RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 FEZF2Q8TBJ5 459 aa20.19■□□□□ 0.82
SDCBP-204ENST00000447182 INPP5DQ92835 1189 aa20.19■□□□□ 0.82
SDCBP-204ENST00000447182 TMEM237Q96Q45 408 aa20.19■□□□□ 0.82
SDCBP-204ENST00000447182 FHDC1Q9C0D6 1143 aaPredicted RBP20.19■□□□□ 0.82
SDCBP-204ENST00000447182 PXMP2Q9NR77 195 aa20.19■□□□□ 0.82
SDCBP-204ENST00000447182 PARVAQ9NVD7 372 aa20.19■□□□□ 0.82
SDCBP-204ENST00000447182 IP6K2Q9UHH9 426 aa20.19■□□□□ 0.82
SDCBP-204ENST00000447182 DNPEPQ9ULA0 475 aa20.19■□□□□ 0.82
SDCBP-204ENST00000447182 CHKBQ9Y259 395 aa20.19■□□□□ 0.82
SDCBP-204ENST00000447182 DRG1Q9Y295 367 aaKnown RBP20.19■□□□□ 0.82
SDCBP-204ENST00000447182 H0YCG3 227 aa20.18■□□□□ 0.82
SDCBP-204ENST00000447182 NDC80O14777 642 aa20.18■□□□□ 0.82
SDCBP-204ENST00000447182 SPAG7O75391 227 aa20.18■□□□□ 0.82
SDCBP-204ENST00000447182 DGAT1O75907 488 aa20.18■□□□□ 0.82
SDCBP-204ENST00000447182 DCTN3O75935 186 aa20.18■□□□□ 0.82
SDCBP-204ENST00000447182 CFHP08603 1231 aa20.18■□□□□ 0.82
SDCBP-204ENST00000447182 PIK3CAP42336 1068 aa20.18■□□□□ 0.82
SDCBP-204ENST00000447182 MCL1Q07820 350 aa20.18■□□□□ 0.82
SDCBP-204ENST00000447182 DNAJC3Q13217 504 aa20.18■□□□□ 0.82
SDCBP-204ENST00000447182 FLAD1Q8NFF5 587 aa20.18■□□□□ 0.82
SDCBP-204ENST00000447182 LPAR1Q92633 364 aa20.18■□□□□ 0.82
SDCBP-204ENST00000447182 BICD1Q96G01 975 aa20.18■□□□□ 0.82
SDCBP-204ENST00000447182 FAM84AQ96KN4 292 aa20.18■□□□□ 0.82
SDCBP-204ENST00000447182 LRRC37BQ96QE4 947 aa20.18■□□□□ 0.82
SDCBP-204ENST00000447182 FNBP1Q96RU3 617 aa20.18■□□□□ 0.82
SDCBP-204ENST00000447182 RMDN3Q96TC7 470 aa20.18■□□□□ 0.82
SDCBP-204ENST00000447182 PAIP2Q9BPZ3 127 aaKnown RBP20.18■□□□□ 0.82
SDCBP-204ENST00000447182 ZNF341Q9BYN7 854 aa20.18■□□□□ 0.82
SDCBP-204ENST00000447182 TMEM39BQ9GZU3 492 aa20.18■□□□□ 0.82
SDCBP-204ENST00000447182 RAVER2Q9HCJ3 691 aaKnown RBP20.18■□□□□ 0.82
SDCBP-204ENST00000447182 ALOX15BO15296 676 aa20.18■□□□□ 0.82
SDCBP-204ENST00000447182 ZNF862O60290 1169 aa20.18■□□□□ 0.82
SDCBP-204ENST00000447182 DKC1O60832 514 aaKnown RBP eCLIP20.18■□□□□ 0.82
SDCBP-204ENST00000447182 EDF1O60869 148 aaKnown RBP20.18■□□□□ 0.82
SDCBP-204ENST00000447182 TJP3O95049 919 aa20.18■□□□□ 0.82
SDCBP-204ENST00000447182 GNA15P30679 374 aa20.18■□□□□ 0.82
SDCBP-204ENST00000447182 LRRC38Q5VT99 294 aa20.18■□□□□ 0.82
SDCBP-204ENST00000447182 GLIS1Q8NBF1 620 aa20.18■□□□□ 0.82
SDCBP-204ENST00000447182 ERP27Q96DN0 273 aa20.18■□□□□ 0.82
SDCBP-204ENST00000447182 SLITRK1Q96PX8 696 aa20.18■□□□□ 0.82
SDCBP-204ENST00000447182 SMC6Q96SB8 1091 aa20.18■□□□□ 0.82
SDCBP-204ENST00000447182 GMLQ99445 158 aa20.18■□□□□ 0.82
SDCBP-204ENST00000447182 USTQ9Y2C2 406 aa20.18■□□□□ 0.82
SDCBP-204ENST00000447182 STYXL1Q9Y6J8 313 aa20.18■□□□□ 0.82
SDCBP-204ENST00000447182 VNN1O95497 513 aa20.17■□□□□ 0.82
SDCBP-204ENST00000447182 PECAM1P16284 738 aaPredicted RBP20.17■□□□□ 0.82
SDCBP-204ENST00000447182 TNNI1P19237 187 aa20.17■□□□□ 0.82
SDCBP-204ENST00000447182 ALDH3A1P30838 453 aa20.17■□□□□ 0.82
SDCBP-204ENST00000447182 PTPN7P35236 360 aa20.17■□□□□ 0.82
SDCBP-204ENST00000447182 PKN2Q16513 984 aaKnown RBP20.17■□□□□ 0.82
SDCBP-204ENST00000447182 MEX3CQ5U5Q3 659 aaKnown RBP20.17■□□□□ 0.82
SDCBP-204ENST00000447182 XRRA1Q6P2D8 792 aa20.17■□□□□ 0.82
SDCBP-204ENST00000447182 BZW1Q7L1Q6 419 aaKnown RBP20.17■□□□□ 0.82
SDCBP-204ENST00000447182 FAM83AQ86UY5 434 aa20.17■□□□□ 0.82
SDCBP-204ENST00000447182 VSIG1Q86XK7 387 aa20.17■□□□□ 0.82
SDCBP-204ENST00000447182 ATP6V0A1Q93050 837 aa20.17■□□□□ 0.82
SDCBP-204ENST00000447182 XPNPEP1Q9NQW7 623 aa20.17■□□□□ 0.82
SDCBP-204ENST00000447182 HOMER2Q9NSB8 354 aa20.17■□□□□ 0.82
SDCBP-204ENST00000447182 SLC24A2Q9UI40 661 aa20.17■□□□□ 0.82
SDCBP-204ENST00000447182 ZNF148Q9UQR1 794 aa20.17■□□□□ 0.82
SDCBP-204ENST00000447182 PCDHB4Q9Y5E5 795 aa20.17■□□□□ 0.82
SDCBP-204ENST00000447182 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.17■□□□□ 0.82
SDCBP-204ENST00000447182 ARSEP51690 589 aa20.17■□□□□ 0.82
SDCBP-204ENST00000447182 LMBRD2Q68DH5 695 aaPredicted RBP20.17■□□□□ 0.82
SDCBP-204ENST00000447182 SPOPLQ6IQ16 392 aa20.17■□□□□ 0.82
SDCBP-204ENST00000447182 PASD1Q8IV76 773 aa20.17■□□□□ 0.82
SDCBP-204ENST00000447182 KCNN1Q92952 543 aa20.17■□□□□ 0.82
SDCBP-204ENST00000447182 SSU72Q9NP77 194 aaKnown RBP20.17■□□□□ 0.82
SDCBP-204ENST00000447182 GABBR1Q9UBS5 961 aa20.17■□□□□ 0.82
SDCBP-204ENST00000447182 GRID1Q9ULK0 1009 aa20.17■□□□□ 0.82
SDCBP-204ENST00000447182 SHOC2Q9UQ13 582 aa20.17■□□□□ 0.82
SDCBP-204ENST00000447182 TESPA1A2RU30 521 aaPredicted RBP20.16■□□□□ 0.82
SDCBP-204ENST00000447182 HGSO14964 777 aaPredicted RBP20.16■□□□□ 0.82
SDCBP-204ENST00000447182 TYROBPO43914 113 aa20.16■□□□□ 0.82
SDCBP-204ENST00000447182 GJC1P36383 396 aa20.16■□□□□ 0.82
SDCBP-204ENST00000447182 SSR1P43307 286 aaKnown RBP20.16■□□□□ 0.82
SDCBP-204ENST00000447182 ANKRD20A2Q5SQ80 823 aa20.16■□□□□ 0.82
SDCBP-204ENST00000447182 ANKRD20A1Q5TYW2 823 aa20.16■□□□□ 0.82
SDCBP-204ENST00000447182 ANKRD20A3Q5VUR7 823 aa20.16■□□□□ 0.82
SDCBP-204ENST00000447182 TMEM270Q6UE05 265 aa20.16■□□□□ 0.82
SDCBP-204ENST00000447182 NLRX1Q86UT6 975 aa20.16■□□□□ 0.82
SDCBP-204ENST00000447182 APOBEC3GQ9HC16 384 aaKnown RBP20.16■□□□□ 0.82
SDCBP-204ENST00000447182 PGAP2Q9UHJ9 254 aa20.16■□□□□ 0.82
SDCBP-204ENST00000447182 TMEM191CA6NGB0 347 aa20.15■□□□□ 0.82
SDCBP-204ENST00000447182 POC1B-GALNT4F8VUJ3 575 aa20.15■□□□□ 0.82
SDCBP-204ENST00000447182 MAFGO15525 162 aa20.15■□□□□ 0.82
SDCBP-204ENST00000447182 TMEM191BP0C7N4 346 aa20.15■□□□□ 0.82
SDCBP-204ENST00000447182 KRT10P13645 584 aa20.15■□□□□ 0.82
SDCBP-204ENST00000447182 KRT15P19012 456 aa20.15■□□□□ 0.82
SDCBP-204ENST00000447182 TBXAS1P24557 533 aaPredicted RBP20.15■□□□□ 0.82
SDCBP-204ENST00000447182 RPA3P35244 121 aaPredicted RBP20.15■□□□□ 0.82
SDCBP-204ENST00000447182 LIG4P49917 911 aa20.15■□□□□ 0.82
SDCBP-204ENST00000447182 WNT7BP56706 349 aa20.15■□□□□ 0.82
SDCBP-204ENST00000447182 GPS1Q13098 491 aa20.15■□□□□ 0.82
SDCBP-204ENST00000447182 FASTKD3Q14CZ7 662 aaKnown RBP20.15■□□□□ 0.82
SDCBP-204ENST00000447182 OASLQ15646 514 aaKnown RBP20.15■□□□□ 0.82
SDCBP-204ENST00000447182 RNASEH2BQ5TBB1 312 aaKnown RBP20.15■□□□□ 0.82
SDCBP-204ENST00000447182 LRRC8CQ8TDW0 803 aa20.15■□□□□ 0.82
SDCBP-204ENST00000447182 C10orf82Q8WW14 230 aa20.15■□□□□ 0.82
SDCBP-204ENST00000447182 SPOCK2Q92563 424 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms