RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 CLDN3O15551 220 aa14.58□□□□□ -0.07
ITGB4-202ENST00000449880 EYA4O95677 639 aa14.58□□□□□ -0.07
ITGB4-202ENST00000449880 IFNA8P32881 189 aa14.58□□□□□ -0.07
ITGB4-202ENST00000449880 SERPINB8P50452 374 aa14.58□□□□□ -0.07
ITGB4-202ENST00000449880 MDM1Q8TC05 714 aa14.58□□□□□ -0.07
ITGB4-202ENST00000449880 ARHGEF26Q96DR7 871 aa14.58□□□□□ -0.07
ITGB4-202ENST00000449880 RMDN3Q96TC7 470 aa14.58□□□□□ -0.07
ITGB4-202ENST00000449880 MTMR4Q9NYA4 1195 aa14.58□□□□□ -0.07
ITGB4-202ENST00000449880 GOLGA8IPA6NC78 632 aa14.58□□□□□ -0.08
ITGB4-202ENST00000449880 GOLGA8JA6NMD2 632 aa14.58□□□□□ -0.08
ITGB4-202ENST00000449880 SASH3O75995 380 aa14.58□□□□□ -0.08
ITGB4-202ENST00000449880 ITGA8P53708 1063 aa14.58□□□□□ -0.08
ITGB4-202ENST00000449880 KRT76Q01546 638 aa14.58□□□□□ -0.08
ITGB4-202ENST00000449880 DDR1Q08345 913 aa14.58□□□□□ -0.08
ITGB4-202ENST00000449880 GRID1Q9ULK0 1009 aa14.58□□□□□ -0.08
ITGB4-202ENST00000449880 CDYLQ9Y232 598 aa14.58□□□□□ -0.08
ITGB4-202ENST00000449880 AP5Z1O43299 807 aa14.58□□□□□ -0.08
ITGB4-202ENST00000449880 AKAP10O43572 662 aa14.58□□□□□ -0.08
ITGB4-202ENST00000449880 BNIP3LO60238 219 aa14.58□□□□□ -0.08
ITGB4-202ENST00000449880 ATP9AO75110 1047 aa14.58□□□□□ -0.08
ITGB4-202ENST00000449880 TDP2O95551 362 aa14.58□□□□□ -0.08
ITGB4-202ENST00000449880 TSPY1Q01534 308 aa14.58□□□□□ -0.08
ITGB4-202ENST00000449880 KBTBD12Q3ZCT8 623 aa14.58□□□□□ -0.08
ITGB4-202ENST00000449880 PADI6Q6TGC4 694 aa14.58□□□□□ -0.08
ITGB4-202ENST00000449880 CCNYL1Q8N7R7 359 aa14.58□□□□□ -0.08
ITGB4-202ENST00000449880 NGRNQ9NPE2 291 aaKnown RBP14.58□□□□□ -0.08
ITGB4-202ENST00000449880 MAGED2Q9UNF1 606 aaPredicted RBP14.58□□□□□ -0.08
ITGB4-202ENST00000449880 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.58□□□□□ -0.08
ITGB4-202ENST00000449880 M0R3G1 203 aa14.58□□□□□ -0.08
ITGB4-202ENST00000449880 ABLIM1O14639 778 aa14.58□□□□□ -0.08
ITGB4-202ENST00000449880 PSMD3O43242 534 aa14.58□□□□□ -0.08
ITGB4-202ENST00000449880 CSPG5O95196 566 aa14.58□□□□□ -0.08
ITGB4-202ENST00000449880 BCAR1P56945 870 aa14.58□□□□□ -0.08
ITGB4-202ENST00000449880 C4orf33Q8N1A6 199 aa14.58□□□□□ -0.08
ITGB4-202ENST00000449880 NSUN6Q8TEA1 469 aaKnown RBP14.58□□□□□ -0.08
ITGB4-202ENST00000449880 PRPF18Q99633 342 aaKnown RBP14.58□□□□□ -0.08
ITGB4-202ENST00000449880 ZNF839A8K0R7 811 aa14.57□□□□□ -0.08
ITGB4-202ENST00000449880 APOL1O14791 398 aa14.57□□□□□ -0.08
ITGB4-202ENST00000449880 SNX2O60749 519 aa14.57□□□□□ -0.08
ITGB4-202ENST00000449880 RWDD4Q6NW29 188 aaKnown RBP14.57□□□□□ -0.08
ITGB4-202ENST00000449880 ZNF677Q86XU0 584 aa14.57□□□□□ -0.08
ITGB4-202ENST00000449880 FUKQ8N0W3 1084 aa14.57□□□□□ -0.08
ITGB4-202ENST00000449880 PI4K2BG5E9Z4 385 aa14.57□□□□□ -0.08
ITGB4-202ENST00000449880 HUS1O60921 280 aa14.57□□□□□ -0.08
ITGB4-202ENST00000449880 UBOX5O94941 541 aa14.57□□□□□ -0.08
ITGB4-202ENST00000449880 FAM200BP0CF97 657 aa14.57□□□□□ -0.08
ITGB4-202ENST00000449880 KLRC1P26715 233 aa14.57□□□□□ -0.08
ITGB4-202ENST00000449880 HOXD10P28358 340 aa14.57□□□□□ -0.08
ITGB4-202ENST00000449880 SLC34A1Q06495 639 aa14.57□□□□□ -0.08
ITGB4-202ENST00000449880 TMEM270Q6UE05 265 aa14.57□□□□□ -0.08
ITGB4-202ENST00000449880 ADNPQ9H2P0 1102 aa14.57□□□□□ -0.08
ITGB4-202ENST00000449880 WDR35Q9P2L0 1181 aa14.57□□□□□ -0.08
ITGB4-202ENST00000449880 MON2Q7Z3U7 1717 aa14.57□□□□□ -0.08
ITGB4-202ENST00000449880 CLPTM1O96005 669 aa14.57□□□□□ -0.08
ITGB4-202ENST00000449880 EIF3EP60228 445 aaKnown RBP14.57□□□□□ -0.08
ITGB4-202ENST00000449880 HERVK_113P62684 666 aa14.57□□□□□ -0.08
ITGB4-202ENST00000449880 CDKAL1Q5VV42 579 aa14.57□□□□□ -0.08
ITGB4-202ENST00000449880 CDR2LQ86X02 465 aaPredicted RBP14.57□□□□□ -0.08
ITGB4-202ENST00000449880 TMEM247A6NEH6 219 aa14.57□□□□□ -0.08
ITGB4-202ENST00000449880 EIF3DO15371 548 aaKnown RBP eCLIP14.57□□□□□ -0.08
ITGB4-202ENST00000449880 KLRK1P26718 216 aa14.57□□□□□ -0.08
ITGB4-202ENST00000449880 INPP5DQ92835 1189 aa14.57□□□□□ -0.08
ITGB4-202ENST00000449880 SENP7Q9BQF6 1050 aa14.57□□□□□ -0.08
ITGB4-202ENST00000449880 PARVBQ9HBI1 364 aa14.57□□□□□ -0.08
ITGB4-202ENST00000449880 ZNF212Q9UDV6 495 aa14.57□□□□□ -0.08
ITGB4-202ENST00000449880 TAGLN3Q9UI15 199 aa14.57□□□□□ -0.08
ITGB4-202ENST00000449880 AURKCQ9UQB9 309 aa14.57□□□□□ -0.08
ITGB4-202ENST00000449880 RASA1P20936 1047 aa14.57□□□□□ -0.08
ITGB4-202ENST00000449880 PIGHQ14442 188 aaPredicted RBP14.57□□□□□ -0.08
ITGB4-202ENST00000449880 LRRC36Q1X8D7 754 aa14.57□□□□□ -0.08
ITGB4-202ENST00000449880 BEST2Q8NFU1 509 aa14.57□□□□□ -0.08
ITGB4-202ENST00000449880 PIK3R5Q8WYR1 880 aa14.57□□□□□ -0.08
ITGB4-202ENST00000449880 VPS33BQ9H267 617 aa14.57□□□□□ -0.08
ITGB4-202ENST00000449880 OLA1Q9NTK5 396 aaKnown RBP14.57□□□□□ -0.08
ITGB4-202ENST00000449880 SMARCAL1Q9NZC9 954 aa14.57□□□□□ -0.08
ITGB4-202ENST00000449880 EMSYQ7Z589 1322 aa14.56□□□□□ -0.08
ITGB4-202ENST00000449880 TM9SF1O15321 606 aa14.56□□□□□ -0.08
ITGB4-202ENST00000449880 PSMC3P17980 439 aa14.56□□□□□ -0.08
ITGB4-202ENST00000449880 SDC4P31431 198 aa14.56□□□□□ -0.08
ITGB4-202ENST00000449880 TBX2Q13207 712 aaPredicted RBP14.56□□□□□ -0.08
ITGB4-202ENST00000449880 UGP2Q16851 508 aa14.56□□□□□ -0.08
ITGB4-202ENST00000449880 TTC33Q6PID6 262 aaPredicted RBP14.56□□□□□ -0.08
ITGB4-202ENST00000449880 TNIP2Q8NFZ5 429 aa14.56□□□□□ -0.08
ITGB4-202ENST00000449880 KRT35Q92764 455 aa14.56□□□□□ -0.08
ITGB4-202ENST00000449880 MAP3K14Q99558 947 aa14.56□□□□□ -0.08
ITGB4-202ENST00000449880 SIKE1Q9BRV8 207 aa14.56□□□□□ -0.08
ITGB4-202ENST00000449880 HACD3Q9P035 362 aa14.56□□□□□ -0.08
ITGB4-202ENST00000449880 HAO1Q9UJM8 370 aa14.56□□□□□ -0.08
ITGB4-202ENST00000449880 CNTNAP5Q8WYK1 1306 aa14.56□□□□□ -0.08
ITGB4-202ENST00000449880 C3P01024 1663 aa14.56□□□□□ -0.08
ITGB4-202ENST00000449880 TULP2O00295 520 aa14.56□□□□□ -0.08
ITGB4-202ENST00000449880 HMOX2P30519 316 aa14.56□□□□□ -0.08
ITGB4-202ENST00000449880 FMO5P49326 533 aa14.56□□□□□ -0.08
ITGB4-202ENST00000449880 SLC10A5Q5PT55 438 aa14.56□□□□□ -0.08
ITGB4-202ENST00000449880 STRIP1Q5VSL9 837 aa14.56□□□□□ -0.08
ITGB4-202ENST00000449880 ANKMY2Q8IV38 441 aa14.56□□□□□ -0.08
ITGB4-202ENST00000449880 C2orf40Q9H1Z8 148 aa14.56□□□□□ -0.08
ITGB4-202ENST00000449880 COG4Q9H9E3 785 aa14.56□□□□□ -0.08
ITGB4-202ENST00000449880 UTP6Q9NYH9 597 aaKnown RBP14.56□□□□□ -0.08
ITGB4-202ENST00000449880 POLIQ9UNA4 740 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms