450991 C11orf63Q6NUN7 778 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms