RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 METTL23Q86XA0 190 aa26.94■■□□□ 1.9
UFD1-204ENST00000447868 SMYD4Q8IYR2 804 aaPredicted RBP26.94■■□□□ 1.9
UFD1-204ENST00000447868 CXorf38Q8TB03 319 aa26.94■■□□□ 1.9
UFD1-204ENST00000447868 BORCS6Q96GS4 357 aa26.94■■□□□ 1.9
UFD1-204ENST00000447868 RHOBTB2Q9BYZ6 727 aa26.94■■□□□ 1.9
UFD1-204ENST00000447868 CYP4F11Q9HBI6 524 aa26.94■■□□□ 1.9
UFD1-204ENST00000447868 MUTYHQ9UIF7 546 aa26.94■■□□□ 1.9
UFD1-204ENST00000447868 SIX4Q9UIU6 781 aa26.94■■□□□ 1.9
UFD1-204ENST00000447868 R3HCC1Q9Y3T6 440 aaKnown RBP26.94■■□□□ 1.9
UFD1-204ENST00000447868 CALUO43852 315 aaPredicted RBP26.93■■□□□ 1.9
UFD1-204ENST00000447868 PAPLNO95428 1278 aa26.93■■□□□ 1.9
UFD1-204ENST00000447868 UVSSAQ2YD98 709 aa26.93■■□□□ 1.9
UFD1-204ENST00000447868 RNF19BQ6ZMZ0 732 aa26.93■■□□□ 1.9
UFD1-204ENST00000447868 TDRD5Q8NAT2 981 aaKnown RBP26.93■■□□□ 1.9
UFD1-204ENST00000447868 MFSD14AQ96MC6 490 aa26.93■■□□□ 1.9
UFD1-204ENST00000447868 CGRRF1Q99675 332 aa26.93■■□□□ 1.9
UFD1-204ENST00000447868 OXCT2Q9BYC2 517 aaPredicted RBP26.93■■□□□ 1.9
UFD1-204ENST00000447868 WDR6Q9NNW5 1121 aaKnown RBP26.93■■□□□ 1.9
UFD1-204ENST00000447868 DMAC2Q9NW81 257 aa26.93■■□□□ 1.9
UFD1-204ENST00000447868 RMND1Q9NWS8 449 aa26.93■■□□□ 1.9
UFD1-204ENST00000447868 HOOK1Q9UJC3 728 aaKnown RBP26.93■■□□□ 1.9
UFD1-204ENST00000447868 DSEQ9UL01 958 aa26.93■■□□□ 1.9
UFD1-204ENST00000447868 CLUHO75153 1309 aa26.92■■□□□ 1.9
UFD1-204ENST00000447868 OR6C75A6NL08 312 aa26.92■■□□□ 1.9
UFD1-204ENST00000447868 KINO60870 393 aaKnown RBP26.92■■□□□ 1.9
UFD1-204ENST00000447868 SMC2O95347 1197 aa26.92■■□□□ 1.9
UFD1-204ENST00000447868 SEC24AO95486 1093 aa26.92■■□□□ 1.9
UFD1-204ENST00000447868 CYP11A1P05108 521 aa26.92■■□□□ 1.9
UFD1-204ENST00000447868 ATF2P15336 505 aa26.92■■□□□ 1.9
UFD1-204ENST00000447868 ADCY1Q08828 1119 aa26.92■■□□□ 1.9
UFD1-204ENST00000447868 WSCD1Q658N2 575 aa26.92■■□□□ 1.9
UFD1-204ENST00000447868 TPGS2Q68CL5 300 aa26.92■■□□□ 1.9
UFD1-204ENST00000447868 SLC9A9Q8IVB4 645 aa26.92■■□□□ 1.9
UFD1-204ENST00000447868 GUF1Q8N442 669 aaKnown RBP26.92■■□□□ 1.9
UFD1-204ENST00000447868 LRRC52Q8N7C0 313 aa26.92■■□□□ 1.9
UFD1-204ENST00000447868 SMARCE1Q969G3 411 aa26.92■■□□□ 1.9
UFD1-204ENST00000447868 PI4K2BG5E9Z4 385 aa26.91■■□□□ 1.9
UFD1-204ENST00000447868 XYLBO75191 536 aa26.91■■□□□ 1.9
UFD1-204ENST00000447868 PRPF40AO75400 957 aaKnown RBP26.91■■□□□ 1.9
UFD1-204ENST00000447868 HOXA9P31269 272 aa26.91■■□□□ 1.9
UFD1-204ENST00000447868 CASP4P49662 377 aa26.91■■□□□ 1.9
UFD1-204ENST00000447868 CEP135Q66GS9 1140 aa26.91■■□□□ 1.9
UFD1-204ENST00000447868 GRASPQ7Z6J2 395 aaPredicted RBP26.91■■□□□ 1.9
UFD1-204ENST00000447868 PGLYRP2Q96PD5 576 aa26.91■■□□□ 1.9
UFD1-204ENST00000447868 TMEM209Q96SK2 561 aa26.91■■□□□ 1.9
UFD1-204ENST00000447868 AFF4Q9UHB7 1163 aaKnown RBP26.91■■□□□ 1.9
UFD1-204ENST00000447868 TRAF3IP3Q9Y228 551 aa26.91■■□□□ 1.9
UFD1-204ENST00000447868 PCDHA5Q9Y5H7 936 aa26.91■■□□□ 1.9
UFD1-204ENST00000447868 DOCK6Q96HP0 2047 aa26.9■■□□□ 1.9
UFD1-204ENST00000447868 DCXO43602 365 aa26.9■■□□□ 1.9
UFD1-204ENST00000447868 OTOP3Q7RTS5 596 aa26.9■■□□□ 1.9
UFD1-204ENST00000447868 TRAPPC11Q7Z392 1133 aa26.9■■□□□ 1.9
UFD1-204ENST00000447868 TCEAL8Q8IYN2 117 aa26.9■■□□□ 1.9
UFD1-204ENST00000447868 OR10T2Q8NGX3 314 aa26.9■■□□□ 1.9
UFD1-204ENST00000447868 PLEKHO2Q8TD55 490 aa26.9■■□□□ 1.9
UFD1-204ENST00000447868 ACSF2Q96CM8 615 aaPredicted RBP26.9■■□□□ 1.9
UFD1-204ENST00000447868 GSDMAQ96QA5 445 aa26.9■■□□□ 1.9
UFD1-204ENST00000447868 GZF1Q9H116 711 aaPredicted RBP26.9■■□□□ 1.9
UFD1-204ENST00000447868 USTQ9Y2C2 406 aa26.9■■□□□ 1.9
UFD1-204ENST00000447868 LRG1P02750 347 aa26.89■■□□□ 1.9
UFD1-204ENST00000447868 ALADP13716 330 aa26.89■■□□□ 1.9
UFD1-204ENST00000447868 GBP2P32456 591 aaPredicted RBP26.89■■□□□ 1.9
UFD1-204ENST00000447868 NTHL1P78549 312 aa26.89■■□□□ 1.9
UFD1-204ENST00000447868 MYO1EQ12965 1108 aa26.89■■□□□ 1.9
UFD1-204ENST00000447868 MYBPC2Q14324 1141 aa26.89■■□□□ 1.9
UFD1-204ENST00000447868 RTL10Q7L3V2 364 aa26.89■■□□□ 1.9
UFD1-204ENST00000447868 THEM5Q8N1Q8 247 aa26.89■■□□□ 1.9
UFD1-204ENST00000447868 TMEM174Q8WUU8 243 aa26.89■■□□□ 1.9
UFD1-204ENST00000447868 ZNF516Q92618 1163 aa26.89■■□□□ 1.9
UFD1-204ENST00000447868 HPDLQ96IR7 371 aa26.89■■□□□ 1.9
UFD1-204ENST00000447868 HCFC1R1Q9NWW0 138 aa26.89■■□□□ 1.9
UFD1-204ENST00000447868 INSL5Q9Y5Q6 135 aa26.89■■□□□ 1.9
UFD1-204ENST00000447868 SNX9Q9Y5X1 595 aa26.89■■□□□ 1.9
UFD1-204ENST00000447868 HUS1O60921 280 aa26.88■■□□□ 1.89
UFD1-204ENST00000447868 CDR1P51861 262 aa26.88■■□□□ 1.89
UFD1-204ENST00000447868 GPR17Q13304 367 aa26.88■■□□□ 1.89
UFD1-204ENST00000447868 ZNF658Q5TYW1 1059 aaPredicted RBP26.88■■□□□ 1.89
UFD1-204ENST00000447868 GET4Q7L5D6 327 aaPredicted RBP26.88■■□□□ 1.89
UFD1-204ENST00000447868 PDCL2Q8N4E4 241 aa26.88■■□□□ 1.89
UFD1-204ENST00000447868 RTP3Q9BQQ7 232 aa26.88■■□□□ 1.89
UFD1-204ENST00000447868 LIMD1Q9UGP4 676 aa26.88■■□□□ 1.89
UFD1-204ENST00000447868 L1RE1Q9UN81 338 aa26.88■■□□□ 1.89
UFD1-204ENST00000447868 FRMD4BQ9Y2L6 1034 aa26.88■■□□□ 1.89
UFD1-204ENST00000447868 N4BP1O75113 896 aaKnown RBP26.87■■□□□ 1.89
UFD1-204ENST00000447868 VNN2O95498 520 aa26.87■■□□□ 1.89
UFD1-204ENST00000447868 FSHRP23945 695 aa26.87■■□□□ 1.89
UFD1-204ENST00000447868 NR2F2P24468 414 aa26.87■■□□□ 1.89
UFD1-204ENST00000447868 ZDHHC14Q8IZN3 488 aa26.87■■□□□ 1.89
UFD1-204ENST00000447868 PLCD3Q8N3E9 789 aa26.87■■□□□ 1.89
UFD1-204ENST00000447868 SPATA20Q8TB22 786 aa26.87■■□□□ 1.89
UFD1-204ENST00000447868 GDAP2Q9NXN4 497 aa26.87■■□□□ 1.89
UFD1-204ENST00000447868 LRRIQ3A6PVS8 624 aaPredicted RBP26.86■■□□□ 1.89
UFD1-204ENST00000447868 CST3P01034 146 aaPredicted RBP26.86■■□□□ 1.89
UFD1-204ENST00000447868 POU2F2P09086 479 aa26.86■■□□□ 1.89
UFD1-204ENST00000447868 PRCPP42785 496 aa26.86■■□□□ 1.89
UFD1-204ENST00000447868 UBE2HP62256 183 aa26.86■■□□□ 1.89
UFD1-204ENST00000447868 SLC39A12Q504Y0 691 aa26.86■■□□□ 1.89
UFD1-204ENST00000447868 ISM2Q6H9L7 571 aa26.86■■□□□ 1.89
UFD1-204ENST00000447868 PARD3BQ8TEW8 1205 aa26.86■■□□□ 1.89
UFD1-204ENST00000447868 MYADMQ96S97 322 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms