RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 MYBPC2Q14324 1141 aa12.83□□□□□ -0.36
RFC4-208ENST00000447345 NFIL3Q16649 462 aa12.83□□□□□ -0.36
RFC4-208ENST00000447345 LIN9Q5TKA1 542 aa12.83□□□□□ -0.36
RFC4-208ENST00000447345 TDRD10Q5VZ19 366 aaKnown RBP12.83□□□□□ -0.36
RFC4-208ENST00000447345 WSCD1Q658N2 575 aa12.83□□□□□ -0.36
RFC4-208ENST00000447345 CENPPQ6IPU0 288 aa12.83□□□□□ -0.36
RFC4-208ENST00000447345 ELMSAN1Q6PJG2 1045 aa12.83□□□□□ -0.36
RFC4-208ENST00000447345 LRRC52Q8N7C0 313 aa12.83□□□□□ -0.36
RFC4-208ENST00000447345 KREMEN2Q8NCW0 462 aa12.83□□□□□ -0.36
RFC4-208ENST00000447345 PARD3BQ8TEW8 1205 aa12.83□□□□□ -0.36
RFC4-208ENST00000447345 NELFBQ8WX92 580 aa12.83□□□□□ -0.36
RFC4-208ENST00000447345 ELMO3Q96BJ8 720 aa12.83□□□□□ -0.36
RFC4-208ENST00000447345 HPDLQ96IR7 371 aa12.83□□□□□ -0.36
RFC4-208ENST00000447345 GTPBP4Q9BZE4 634 aaKnown RBP12.83□□□□□ -0.36
RFC4-208ENST00000447345 FBXW11Q9UKB1 542 aa12.83□□□□□ -0.36
RFC4-208ENST00000447345 SNX9Q9Y5X1 595 aa12.83□□□□□ -0.36
RFC4-208ENST00000447345 A0A0C4DFX4 3053 aa12.82□□□□□ -0.36
RFC4-208ENST00000447345 VCANP13611 3396 aa12.82□□□□□ -0.36
RFC4-208ENST00000447345 PPP1R3GB7ZBB8 358 aa12.82□□□□□ -0.36
RFC4-208ENST00000447345 CETN3O15182 167 aa12.82□□□□□ -0.36
RFC4-208ENST00000447345 C8AP07357 584 aa12.82□□□□□ -0.36
RFC4-208ENST00000447345 EPB41P11171 864 aaKnown RBP12.82□□□□□ -0.36
RFC4-208ENST00000447345 HOXB8P17481 243 aaPredicted RBP12.82□□□□□ -0.36
RFC4-208ENST00000447345 TYMPP19971 482 aa12.82□□□□□ -0.36
RFC4-208ENST00000447345 CCNE1P24864 410 aa12.82□□□□□ -0.36
RFC4-208ENST00000447345 PSMC2P35998 433 aaKnown RBP12.82□□□□□ -0.36
RFC4-208ENST00000447345 VAMP7P51809 220 aa12.82□□□□□ -0.36
RFC4-208ENST00000447345 LRRC63Q05C16 580 aa12.82□□□□□ -0.36
RFC4-208ENST00000447345 MYO1EQ12965 1108 aa12.82□□□□□ -0.36
RFC4-208ENST00000447345 TRPC3Q13507 836 aa12.82□□□□□ -0.36
RFC4-208ENST00000447345 RAB33AQ14088 237 aa12.82□□□□□ -0.36
RFC4-208ENST00000447345 MRPL58Q14197 206 aaKnown RBP12.82□□□□□ -0.36
RFC4-208ENST00000447345 CBX2Q14781 532 aaPredicted RBP12.82□□□□□ -0.36
RFC4-208ENST00000447345 PUS10Q3MIT2 529 aaKnown RBP12.82□□□□□ -0.36
RFC4-208ENST00000447345 DCAF17Q5H9S7 520 aaPredicted RBP12.82□□□□□ -0.36
RFC4-208ENST00000447345 SLC8B1Q6J4K2 584 aa12.82□□□□□ -0.36
RFC4-208ENST00000447345 CES5AQ6NT32 575 aa12.82□□□□□ -0.36
RFC4-208ENST00000447345 LILRA6Q6PI73 481 aa12.82□□□□□ -0.36
RFC4-208ENST00000447345 INTS8Q75QN2 995 aaKnown RBP12.82□□□□□ -0.36
RFC4-208ENST00000447345 METTL23Q86XA0 190 aa12.82□□□□□ -0.36
RFC4-208ENST00000447345 TRIML1Q8N9V2 468 aa12.82□□□□□ -0.36
RFC4-208ENST00000447345 SLC7A14Q8TBB6 771 aa12.82□□□□□ -0.36
RFC4-208ENST00000447345 TMEM174Q8WUU8 243 aa12.82□□□□□ -0.36
RFC4-208ENST00000447345 BORCS6Q96GS4 357 aa12.82□□□□□ -0.36
RFC4-208ENST00000447345 DHTKD1Q96HY7 919 aaPredicted RBP12.82□□□□□ -0.36
RFC4-208ENST00000447345 PGLYRP2Q96PD5 576 aa12.82□□□□□ -0.36
RFC4-208ENST00000447345 TMEM209Q96SK2 561 aa12.82□□□□□ -0.36
RFC4-208ENST00000447345 S1PR5Q9H228 398 aa12.82□□□□□ -0.36
RFC4-208ENST00000447345 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.82□□□□□ -0.363e-6■■■■■ 108.7
RFC4-208ENST00000447345 L1RE1Q9UN81 338 aa12.82□□□□□ -0.36
RFC4-208ENST00000447345 FAM50BQ9Y247 325 aa12.82□□□□□ -0.36
RFC4-208ENST00000447345 NCOR1O75376 2440 aa12.82□□□□□ -0.36
RFC4-208ENST00000447345 NOTCH4Q99466 2003 aa12.81□□□□□ -0.36
RFC4-208ENST00000447345 DOCK8Q8NF50 2099 aa12.81□□□□□ -0.36
RFC4-208ENST00000447345 CCDC195A0A1B0GUA6 201 aa12.81□□□□□ -0.36
RFC4-208ENST00000447345 ARHGEF37A1IGU5 675 aa12.81□□□□□ -0.36
RFC4-208ENST00000447345 TBC1D4O60343 1298 aa12.81□□□□□ -0.36
RFC4-208ENST00000447345 HUS1O60921 280 aa12.81□□□□□ -0.36
RFC4-208ENST00000447345 CST3P01034 146 aaPredicted RBP12.81□□□□□ -0.36
RFC4-208ENST00000447345 PAX3P23760 479 aa12.81□□□□□ -0.36
RFC4-208ENST00000447345 PPP1R2P41236 205 aa12.81□□□□□ -0.36
RFC4-208ENST00000447345 PIK3CAP42336 1068 aa12.81□□□□□ -0.36
RFC4-208ENST00000447345 GCLMP48507 274 aa12.81□□□□□ -0.36
RFC4-208ENST00000447345 MYL6P60660 151 aa12.81□□□□□ -0.36
RFC4-208ENST00000447345 PAK1Q13153 545 aa12.81□□□□□ -0.36
RFC4-208ENST00000447345 SMAD2Q15796 467 aaKnown RBP12.81□□□□□ -0.36
RFC4-208ENST00000447345 PPM1LQ5SGD2 360 aa12.81□□□□□ -0.36
RFC4-208ENST00000447345 C1orf220Q5T0J3 134 aa12.81□□□□□ -0.36
RFC4-208ENST00000447345 TCERG1LQ5VWI1 586 aa12.81□□□□□ -0.36
RFC4-208ENST00000447345 SCARA5Q6ZMJ2 495 aa12.81□□□□□ -0.36
RFC4-208ENST00000447345 PDCL2Q8N4E4 241 aa12.81□□□□□ -0.36
RFC4-208ENST00000447345 OR10T2Q8NGX3 314 aa12.81□□□□□ -0.36
RFC4-208ENST00000447345 TMC2Q8TDI7 906 aa12.81□□□□□ -0.36
RFC4-208ENST00000447345 MMS19Q96T76 1030 aa12.81□□□□□ -0.36
RFC4-208ENST00000447345 UHRF1Q96T88 793 aaPredicted RBP12.81□□□□□ -0.36
RFC4-208ENST00000447345 ADAM7Q9H2U9 754 aa12.81□□□□□ -0.36
RFC4-208ENST00000447345 PIDD1Q9HB75 910 aa12.81□□□□□ -0.36
RFC4-208ENST00000447345 DPP7Q9UHL4 492 aa12.81□□□□□ -0.36
RFC4-208ENST00000447345 DSEQ9UL01 958 aa12.81□□□□□ -0.36
RFC4-208ENST00000447345 POLIQ9UNA4 740 aa12.81□□□□□ -0.36
RFC4-208ENST00000447345 TTC28Q96AY4 2481 aa12.81□□□□□ -0.36
RFC4-208ENST00000447345 OBSL1O75147 1896 aa12.8□□□□□ -0.36
RFC4-208ENST00000447345 BDP1A6H8Y1 2624 aa12.8□□□□□ -0.36
RFC4-208ENST00000447345 OR6C75A6NL08 312 aa12.8□□□□□ -0.36
RFC4-208ENST00000447345 PRRG1O14668 218 aa12.8□□□□□ -0.36
RFC4-208ENST00000447345 MAPK13O15264 365 aa12.8□□□□□ -0.36
RFC4-208ENST00000447345 SLC16A3O15427 465 aaKnown RBP12.8□□□□□ -0.36
RFC4-208ENST00000447345 CCL16O15467 120 aa12.8□□□□□ -0.36
RFC4-208ENST00000447345 HCRTO43612 131 aa12.8□□□□□ -0.36
RFC4-208ENST00000447345 ZMYND10O75800 440 aa12.8□□□□□ -0.36
RFC4-208ENST00000447345 OAZ2O95190 189 aa12.8□□□□□ -0.36
RFC4-208ENST00000447345 VNN1O95497 513 aa12.8□□□□□ -0.36
RFC4-208ENST00000447345 CYP11A1P05108 521 aa12.8□□□□□ -0.36
RFC4-208ENST00000447345 ACAT1P24752 427 aaKnown RBP12.8□□□□□ -0.36
RFC4-208ENST00000447345 ELF1P32519 619 aa12.8□□□□□ -0.36
RFC4-208ENST00000447345 TNNC1P63316 161 aa12.8□□□□□ -0.36
RFC4-208ENST00000447345 CLDN10P78369 228 aa12.8□□□□□ -0.36
RFC4-208ENST00000447345 FKBP3Q00688 224 aaKnown RBP12.8□□□□□ -0.36
RFC4-208ENST00000447345 ITIH3Q06033 890 aa12.8□□□□□ -0.36
RFC4-208ENST00000447345 PPP3CAQ08209 521 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms