RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 MTG1Q9BT17 334 aaPredicted RBP11.27□□□□□ -0.6
VIPAS39-203ENST00000448935 ZNF518BQ9C0D4 1074 aa11.27□□□□□ -0.6
VIPAS39-203ENST00000448935 CARD9Q9H257 536 aa11.27□□□□□ -0.6
VIPAS39-203ENST00000448935 CYP3A43Q9HB55 503 aa11.27□□□□□ -0.6
VIPAS39-203ENST00000448935 MRPL47Q9HD33 250 aaKnown RBP11.27□□□□□ -0.6
VIPAS39-203ENST00000448935 ACP6Q9NPH0 428 aa11.27□□□□□ -0.6
VIPAS39-203ENST00000448935 CISHQ9NSE2 258 aa11.27□□□□□ -0.6
VIPAS39-203ENST00000448935 CNOT8Q9UFF9 292 aaKnown RBP11.27□□□□□ -0.6
VIPAS39-203ENST00000448935 LCMT1Q9UIC8 334 aa11.27□□□□□ -0.6
VIPAS39-203ENST00000448935 TTC7AQ9ULT0 858 aaPredicted RBP11.27□□□□□ -0.6
VIPAS39-203ENST00000448935 PACSIN2Q9UNF0 486 aaPredicted RBP11.27□□□□□ -0.6
VIPAS39-203ENST00000448935 USTQ9Y2C2 406 aa11.27□□□□□ -0.6
VIPAS39-203ENST00000448935 CEP83Q9Y592 693 aa11.27□□□□□ -0.6
VIPAS39-203ENST00000448935 CCDC188H7C350 402 aa11.27□□□□□ -0.61
VIPAS39-203ENST00000448935 MED7O43513 233 aa11.27□□□□□ -0.61
VIPAS39-203ENST00000448935 CEP104O60308 925 aa11.27□□□□□ -0.61
VIPAS39-203ENST00000448935 CSDE1O75534 798 aaKnown RBP11.27□□□□□ -0.61
VIPAS39-203ENST00000448935 C6orf222P0C671 652 aaPredicted RBP11.27□□□□□ -0.61
VIPAS39-203ENST00000448935 CYBAP13498 195 aa11.27□□□□□ -0.61
VIPAS39-203ENST00000448935 DNA2P51530 1060 aa11.27□□□□□ -0.61
VIPAS39-203ENST00000448935 CRYBB1P53674 252 aaPredicted RBP11.27□□□□□ -0.61
VIPAS39-203ENST00000448935 RBP5P82980 135 aa11.27□□□□□ -0.61
VIPAS39-203ENST00000448935 PURAQ00577 322 aaKnown RBP11.27□□□□□ -0.61
VIPAS39-203ENST00000448935 PPP2R5EQ16537 467 aa11.27□□□□□ -0.61
VIPAS39-203ENST00000448935 SLC10A6Q3KNW5 377 aa11.27□□□□□ -0.61
VIPAS39-203ENST00000448935 ARSIQ5FYB1 569 aa11.27□□□□□ -0.61
VIPAS39-203ENST00000448935 RSPH3Q86UC2 560 aa11.27□□□□□ -0.61
VIPAS39-203ENST00000448935 MCOLN2Q8IZK6 566 aa11.27□□□□□ -0.61
VIPAS39-203ENST00000448935 RASGEF1CQ8N431 466 aa11.27□□□□□ -0.61
VIPAS39-203ENST00000448935 USP38Q8NB14 1042 aa11.27□□□□□ -0.61
VIPAS39-203ENST00000448935 ADAMTS19Q8TE59 1207 aa11.27□□□□□ -0.61
VIPAS39-203ENST00000448935 KHSRPQ92945 711 aaKnown RBP eCLIP11.27□□□□□ -0.61
VIPAS39-203ENST00000448935 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.27□□□□□ -0.61
VIPAS39-203ENST00000448935 NUP85Q9BW27 656 aa11.27□□□□□ -0.61
VIPAS39-203ENST00000448935 PLVAPQ9BX97 442 aa11.27□□□□□ -0.61
VIPAS39-203ENST00000448935 XYLT2Q9H1B5 865 aa11.27□□□□□ -0.61
VIPAS39-203ENST00000448935 UPF3AQ9H1J1 476 aaKnown RBP11.27□□□□□ -0.61
VIPAS39-203ENST00000448935 WNT8AQ9H1J5 351 aa11.27□□□□□ -0.61
VIPAS39-203ENST00000448935 EPC1Q9H2F5 836 aa11.27□□□□□ -0.61
VIPAS39-203ENST00000448935 COG5Q9UP83 839 aa11.27□□□□□ -0.61
VIPAS39-203ENST00000448935 ALG6Q9Y672 507 aa11.27□□□□□ -0.61
VIPAS39-203ENST00000448935 SCINQ9Y6U3 715 aa11.27□□□□□ -0.61
VIPAS39-203ENST00000448935 M0QZ92 97 aa11.26□□□□□ -0.61
VIPAS39-203ENST00000448935 NPTXRO95502 500 aa11.26□□□□□ -0.61
VIPAS39-203ENST00000448935 NFICP08651 508 aa11.26□□□□□ -0.61
VIPAS39-203ENST00000448935 PAEPP09466 180 aa11.26□□□□□ -0.61
VIPAS39-203ENST00000448935 RARBP10826 455 aa11.26□□□□□ -0.61
VIPAS39-203ENST00000448935 HOXC8P31273 242 aa11.26□□□□□ -0.61
VIPAS39-203ENST00000448935 NOMO3P69849 1222 aa11.26□□□□□ -0.61
VIPAS39-203ENST00000448935 NKX3-2P78367 333 aa11.26□□□□□ -0.61
VIPAS39-203ENST00000448935 BEX3Q00994 111 aa11.26□□□□□ -0.61
VIPAS39-203ENST00000448935 NAA35Q5VZE5 725 aa11.26□□□□□ -0.61
VIPAS39-203ENST00000448935 C8orf74Q6P047 294 aa11.26□□□□□ -0.61
VIPAS39-203ENST00000448935 PHF13Q86YI8 300 aaPredicted RBP11.26□□□□□ -0.61
VIPAS39-203ENST00000448935 TMEM192Q8IY95 271 aa11.26□□□□□ -0.61
VIPAS39-203ENST00000448935 C1orf127Q8N9H9 656 aa11.26□□□□□ -0.61
VIPAS39-203ENST00000448935 TMEM35BQ8NCS4 154 aa11.26□□□□□ -0.61
VIPAS39-203ENST00000448935 DNAJB3Q8WWF6 145 aa11.26□□□□□ -0.61
VIPAS39-203ENST00000448935 ZNF606Q8WXB4 792 aa11.26□□□□□ -0.61
VIPAS39-203ENST00000448935 ELMO3Q96BJ8 720 aa11.26□□□□□ -0.61
VIPAS39-203ENST00000448935 OSMRQ99650 979 aa11.26□□□□□ -0.61
VIPAS39-203ENST00000448935 BCO2Q9BYV7 579 aa11.26□□□□□ -0.61
VIPAS39-203ENST00000448935 TRIM6Q9C030 488 aaPredicted RBP11.26□□□□□ -0.61
VIPAS39-203ENST00000448935 GINS2Q9Y248 185 aa11.26□□□□□ -0.61
VIPAS39-203ENST00000448935 UMODL1Q5DID0 1318 aa11.26□□□□□ -0.61
VIPAS39-203ENST00000448935 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.25□□□□□ -0.61
VIPAS39-203ENST00000448935 CCDC66A2RUB6 948 aa11.25□□□□□ -0.61
VIPAS39-203ENST00000448935 SEPT4O43236 478 aa11.25□□□□□ -0.61
VIPAS39-203ENST00000448935 TREHO43280 583 aa11.25□□□□□ -0.61
VIPAS39-203ENST00000448935 XPOTO43592 962 aaKnown RBP11.25□□□□□ -0.61
VIPAS39-203ENST00000448935 ZRANB2O95218 330 aaKnown RBP eCLIP11.25□□□□□ -0.61
VIPAS39-203ENST00000448935 TBC1D8O95759 1140 aa11.25□□□□□ -0.61
VIPAS39-203ENST00000448935 ITGB3P05106 788 aa11.25□□□□□ -0.61
VIPAS39-203ENST00000448935 CALB1P05937 261 aa11.25□□□□□ -0.61
VIPAS39-203ENST00000448935 CD58P19256 250 aa11.25□□□□□ -0.61
VIPAS39-203ENST00000448935 SLC1A1P43005 524 aa11.25□□□□□ -0.61
VIPAS39-203ENST00000448935 ASPAP45381 313 aa11.25□□□□□ -0.61
VIPAS39-203ENST00000448935 FLT3LGP49771 235 aa11.25□□□□□ -0.61
VIPAS39-203ENST00000448935 MYO1EQ12965 1108 aa11.25□□□□□ -0.61
VIPAS39-203ENST00000448935 MESDQ14696 234 aa11.25□□□□□ -0.61
VIPAS39-203ENST00000448935 SNX17Q15036 470 aa11.25□□□□□ -0.61
VIPAS39-203ENST00000448935 WDR72Q3MJ13 1102 aa11.25□□□□□ -0.61
VIPAS39-203ENST00000448935 GNASQ5JWF2 1037 aa11.25□□□□□ -0.61
VIPAS39-203ENST00000448935 CYP4F22Q6NT55 531 aa11.25□□□□□ -0.61
VIPAS39-203ENST00000448935 RUFY4Q6ZNE9 571 aa11.25□□□□□ -0.61
VIPAS39-203ENST00000448935 TRIB2Q92519 343 aa11.25□□□□□ -0.61
VIPAS39-203ENST00000448935 LENG1Q96BZ8 264 aaPredicted RBP11.25□□□□□ -0.61
VIPAS39-203ENST00000448935 CYFIP2Q96F07 1278 aa11.25□□□□□ -0.61
VIPAS39-203ENST00000448935 MS4A14Q96JA4 679 aa11.25□□□□□ -0.61
VIPAS39-203ENST00000448935 PNKPQ96T60 521 aa11.25□□□□□ -0.61
VIPAS39-203ENST00000448935 GOLPH3Q9H4A6 298 aa11.25□□□□□ -0.61
VIPAS39-203ENST00000448935 DPP3Q9NY33 737 aa11.25□□□□□ -0.61
VIPAS39-203ENST00000448935 ADAM22Q9P0K1 906 aa11.25□□□□□ -0.61
VIPAS39-203ENST00000448935 NXF1Q9UBU9 619 aaKnown RBP11.25□□□□□ -0.61
VIPAS39-203ENST00000448935 SIX4Q9UIU6 781 aa11.25□□□□□ -0.61
VIPAS39-203ENST00000448935 PCDHGC3Q9UN70 934 aa11.25□□□□□ -0.61
VIPAS39-203ENST00000448935 GOLGA6L10A0A0M3HER8 536 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 C3orf80F5H4A9 247 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 DDX3YO15523 660 aaKnown RBP11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 SPOPO43791 374 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms