RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 CCDC112Q8NEF3 446 aa20.89■□□□□ 0.94
SGCE-207ENST00000447873 APPL2Q8NEU8 664 aa20.89■□□□□ 0.94
SGCE-207ENST00000447873 ZNF830Q96NB3 372 aaPredicted RBP20.89■□□□□ 0.94
SGCE-207ENST00000447873 SLC9A7Q96T83 725 aa20.89■□□□□ 0.94
SGCE-207ENST00000447873 TMEM175Q9BSA9 504 aa20.89■□□□□ 0.94
SGCE-207ENST00000447873 ZBED2Q9BTP6 218 aa20.89■□□□□ 0.94
SGCE-207ENST00000447873 RC3H2Q9HBD1 1191 aaKnown RBP20.89■□□□□ 0.94
SGCE-207ENST00000447873 HCSTQ9UBK5 93 aa20.89■□□□□ 0.94
SGCE-207ENST00000447873 COL4A6Q14031 1691 aa20.89■□□□□ 0.93
SGCE-207ENST00000447873 CYB561D2O14569 222 aa20.89■□□□□ 0.93
SGCE-207ENST00000447873 IGFBP6P24592 240 aaPredicted RBP20.89■□□□□ 0.93
SGCE-207ENST00000447873 MAGEA10P43363 369 aaPredicted RBP20.89■□□□□ 0.93
SGCE-207ENST00000447873 MEA1Q16626 185 aa20.89■□□□□ 0.93
SGCE-207ENST00000447873 SOWAHAQ2M3V2 549 aa20.89■□□□□ 0.93
SGCE-207ENST00000447873 TTC39CQ8N584 583 aa20.89■□□□□ 0.93
SGCE-207ENST00000447873 TOP6BLQ8N6T0 577 aa20.89■□□□□ 0.93
SGCE-207ENST00000447873 UBR7Q8N806 425 aa20.89■□□□□ 0.93
SGCE-207ENST00000447873 PHOSPHO2Q8TCD6 241 aa20.89■□□□□ 0.93
SGCE-207ENST00000447873 HASPINQ8TF76 798 aa20.89■□□□□ 0.93
SGCE-207ENST00000447873 SENP8Q96LD8 212 aa20.89■□□□□ 0.93
SGCE-207ENST00000447873 COLEC11Q9BWP8 271 aa20.89■□□□□ 0.93
SGCE-207ENST00000447873 SDCBP2Q9H190 292 aa20.89■□□□□ 0.93
SGCE-207ENST00000447873 FAM124BQ9H5Z6 455 aaPredicted RBP20.89■□□□□ 0.93
SGCE-207ENST00000447873 FAN1Q9Y2M0 1017 aa20.89■□□□□ 0.93
SGCE-207ENST00000447873 TMEM189-UBE2V1I3L0A0 370 aa20.88■□□□□ 0.93
SGCE-207ENST00000447873 NRP1O14786 923 aa20.88■□□□□ 0.93
SGCE-207ENST00000447873 CYP26A1O43174 497 aa20.88■□□□□ 0.93
SGCE-207ENST00000447873 SERPING1P05155 500 aa20.88■□□□□ 0.93
SGCE-207ENST00000447873 SKILP12757 684 aa20.88■□□□□ 0.93
SGCE-207ENST00000447873 KLHL30Q0D2K2 578 aa20.88■□□□□ 0.93
SGCE-207ENST00000447873 SPOUT1Q5T280 376 aaKnown RBP20.88■□□□□ 0.93
SGCE-207ENST00000447873 CYP26C1Q6V0L0 522 aa20.88■□□□□ 0.93
SGCE-207ENST00000447873 DPH6Q7L8W6 267 aa20.88■□□□□ 0.93
SGCE-207ENST00000447873 IRF2BP2Q7Z5L9 587 aa20.88■□□□□ 0.93
SGCE-207ENST00000447873 F8W810 466 aa20.87■□□□□ 0.93
SGCE-207ENST00000447873 TADA2AO75478 443 aa20.87■□□□□ 0.93
SGCE-207ENST00000447873 ITGB1P05556 798 aa20.87■□□□□ 0.93
SGCE-207ENST00000447873 GALTP07902 379 aa20.87■□□□□ 0.93
SGCE-207ENST00000447873 ATP2A2P16615 1042 aaKnown RBP20.87■□□□□ 0.93
SGCE-207ENST00000447873 SLC11A1P49279 550 aa20.87■□□□□ 0.93
SGCE-207ENST00000447873 ALDH7A1P49419 539 aaKnown RBP20.87■□□□□ 0.93
SGCE-207ENST00000447873 AARSP49588 968 aaKnown RBP eCLIP20.87■□□□□ 0.93
SGCE-207ENST00000447873 BCAR1P56945 870 aa20.87■□□□□ 0.93
SGCE-207ENST00000447873 CDK17Q00537 523 aa20.87■□□□□ 0.93
SGCE-207ENST00000447873 TIGD5Q53EQ6 642 aa20.87■□□□□ 0.93
SGCE-207ENST00000447873 SMYD5Q6GMV2 418 aa20.87■□□□□ 0.93
SGCE-207ENST00000447873 CD300LGQ6UXG3 332 aa20.87■□□□□ 0.93
SGCE-207ENST00000447873 TMTC1Q8IUR5 882 aa20.87■□□□□ 0.93
SGCE-207ENST00000447873 HERC6Q8IVU3 1022 aa20.87■□□□□ 0.93
SGCE-207ENST00000447873 RBBP8NLQ8NC74 664 aaPredicted RBP20.87■□□□□ 0.93
SGCE-207ENST00000447873 CWH43Q9H720 699 aa20.87■□□□□ 0.93
SGCE-207ENST00000447873 CNTN6Q9UQ52 1028 aa20.87■□□□□ 0.93
SGCE-207ENST00000447873 BZW2Q9Y6E2 419 aaKnown RBP20.87■□□□□ 0.93
SGCE-207ENST00000447873 FECHP22830 423 aa20.86■□□□□ 0.93
SGCE-207ENST00000447873 CLCN1P35523 988 aa20.86■□□□□ 0.93
SGCE-207ENST00000447873 BRCC3P46736 316 aa20.86■□□□□ 0.93
SGCE-207ENST00000447873 INCA1Q0VD86 236 aa20.86■□□□□ 0.93
SGCE-207ENST00000447873 TDRD12Q587J7 1177 aaKnown RBP20.86■□□□□ 0.93
SGCE-207ENST00000447873 TMEM139Q8IV31 216 aa20.86■□□□□ 0.93
SGCE-207ENST00000447873 CHP1Q99653 195 aa20.86■□□□□ 0.93
SGCE-207ENST00000447873 MRPL45Q9BRJ2 306 aaKnown RBP20.86■□□□□ 0.93
SGCE-207ENST00000447873 KCNF1Q9H3M0 494 aa20.86■□□□□ 0.93
SGCE-207ENST00000447873 ADAM28Q9UKQ2 775 aa20.86■□□□□ 0.93
SGCE-207ENST00000447873 BARX2Q9UMQ3 279 aaPredicted RBP20.86■□□□□ 0.93
SGCE-207ENST00000447873 L1RE1Q9UN81 338 aa20.86■□□□□ 0.93
SGCE-207ENST00000447873 INSL6Q9Y581 213 aa20.86■□□□□ 0.93
SGCE-207ENST00000447873 I3L4J1 428 aa20.85■□□□□ 0.93
SGCE-207ENST00000447873 TRAPPC3O43617 180 aa20.85■□□□□ 0.93
SGCE-207ENST00000447873 CILPO75339 1184 aa20.85■□□□□ 0.93
SGCE-207ENST00000447873 TACC1O75410 805 aa20.85■□□□□ 0.93
SGCE-207ENST00000447873 ODC1P11926 461 aa20.85■□□□□ 0.93
SGCE-207ENST00000447873 PRKCIP41743 596 aa20.85■□□□□ 0.93
SGCE-207ENST00000447873 BPIFB4P59827 614 aa20.85■□□□□ 0.93
SGCE-207ENST00000447873 HTRA4P83105 476 aaPredicted RBP20.85■□□□□ 0.93
SGCE-207ENST00000447873 CCZ1BP86790 482 aa20.85■□□□□ 0.93
SGCE-207ENST00000447873 CCZ1P86791 482 aaPredicted RBP20.85■□□□□ 0.93
SGCE-207ENST00000447873 PTK2Q05397 1052 aa20.85■□□□□ 0.93
SGCE-207ENST00000447873 ZNF394Q53GI3 561 aa20.85■□□□□ 0.93
SGCE-207ENST00000447873 RASIP1Q5U651 963 aa20.85■□□□□ 0.93
SGCE-207ENST00000447873 HGSNATQ68CP4 663 aa20.85■□□□□ 0.93
SGCE-207ENST00000447873 LIMS2Q7Z4I7 341 aa20.85■□□□□ 0.93
SGCE-207ENST00000447873 ADGRF2Q8IZF7 708 aa20.85■□□□□ 0.93
SGCE-207ENST00000447873 PDCL2Q8N4E4 241 aa20.85■□□□□ 0.93
SGCE-207ENST00000447873 OR6B3Q8NGW1 331 aa20.85■□□□□ 0.93
SGCE-207ENST00000447873 SNX25Q9H3E2 840 aa20.85■□□□□ 0.93
SGCE-207ENST00000447873 HAUS4Q9H6D7 363 aa20.85■□□□□ 0.93
SGCE-207ENST00000447873 ARHGAP20Q9P2F6 1191 aa20.85■□□□□ 0.93
SGCE-207ENST00000447873 ARHGEF37A1IGU5 675 aa20.85■□□□□ 0.93
SGCE-207ENST00000447873 M0QZQ0 153 aa20.85■□□□□ 0.93
SGCE-207ENST00000447873 PLEKP08567 350 aaPredicted RBP20.85■□□□□ 0.93
SGCE-207ENST00000447873 PBX3P40426 434 aa20.85■□□□□ 0.93
SGCE-207ENST00000447873 PDE6CP51160 858 aa20.85■□□□□ 0.93
SGCE-207ENST00000447873 HS1BP3Q53T59 392 aa20.85■□□□□ 0.93
SGCE-207ENST00000447873 WSCD1Q658N2 575 aa20.85■□□□□ 0.93
SGCE-207ENST00000447873 SLC47A2Q86VL8 602 aa20.85■□□□□ 0.93
SGCE-207ENST00000447873 TMEM86AQ8N2M4 240 aa20.85■□□□□ 0.93
SGCE-207ENST00000447873 KBTBD7Q8WVZ9 684 aa20.85■□□□□ 0.93
SGCE-207ENST00000447873 SUSD3Q96L08 255 aa20.85■□□□□ 0.93
SGCE-207ENST00000447873 RAD9AQ99638 391 aa20.85■□□□□ 0.93
SGCE-207ENST00000447873 NHEJ1Q9H9Q4 299 aaPredicted RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms