RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 ZNF461Q8TAF7 563 aa12.87□□□□□ -0.35
LSP1P3-201ENST00000449530 GOLGA5Q8TBA6 731 aa12.87□□□□□ -0.35
LSP1P3-201ENST00000449530 CCDC127Q96BQ5 260 aa12.87□□□□□ -0.35
LSP1P3-201ENST00000449530 ANKRD36BP1Q96IX9 119 aa12.87□□□□□ -0.35
LSP1P3-201ENST00000449530 PGLYRP2Q96PD5 576 aa12.87□□□□□ -0.35
LSP1P3-201ENST00000449530 RHOBTB2Q9BYZ6 727 aa12.87□□□□□ -0.35
LSP1P3-201ENST00000449530 CYP4F11Q9HBI6 524 aa12.87□□□□□ -0.35
LSP1P3-201ENST00000449530 INTS13Q9NVM9 706 aa12.87□□□□□ -0.35
LSP1P3-201ENST00000449530 CGNQ9P2M7 1197 aaKnown RBP12.87□□□□□ -0.35
LSP1P3-201ENST00000449530 ITGA11Q9UKX5 1188 aa12.87□□□□□ -0.35
LSP1P3-201ENST00000449530 USTQ9Y2C2 406 aa12.87□□□□□ -0.35
LSP1P3-201ENST00000449530 OR6C75A6NL08 312 aa12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 KPNA7A9QM74 516 aa12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 CYB561D2O14569 222 aa12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 ABLIM3O94929 683 aa12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 SEC24AO95486 1093 aa12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 TNNC2P02585 160 aa12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 LRG1P02750 347 aa12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 ATF2P15336 505 aa12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 GBP2P32456 591 aaPredicted RBP12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 ELF1P32519 619 aa12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 PNPLA4P41247 253 aa12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 NTHL1P78549 312 aa12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 ADCY1Q08828 1119 aa12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 SNW1Q13573 536 aaKnown RBP12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 PSMD6Q15008 389 aa12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 SURF1Q15526 300 aa12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 PTPN21Q16825 1174 aa12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 TPGS2Q68CL5 300 aa12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 SCARA3Q6AZY7 606 aa12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 OTOP3Q7RTS5 596 aa12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 GRASPQ7Z6J2 395 aaPredicted RBP12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 METTL23Q86XA0 190 aa12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 WDR49Q8IV35 697 aa12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 CSGALNACT2Q8N6G5 542 aa12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 LRRC52Q8N7C0 313 aa12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 ENGASEQ8NFI3 743 aa12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 ACSF2Q96CM8 615 aaPredicted RBP12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 FNBP1Q96RU3 617 aa12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 CGRRF1Q99675 332 aa12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 KCTD10Q9H3F6 313 aa12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 HCFC1R1Q9NWW0 138 aa12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 SIX4Q9UIU6 781 aa12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 MAPK8IP1Q9UQF2 711 aa12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 INSL5Q9Y5Q6 135 aa12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 NOTCH4Q99466 2003 aa12.86□□□□□ -0.35
LSP1P3-201ENST00000449530 N4BP1O75113 896 aaKnown RBP12.85□□□□□ -0.35
LSP1P3-201ENST00000449530 KIF20AO95235 890 aa12.85□□□□□ -0.35
LSP1P3-201ENST00000449530 NR3C1P04150 777 aa12.85□□□□□ -0.35
LSP1P3-201ENST00000449530 CYP11A1P05108 521 aa12.85□□□□□ -0.35
LSP1P3-201ENST00000449530 ASGR2P07307 311 aa12.85□□□□□ -0.35
LSP1P3-201ENST00000449530 TNNI1P19237 187 aa12.85□□□□□ -0.35
LSP1P3-201ENST00000449530 RBP5P82980 135 aa12.85□□□□□ -0.35
LSP1P3-201ENST00000449530 KCNB1Q14721 858 aa12.85□□□□□ -0.35
LSP1P3-201ENST00000449530 UVSSAQ2YD98 709 aa12.85□□□□□ -0.35
LSP1P3-201ENST00000449530 WSCD1Q658N2 575 aa12.85□□□□□ -0.35
LSP1P3-201ENST00000449530 RNF19BQ6ZMZ0 732 aa12.85□□□□□ -0.35
LSP1P3-201ENST00000449530 TCEAL8Q8IYN2 117 aa12.85□□□□□ -0.35
LSP1P3-201ENST00000449530 SMYD4Q8IYR2 804 aaPredicted RBP12.85□□□□□ -0.35
LSP1P3-201ENST00000449530 ZDHHC14Q8IZN3 488 aa12.85□□□□□ -0.35
LSP1P3-201ENST00000449530 OR10T2Q8NGX3 314 aa12.85□□□□□ -0.35
LSP1P3-201ENST00000449530 CXorf38Q8TB03 319 aa12.85□□□□□ -0.35
LSP1P3-201ENST00000449530 ERCC4Q92889 916 aaPredicted RBP12.85□□□□□ -0.35
LSP1P3-201ENST00000449530 MYADMQ96S97 322 aa12.85□□□□□ -0.35
LSP1P3-201ENST00000449530 TMEM209Q96SK2 561 aa12.85□□□□□ -0.35
LSP1P3-201ENST00000449530 OXCT2Q9BYC2 517 aaPredicted RBP12.85□□□□□ -0.35
LSP1P3-201ENST00000449530 CHMP5Q9NZZ3 219 aa12.85□□□□□ -0.35
LSP1P3-201ENST00000449530 AFF4Q9UHB7 1163 aaKnown RBP12.85□□□□□ -0.35
LSP1P3-201ENST00000449530 DSEQ9UL01 958 aa12.85□□□□□ -0.35
LSP1P3-201ENST00000449530 R3HCC1Q9Y3T6 440 aaKnown RBP12.85□□□□□ -0.35
LSP1P3-201ENST00000449530 PDXKO00764 312 aa12.84□□□□□ -0.35
LSP1P3-201ENST00000449530 CALUO43852 315 aaPredicted RBP12.84□□□□□ -0.35
LSP1P3-201ENST00000449530 KINO60870 393 aaKnown RBP12.84□□□□□ -0.35
LSP1P3-201ENST00000449530 GADD45BO75293 160 aaPredicted RBP12.84□□□□□ -0.35
LSP1P3-201ENST00000449530 PRPF40AO75400 957 aaKnown RBP12.84□□□□□ -0.35
LSP1P3-201ENST00000449530 VNN2O95498 520 aa12.84□□□□□ -0.35
LSP1P3-201ENST00000449530 POU2F2P09086 479 aa12.84□□□□□ -0.35
LSP1P3-201ENST00000449530 FSHRP23945 695 aa12.84□□□□□ -0.35
LSP1P3-201ENST00000449530 CASP4P49662 377 aa12.84□□□□□ -0.35
LSP1P3-201ENST00000449530 CDR1P51861 262 aa12.84□□□□□ -0.35
LSP1P3-201ENST00000449530 MYBPC2Q14324 1141 aa12.84□□□□□ -0.35
LSP1P3-201ENST00000449530 DUOXA2Q1HG44 320 aa12.84□□□□□ -0.35
LSP1P3-201ENST00000449530 PABPC1LQ4VXU2 614 aaKnown RBP12.84□□□□□ -0.35
LSP1P3-201ENST00000449530 PLCD3Q8N3E9 789 aa12.84□□□□□ -0.35
LSP1P3-201ENST00000449530 PLEKHO2Q8TD55 490 aa12.84□□□□□ -0.35
LSP1P3-201ENST00000449530 BORCS6Q96GS4 357 aa12.84□□□□□ -0.35
LSP1P3-201ENST00000449530 RTP3Q9BQQ7 232 aa12.84□□□□□ -0.35
LSP1P3-201ENST00000449530 GZF1Q9H116 711 aaPredicted RBP12.84□□□□□ -0.35
LSP1P3-201ENST00000449530 LIMD1Q9UGP4 676 aa12.84□□□□□ -0.35
LSP1P3-201ENST00000449530 L1RE1Q9UN81 338 aa12.84□□□□□ -0.35
LSP1P3-201ENST00000449530 YIPF1Q9Y548 306 aa12.84□□□□□ -0.35
LSP1P3-201ENST00000449530 SNX9Q9Y5X1 595 aa12.84□□□□□ -0.35
LSP1P3-201ENST00000449530 MTMR11A4FU01 709 aa12.83□□□□□ -0.36
LSP1P3-201ENST00000449530 HUS1O60921 280 aa12.83□□□□□ -0.36
LSP1P3-201ENST00000449530 CLSTN1O94985 981 aa12.83□□□□□ -0.36
LSP1P3-201ENST00000449530 SMC2O95347 1197 aa12.83□□□□□ -0.36
LSP1P3-201ENST00000449530 TWF1Q12792 350 aa12.83□□□□□ -0.36
LSP1P3-201ENST00000449530 MYO1EQ12965 1108 aa12.83□□□□□ -0.36
LSP1P3-201ENST00000449530 GPR17Q13304 367 aa12.83□□□□□ -0.36
LSP1P3-201ENST00000449530 SLC39A12Q504Y0 691 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms