RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 EXOC7Q9UPT5 735 aa18.43■□□□□ 0.54
PRPF40A-204ENST00000450303 STYXL1Q9Y6J8 313 aa18.43■□□□□ 0.54
PRPF40A-204ENST00000450303 NOTCH4Q99466 2003 aa18.43■□□□□ 0.54
PRPF40A-204ENST00000450303 KMT2EQ8IZD2 1858 aa18.43■□□□□ 0.54
PRPF40A-204ENST00000450303 UBE4BO95155 1302 aa18.43■□□□□ 0.54
PRPF40A-204ENST00000450303 XPOTO43592 962 aaKnown RBP18.42■□□□□ 0.54
PRPF40A-204ENST00000450303 ABLIM3O94929 683 aa18.42■□□□□ 0.54
PRPF40A-204ENST00000450303 SEC24AO95486 1093 aa18.42■□□□□ 0.54
PRPF40A-204ENST00000450303 ADSSP30520 456 aa18.42■□□□□ 0.54
PRPF40A-204ENST00000450303 HOXA9P31269 272 aa18.42■□□□□ 0.54
PRPF40A-204ENST00000450303 ELF1P32519 619 aa18.42■□□□□ 0.54
PRPF40A-204ENST00000450303 TYRO3Q06418 890 aa18.42■□□□□ 0.54
PRPF40A-204ENST00000450303 COBLL1Q53SF7 1204 aa18.42■□□□□ 0.54
PRPF40A-204ENST00000450303 CT47A1Q5JQC4 288 aaPredicted RBP18.42■□□□□ 0.54
PRPF40A-204ENST00000450303 SPATA1Q5VX52 437 aa18.42■□□□□ 0.54
PRPF40A-204ENST00000450303 LRSAM1Q6UWE0 723 aa18.42■□□□□ 0.54
PRPF40A-204ENST00000450303 ZSWIM2Q8NEG5 633 aa18.42■□□□□ 0.54
PRPF40A-204ENST00000450303 APPL2Q8NEU8 664 aa18.42■□□□□ 0.54
PRPF40A-204ENST00000450303 BEST2Q8NFU1 509 aa18.42■□□□□ 0.54
PRPF40A-204ENST00000450303 ITFG1Q8TB96 612 aa18.42■□□□□ 0.54
PRPF40A-204ENST00000450303 HPS3Q969F9 1004 aa18.42■□□□□ 0.54
PRPF40A-204ENST00000450303 NAT10Q9H0A0 1025 aaKnown RBP18.42■□□□□ 0.54
PRPF40A-204ENST00000450303 TMEM206Q9H813 350 aa18.42■□□□□ 0.54
PRPF40A-204ENST00000450303 CYP4F11Q9HBI6 524 aa18.42■□□□□ 0.54
PRPF40A-204ENST00000450303 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.42■□□□□ 0.54
PRPF40A-204ENST00000450303 IGSF9Q9P2J2 1179 aa18.42■□□□□ 0.54
PRPF40A-204ENST00000450303 DNMT3BQ9UBC3 853 aaKnown RBP18.42■□□□□ 0.54
PRPF40A-204ENST00000450303 ZDBF2Q9HCK1 2354 aa18.42■□□□□ 0.54
PRPF40A-204ENST00000450303 MUC6Q6W4X9 2439 aa18.42■□□□□ 0.54
PRPF40A-204ENST00000450303 M0QZQ0 153 aa18.41■□□□□ 0.54
PRPF40A-204ENST00000450303 PRRG1O14668 218 aa18.41■□□□□ 0.54
PRPF40A-204ENST00000450303 PSMA7O14818 248 aa18.41■□□□□ 0.54
PRPF40A-204ENST00000450303 PRPF6O94906 941 aaKnown RBP18.41■□□□□ 0.54
PRPF40A-204ENST00000450303 AVPR2P30518 371 aa18.41■□□□□ 0.54
PRPF40A-204ENST00000450303 TMEM132DQ14C87 1099 aa18.41■□□□□ 0.54
PRPF40A-204ENST00000450303 ZNF280DQ6N043 979 aa18.41■□□□□ 0.54
PRPF40A-204ENST00000450303 CRELD2Q6UXH1 353 aaPredicted RBP18.41■□□□□ 0.54
PRPF40A-204ENST00000450303 CD302Q8IX05 232 aa18.41■□□□□ 0.54
PRPF40A-204ENST00000450303 SYCP3Q8IZU3 236 aa18.41■□□□□ 0.54
PRPF40A-204ENST00000450303 GUF1Q8N442 669 aaKnown RBP18.41■□□□□ 0.54
PRPF40A-204ENST00000450303 SLC44A3Q8N4M1 653 aa18.41■□□□□ 0.54
PRPF40A-204ENST00000450303 KIAA0895Q8NCT3 520 aa18.41■□□□□ 0.54
PRPF40A-204ENST00000450303 ZNF507Q8TCN5 953 aa18.41■□□□□ 0.54
PRPF40A-204ENST00000450303 SAAL1Q96ER3 474 aa18.41■□□□□ 0.54
PRPF40A-204ENST00000450303 SCN1AP35498 2009 aa18.4■□□□□ 0.54
PRPF40A-204ENST00000450303 SPTLC1O15269 473 aa18.4■□□□□ 0.54
PRPF40A-204ENST00000450303 CFHP08603 1231 aa18.4■□□□□ 0.54
PRPF40A-204ENST00000450303 OR4Q2P0C623 313 aa18.4■□□□□ 0.54
PRPF40A-204ENST00000450303 CPB1P15086 417 aa18.4■□□□□ 0.54
PRPF40A-204ENST00000450303 ATF2P15336 505 aa18.4■□□□□ 0.54
PRPF40A-204ENST00000450303 C9orf57Q5W0N0 161 aa18.4■□□□□ 0.54
PRPF40A-204ENST00000450303 GLIS3Q8NEA6 775 aa18.4■□□□□ 0.54
PRPF40A-204ENST00000450303 PRSS33Q8NF86 280 aa18.4■□□□□ 0.54
PRPF40A-204ENST00000450303 NOC3LQ8WTT2 800 aaKnown RBP18.4■□□□□ 0.54
PRPF40A-204ENST00000450303 ING5Q8WYH8 240 aa18.4■□□□□ 0.54
PRPF40A-204ENST00000450303 DHTKD1Q96HY7 919 aaPredicted RBP18.4■□□□□ 0.54
PRPF40A-204ENST00000450303 TSPAN18Q96SJ8 248 aa18.4■□□□□ 0.54
PRPF40A-204ENST00000450303 FAM213AQ9BRX8 229 aa18.4■□□□□ 0.54
PRPF40A-204ENST00000450303 FBXL21Q9UKT6 434 aa18.4■□□□□ 0.54
PRPF40A-204ENST00000450303 DUSP12Q9UNI6 340 aa18.4■□□□□ 0.54
PRPF40A-204ENST00000450303 GOLGA8IPA6NC78 632 aa18.39■□□□□ 0.53
PRPF40A-204ENST00000450303 GOLGA8JA6NMD2 632 aa18.39■□□□□ 0.53
PRPF40A-204ENST00000450303 CAVIN2O95810 425 aa18.39■□□□□ 0.53
PRPF40A-204ENST00000450303 LRG1P02750 347 aa18.39■□□□□ 0.53
PRPF40A-204ENST00000450303 PRCPP42785 496 aa18.39■□□□□ 0.53
PRPF40A-204ENST00000450303 AARSP49588 968 aaKnown RBP eCLIP18.39■□□□□ 0.53
PRPF40A-204ENST00000450303 WNT7BP56706 349 aa18.39■□□□□ 0.53
PRPF40A-204ENST00000450303 LILRA4P59901 499 aa18.39■□□□□ 0.53
PRPF40A-204ENST00000450303 YWHAHQ04917 246 aaPredicted RBP18.39■□□□□ 0.53
PRPF40A-204ENST00000450303 ADCY1Q08828 1119 aa18.39■□□□□ 0.53
PRPF40A-204ENST00000450303 BMT2Q1RMZ1 405 aa18.39■□□□□ 0.53
PRPF40A-204ENST00000450303 PABPC1LQ4VXU2 614 aaKnown RBP18.39■□□□□ 0.53
PRPF40A-204ENST00000450303 RNF19BQ6ZMZ0 732 aa18.39■□□□□ 0.53
PRPF40A-204ENST00000450303 EPM2AIP1Q7L775 607 aaPredicted RBP18.39■□□□□ 0.53
PRPF40A-204ENST00000450303 USP37Q86T82 979 aa18.39■□□□□ 0.53
PRPF40A-204ENST00000450303 GAS2L3Q86XJ1 694 aa18.39■□□□□ 0.53
PRPF40A-204ENST00000450303 FGF13Q92913 245 aa18.39■□□□□ 0.53
PRPF40A-204ENST00000450303 RPP25Q9BUL9 199 aaKnown RBP18.39■□□□□ 0.53
PRPF40A-204ENST00000450303 MFSD1Q9H3U5 465 aa18.39■□□□□ 0.53
PRPF40A-204ENST00000450303 TSPY26PQ9H489 355 aa18.39■□□□□ 0.53
PRPF40A-204ENST00000450303 PCIF1Q9H4Z3 704 aa18.39■□□□□ 0.53
PRPF40A-204ENST00000450303 ASB7Q9H672 318 aa18.39■□□□□ 0.53
PRPF40A-204ENST00000450303 CDH7Q9ULB5 785 aa18.39■□□□□ 0.53
PRPF40A-204ENST00000450303 DERAQ9Y315 318 aa18.39■□□□□ 0.53
PRPF40A-204ENST00000450303 NUMBLQ9Y6R0 609 aa18.39■□□□□ 0.53
PRPF40A-204ENST00000450303 BICDL2A1A5D9 508 aa18.38■□□□□ 0.53
PRPF40A-204ENST00000450303 ARHGEF37A1IGU5 675 aa18.38■□□□□ 0.53
PRPF40A-204ENST00000450303 PIRO00625 290 aa18.38■□□□□ 0.53
PRPF40A-204ENST00000450303 BMP6P22004 513 aa18.38■□□□□ 0.53
PRPF40A-204ENST00000450303 HTR4Q13639 388 aa18.38■□□□□ 0.53
PRPF40A-204ENST00000450303 KNOP1Q1ED39 458 aaKnown RBP18.38■□□□□ 0.53
PRPF40A-204ENST00000450303 DPCR1Q3MIW9 517 aa18.38■□□□□ 0.53
PRPF40A-204ENST00000450303 PARM1Q6UWI2 310 aa18.38■□□□□ 0.53
PRPF40A-204ENST00000450303 EFCAB13Q8IY85 973 aa18.38■□□□□ 0.53
PRPF40A-204ENST00000450303 TCEAL8Q8IYN2 117 aa18.38■□□□□ 0.53
PRPF40A-204ENST00000450303 SMYD4Q8IYR2 804 aaPredicted RBP18.38■□□□□ 0.53
PRPF40A-204ENST00000450303 ADSSL1Q8N142 457 aa18.38■□□□□ 0.53
PRPF40A-204ENST00000450303 FLCNQ8NFG4 579 aa18.38■□□□□ 0.53
PRPF40A-204ENST00000450303 SCFD1Q8WVM8 642 aa18.38■□□□□ 0.53
PRPF40A-204ENST00000450303 SENP8Q96LD8 212 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms